Protein–RNA interactions for Protein: P09547

SWI1, SWI/SNF chromatin-remodeling complex subunit SWI1, yeastyeast

Predictions only

Length 1,314 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWI1P09547 tT(AGU)HtT(AGU)H 73 nt0.91□□□□□ -2.26
SWI1P09547 tT(AGU)I1tT(AGU)I1 73 nt0.91□□□□□ -2.26
SWI1P09547 tT(AGU)I2tT(AGU)I2 73 nt0.91□□□□□ -2.26
SWI1P09547 tT(AGU)JtT(AGU)J 73 nt0.91□□□□□ -2.26
SWI1P09547 tT(AGU)N1tT(AGU)N1 73 nt0.91□□□□□ -2.26
SWI1P09547 tT(AGU)N2tT(AGU)N2 73 nt0.91□□□□□ -2.26
SWI1P09547 tT(AGU)O1tT(AGU)O1 73 nt0.91□□□□□ -2.26
SWI1P09547 tT(AGU)O2tT(AGU)O2 73 nt0.91□□□□□ -2.26
SWI1P09547 YPR153WYPR153W 423 nt0.91□□□□□ -2.26
SWI1P09547 AIM44YPL158C 2277 nt0.91□□□□□ -2.26
SWI1P09547 SAS3YBL052C 2496 nt0.91□□□□□ -2.26
SWI1P09547 RFX1YLR176C 2436 nt0.91□□□□□ -2.26
SWI1P09547 MPT5YGL178W 2580 nt0.91□□□□□ -2.26
SWI1P09547 YIL059CYIL059C 366 nt0.9□□□□□ -2.26
SWI1P09547 YDL073WYDL073W 2955 nt0.9□□□□□ -2.27
SWI1P09547 APL3YBL037W 3078 nt0.9□□□□□ -2.27
SWI1P09547 ENV11YGR071C 2583 nt0.9□□□□□ -2.27
SWI1P09547 YGR045CYGR045C 363 nt0.89□□□□□ -2.27
SWI1P09547 RPF1YHR088W 888 nt0.89□□□□□ -2.27
SWI1P09547 RPS27AYKL156W 249 nt0.89□□□□□ -2.27
SWI1P09547 SDH2YLL041C 801 nt0.89□□□□□ -2.27
SWI1P09547 RPL32YBL092W 393 nt0.89□□□□□ -2.27
SWI1P09547 YBR012CYBR012C 420 nt0.89□□□□□ -2.27
SWI1P09547 snR14snR14 160 nt0.89□□□□□ -2.27
SWI1P09547 NUT2YPR168W 474 nt0.89□□□□□ -2.27
SWI1P09547 YLL032CYLL032C 2478 nt0.89□□□□□ -2.27
SWI1P09547 KAP120YPL125W 3099 nt0.89□□□□□ -2.27
SWI1P09547 YDR269CYDR269C 324 nt0.89□□□□□ -2.27
SWI1P09547 YER087C-AYER087C-A 552 nt0.89□□□□□ -2.27
SWI1P09547 NBL1YHR199C-A 222 nt0.89□□□□□ -2.27
SWI1P09547 YAL016C-BYAL016C-B 186 nt0.89□□□□□ -2.27
SWI1P09547 snR189snR189 189 nt0.89□□□□□ -2.27
SWI1P09547 ALY2YJL084C 3141 nt0.88□□□□□ -2.27
SWI1P09547 SCW11YGL028C 1629 nt0.88□□□□□ -2.27
SWI1P09547 YHR139C-AYHR139C-A 312 nt0.88□□□□□ -2.27
SWI1P09547 YIL066W-AYIL066W-A 444 nt0.88□□□□□ -2.27
SWI1P09547 MRPL31YKL138C 396 nt0.88□□□□□ -2.27
SWI1P09547 YLR269CYLR269C 351 nt0.88□□□□□ -2.27
SWI1P09547 AI5_ALPHAQ0070 1893 nt0.87□□□□□ -2.27
SWI1P09547 YHR125WYHR125W 306 nt0.87□□□□□ -2.27
SWI1P09547 NFU1YKL040C 771 nt0.87□□□□□ -2.27
SWI1P09547 YKL145W-AYKL145W-A 93 nt0.87□□□□□ -2.27
SWI1P09547 UPS1YLR193C 528 nt0.87□□□□□ -2.27
SWI1P09547 RUF22RUF22 515 nt0.87□□□□□ -2.27
SWI1P09547 STB6YKL072W 2301 nt0.87□□□□□ -2.27
SWI1P09547 YER084W-AYER084W-A 513 nt0.86□□□□□ -2.27
SWI1P09547 YOL013W-BYOL013W-B 291 nt0.86□□□□□ -2.27
SWI1P09547 snR54snR54 86 nt0.86□□□□□ -2.27
SWI1P09547 EFR3YMR212C 2349 nt0.85□□□□□ -2.27
SWI1P09547 CDC39YCR093W 6327 nt0.85□□□□□ -2.27
SWI1P09547 YDR182W-AYDR182W-A 204 nt0.84□□□□□ -2.28
SWI1P09547 WIP1YDR374W-A 270 nt0.84□□□□□ -2.28
SWI1P09547 BI2Q0110 1272 nt0.84□□□□□ -2.28
SWI1P09547 YNL122CYNL122C 348 nt0.84□□□□□ -2.28
SWI1P09547 YBR200W-AYBR200W-A 165 nt0.84□□□□□ -2.28
SWI1P09547 MMS4YBR098W 2076 nt0.83□□□□□ -2.28
SWI1P09547 SEC1YDR164C 2175 nt0.83□□□□□ -2.28
SWI1P09547 YKL202WYKL202W 582 nt0.83□□□□□ -2.28
SWI1P09547 AIM29YKR074W 468 nt0.83□□□□□ -2.28
SWI1P09547 ZEO1YOL109W 342 nt0.83□□□□□ -2.28
SWI1P09547 YOR108C-AYOR108C-A 210 nt0.83□□□□□ -2.28
SWI1P09547 SET3YKR029C 2256 nt0.83□□□□□ -2.28
SWI1P09547 TIM13YGR181W 318 nt0.82□□□□□ -2.28
SWI1P09547 YGR290WYGR290W 444 nt0.82□□□□□ -2.28
SWI1P09547 RRT1YBL048W 312 nt0.82□□□□□ -2.28
SWI1P09547 PDE2YOR360C 1581 nt0.81□□□□□ -2.28
SWI1P09547 CYC7YEL039C 342 nt0.81□□□□□ -2.28
SWI1P09547 ECL1YGR146C 636 nt0.81□□□□□ -2.28
SWI1P09547 YBL071CYBL071C 309 nt0.81□□□□□ -2.28
SWI1P09547 YBR221W-AYBR221W-A 105 nt0.81□□□□□ -2.28
SWI1P09547 LCD1YDR499W 2244 nt0.81□□□□□ -2.28
SWI1P09547 SLI15YBR156C 2097 nt0.8□□□□□ -2.28
SWI1P09547 PRP16YKR086W 3216 nt0.8□□□□□ -2.28
SWI1P09547 YDL011CYDL011C 324 nt0.8□□□□□ -2.28
SWI1P09547 NPC2YDL046W 522 nt0.8□□□□□ -2.28
SWI1P09547 YLR171WYLR171W 390 nt0.8□□□□□ -2.28
SWI1P09547 YLR287CYLR287C 1068 nt0.8□□□□□ -2.28
SWI1P09547 ZIP2YGL249W 2115 nt0.79□□□□□ -2.28
SWI1P09547 YMR321CYMR321C 318 nt0.79□□□□□ -2.28
SWI1P09547 YOR199WYOR199W 330 nt0.79□□□□□ -2.28
SWI1P09547 STO1YMR125W 2586 nt0.79□□□□□ -2.28
SWI1P09547 RIM20YOR275C 1986 nt0.78□□□□□ -2.28
SWI1P09547 YMR290W-AYMR290W-A 348 nt0.78□□□□□ -2.28
SWI1P09547 DIE2YGR227W 1578 nt0.78□□□□□ -2.28
SWI1P09547 ULP2YIL031W 3105 nt0.77□□□□□ -2.29
SWI1P09547 PAN2YGL094C 3348 nt0.77□□□□□ -2.29
SWI1P09547 YNL303WYNL303W 348 nt0.77□□□□□ -2.29
SWI1P09547 CDC33YOL139C 642 nt0.77□□□□□ -2.29
SWI1P09547 YOR218CYOR218C 420 nt0.77□□□□□ -2.29
SWI1P09547 LTE1YAL024C 4308 nt0.76□□□□□ -2.29
SWI1P09547 YER006C-AYER006C-A 318 nt0.76□□□□□ -2.29
SWI1P09547 FYV7YLR068W 456 nt0.76□□□□□ -2.29
SWI1P09547 YDL206WYDL206W 2289 nt0.76□□□□□ -2.29
SWI1P09547 FMP27YLR454W 7887 nt0.75□□□□□ -2.29
SWI1P09547 AIM9YER080W 1884 nt0.75□□□□□ -2.29
SWI1P09547 YJL020W-AYJL020W-A 258 nt0.75□□□□□ -2.29
SWI1P09547 IRC23YOR044W 474 nt0.74□□□□□ -2.29
SWI1P09547 RPB10YOR210W 213 nt0.74□□□□□ -2.29
SWI1P09547 YPL261CYPL261C 309 nt0.74□□□□□ -2.29
SWI1P09547 RKR1YMR247C 4689 nt0.73□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 58.1 ms