Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 ISF1YMR081C 1017 nt1.65□□□□□ -2.15
VTA1Q06263 HMI1YOL095C 2121 nt1.64□□□□□ -2.15
VTA1Q06263 BRR2YER172C 6492 nt1.64□□□□□ -2.15
VTA1Q06263 YKL083WYKL083W 615 nt1.64□□□□□ -2.15
VTA1Q06263 FIG2YCR089W 4830 nt1.63□□□□□ -2.15
VTA1Q06263 HIT1YJR055W 495 nt1.63□□□□□ -2.15
VTA1Q06263 YPL229WYPL229W 621 nt1.63□□□□□ -2.15
VTA1Q06263 SKI3YPR189W 4299 nt1.63□□□□□ -2.15
VTA1Q06263 DCP2YNL118C 2913 nt1.63□□□□□ -2.15
VTA1Q06263 SWI6YLR182W 2412 nt1.62□□□□□ -2.15
VTA1Q06263 TRM3YDL112W 4311 nt1.62□□□□□ -2.15
VTA1Q06263 ZIP1YDR285W 2628 nt1.62□□□□□ -2.15
VTA1Q06263 KIP1YBL063W 3336 nt1.62□□□□□ -2.15
VTA1Q06263 SRP14YDL092W 441 nt1.62□□□□□ -2.15
VTA1Q06263 SAR1YPL218W 573 nt1.62□□□□□ -2.15
VTA1Q06263 KCS1YDR017C 3153 nt1.61□□□□□ -2.15
VTA1Q06263 YER137W-AYER137W-A 306 nt1.61□□□□□ -2.15
VTA1Q06263 YIL059CYIL059C 366 nt1.61□□□□□ -2.15
VTA1Q06263 SFB2YNL049C 2631 nt1.6□□□□□ -2.15
VTA1Q06263 CYC7YEL039C 342 nt1.6□□□□□ -2.15
VTA1Q06263 COA6YMR244C-A 315 nt1.6□□□□□ -2.15
VTA1Q06263 RFX1YLR176C 2436 nt1.6□□□□□ -2.15
VTA1Q06263 YGR109W-BYGR109W-B 4644 nt1.6□□□□□ -2.15
VTA1Q06263 EFR3YMR212C 2349 nt1.6□□□□□ -2.15
VTA1Q06263 YMR141W-AYMR141W-A 225 nt1.59□□□□□ -2.15
VTA1Q06263 YMR230W-AYMR230W-A 189 nt1.59□□□□□ -2.15
VTA1Q06263 MLH3YPL164C 2148 nt1.59□□□□□ -2.15
VTA1Q06263 NUP192YJL039C 5052 nt1.59□□□□□ -2.16
VTA1Q06263 RKM1YPL208W 1752 nt1.58□□□□□ -2.16
VTA1Q06263 YOR121CYOR121C 306 nt1.58□□□□□ -2.16
VTA1Q06263 PAU2YEL049W 363 nt1.57□□□□□ -2.16
VTA1Q06263 YGR174W-AYGR174W-A 87 nt1.57□□□□□ -2.16
VTA1Q06263 YHL037CYHL037C 402 nt1.57□□□□□ -2.16
VTA1Q06263 YJL022WYJL022W 309 nt1.57□□□□□ -2.16
VTA1Q06263 SPO24YPR036W-A 204 nt1.57□□□□□ -2.16
VTA1Q06263 YLR422WYLR422W 5799 nt1.57□□□□□ -2.16
VTA1Q06263 CTF4YPR135W 2784 nt1.57□□□□□ -2.16
VTA1Q06263 MEC1YBR136W 7107 nt1.57□□□□□ -2.16
VTA1Q06263 YOR019WYOR019W 2193 nt1.57□□□□□ -2.16
VTA1Q06263 YLL032CYLL032C 2478 nt1.56□□□□□ -2.16
VTA1Q06263 YHL041WYHL041W 450 nt1.56□□□□□ -2.16
VTA1Q06263 YPR012WYPR012W 255 nt1.56□□□□□ -2.16
VTA1Q06263 NUT2YPR168W 474 nt1.56□□□□□ -2.16
VTA1Q06263 ALK1YGL021W 2283 nt1.56□□□□□ -2.16
VTA1Q06263 DGR2YKL121W 2559 nt1.55□□□□□ -2.16
VTA1Q06263 EMC5YIL027C 426 nt1.55□□□□□ -2.16
VTA1Q06263 MRPL31YKL138C 396 nt1.55□□□□□ -2.16
VTA1Q06263 COF1YLL050C 432 nt1.55□□□□□ -2.16
VTA1Q06263 UPS1YLR193C 528 nt1.55□□□□□ -2.16
VTA1Q06263 YPR170W-AYPR170W-A 186 nt1.55□□□□□ -2.16
VTA1Q06263 ENV11YGR071C 2583 nt1.54□□□□□ -2.16
VTA1Q06263 PIG1YLR273C 1947 nt1.54□□□□□ -2.16
VTA1Q06263 ATG31YDR022C 591 nt1.54□□□□□ -2.16
VTA1Q06263 YBR174CYBR174C 315 nt1.54□□□□□ -2.16
VTA1Q06263 SSK2YNR031C 4740 nt1.54□□□□□ -2.16
VTA1Q06263 SLY1YDR189W 2001 nt1.53□□□□□ -2.16
VTA1Q06263 KAP122YGL016W 3246 nt1.53□□□□□ -2.16
VTA1Q06263 YIL102CYIL102C 306 nt1.53□□□□□ -2.16
VTA1Q06263 RPL40BYKR094C 387 nt1.53□□□□□ -2.16
VTA1Q06263 SBE22YHR103W 2559 nt1.53□□□□□ -2.17
VTA1Q06263 IRA1YBR140C 9279 nt1.52□□□□□ -2.17
VTA1Q06263 PAC1YOR269W 1485 nt1.52□□□□□ -2.17
VTA1Q06263 YLR334CYLR334C 381 nt1.52□□□□□ -2.17
VTA1Q06263 SMC4YLR086W 4257 nt1.52□□□□□ -2.17
VTA1Q06263 PMD1YER132C 5262 nt1.52□□□□□ -2.17
VTA1Q06263 YBP1YBR216C 2025 nt1.52□□□□□ -2.17
VTA1Q06263 MUK1YPL070W 1839 nt1.52□□□□□ -2.17
VTA1Q06263 BST1YFL025C 3090 nt1.51□□□□□ -2.17
VTA1Q06263 MVP1YMR004W 1536 nt1.51□□□□□ -2.17
VTA1Q06263 YDR182W-AYDR182W-A 204 nt1.51□□□□□ -2.17
VTA1Q06263 ANS1YHR126C 480 nt1.51□□□□□ -2.17
VTA1Q06263 VPS55YJR044C 423 nt1.51□□□□□ -2.17
VTA1Q06263 IRC23YOR044W 474 nt1.51□□□□□ -2.17
VTA1Q06263 NCA2YPR155C 1851 nt1.51□□□□□ -2.17
VTA1Q06263 CAT8YMR280C 4302 nt1.5□□□□□ -2.17
VTA1Q06263 CHS1YNL192W 3396 nt1.5□□□□□ -2.17
VTA1Q06263 UFD2YDL190C 2886 nt1.5□□□□□ -2.17
VTA1Q06263 RAD50YNL250W 3939 nt1.5□□□□□ -2.17
VTA1Q06263 YGL217CYGL217C 342 nt1.49□□□□□ -2.17
VTA1Q06263 YLR140WYLR140W 327 nt1.49□□□□□ -2.17
VTA1Q06263 YOR072W-AYOR072W-A 249 nt1.49□□□□□ -2.17
VTA1Q06263 CDC31YOR257W 486 nt1.49□□□□□ -2.17
VTA1Q06263 snR51snR51 107 nt1.49□□□□□ -2.17
VTA1Q06263 YJR003CYJR003C 1560 nt1.49□□□□□ -2.17
VTA1Q06263 SXM1YDR395W 2835 nt1.49□□□□□ -2.17
VTA1Q06263 AI5_ALPHAQ0070 1893 nt1.49□□□□□ -2.17
VTA1Q06263 APL2YKL135C 2181 nt1.49□□□□□ -2.17
VTA1Q06263 SAS3YBL052C 2496 nt1.48□□□□□ -2.17
VTA1Q06263 YGR035CYGR035C 351 nt1.48□□□□□ -2.17
VTA1Q06263 RPB10YOR210W 213 nt1.48□□□□□ -2.17
VTA1Q06263 YOR376WYOR376W 369 nt1.48□□□□□ -2.17
VTA1Q06263 SEC5YDR166C 2916 nt1.47□□□□□ -2.17
VTA1Q06263 TRM732YMR259C 4263 nt1.47□□□□□ -2.17
VTA1Q06263 YMR175W-AYMR175W-A 195 nt1.47□□□□□ -2.17
VTA1Q06263 TIM18YOR297C 579 nt1.47□□□□□ -2.17
VTA1Q06263 CCH1YGR217W 6120 nt1.46□□□□□ -2.18
VTA1Q06263 PET127YOR017W 2403 nt1.46□□□□□ -2.18
VTA1Q06263 HMRA1YCR097W 381 nt1.46□□□□□ -2.18
VTA1Q06263 snR72snR72 98 nt1.46□□□□□ -2.18
VTA1Q06263 PFD1YJL179W 330 nt1.46□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms