Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.58■□□□□ 0.73
SNAP47Q5SQN1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.58■□□□□ 0.73
SNAP47Q5SQN1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.58■□□□□ 0.73
SNAP47Q5SQN1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNAP47Q5SQN1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 AL359736.2-201ENST00000621992 437 ntBASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 AC006557.6-201ENST00000623071 864 ntBASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNAP47Q5SQN1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 RPS2P4-201ENST00000476944 856 ntBASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNAP47Q5SQN1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 RPPH1-201ENST00000516869 333 ntBASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAP47Q5SQN1 AC011484.1-201ENST00000377652 1995 ntBASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 AC069544.1-201ENST00000609399 999 ntBASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNAP47Q5SQN1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms