Protein–RNA interactions for Protein: Q06147

LCB5, Sphingoid long chain base kinase 5, yeastyeast

Known RBP Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB5Q06147 PRP5YBR237W 2550 nt3.27□□□□□ -1.89
LCB5Q06147 tF(GAA)DtF(GAA)D 73 nt3.27□□□□□ -1.89
LCB5Q06147 tF(GAA)NtF(GAA)N 73 nt3.27□□□□□ -1.89
LCB5Q06147 YMR31YFR049W 372 nt3.27□□□□□ -1.89
LCB5Q06147 RPS30BYOR182C 192 nt3.27□□□□□ -1.89
LCB5Q06147 MET10YFR030W 3108 nt3.26□□□□□ -1.89
LCB5Q06147 YAT2YER024W 2772 nt3.26□□□□□ -1.89
LCB5Q06147 STE11YLR362W 2154 nt3.25□□□□□ -1.89
LCB5Q06147 RPS28BYLR264W 204 nt3.25□□□□□ -1.89
LCB5Q06147 YNL018CYNL018C 1839 nt3.25□□□□□ -1.89
LCB5Q06147 DRS2YAL026C 4068 nt3.25□□□□□ -1.89
LCB5Q06147 YOR296WYOR296W 3870 nt3.25□□□□□ -1.89
LCB5Q06147 UBP14YBR058C 2346 nt3.25□□□□□ -1.89
LCB5Q06147 TAF2YCR042C 4224 nt3.24□□□□□ -1.89
LCB5Q06147 RPL23BYER117W 414 nt3.24□□□□□ -1.89
LCB5Q06147 QCR9YGR183C 201 nt3.24□□□□□ -1.89
LCB5Q06147 MPH1YIR002C 2982 nt3.24□□□□□ -1.89
LCB5Q06147 CAT2YML042W 2013 nt3.24□□□□□ -1.89
LCB5Q06147 PIP2YOR363C 2991 nt3.24□□□□□ -1.89
LCB5Q06147 SEF1YBL066C 3447 nt3.23□□□□□ -1.89
LCB5Q06147 YGL014C-AYGL014C-A 162 nt3.23□□□□□ -1.89
LCB5Q06147 POM152YMR129W 4014 nt3.23□□□□□ -1.89
LCB5Q06147 RPA190YOR341W 4995 nt3.23□□□□□ -1.89
LCB5Q06147 SWI6YLR182W 2412 nt3.22□□□□□ -1.89
LCB5Q06147 SKP2YNL311C 2292 nt3.22□□□□□ -1.89
LCB5Q06147 MNE1YOR350C 1992 nt3.22□□□□□ -1.89
LCB5Q06147 YOL083C-AYOL083C-A 141 nt3.22□□□□□ -1.89
LCB5Q06147 YBR109W-AYBR109W-A 225 nt3.22□□□□□ -1.89
LCB5Q06147 YHR080CYHR080C 4038 nt3.22□□□□□ -1.89
LCB5Q06147 DSE4YNR067C 3354 nt3.21□□□□□ -1.89
LCB5Q06147 STT4YLR305C 5703 nt3.21□□□□□ -1.9
LCB5Q06147 YDL025W-AYDL025W-A 105 nt3.21□□□□□ -1.9
LCB5Q06147 snR75snR75 89 nt3.21□□□□□ -1.9
LCB5Q06147 RPL42AYNL162W 321 nt3.21□□□□□ -1.9
LCB5Q06147 SOK1YDR006C 2706 nt3.21□□□□□ -1.9
LCB5Q06147 UTP14YML093W 2700 nt3.21□□□□□ -1.9
LCB5Q06147 VPS35YJL154C 2835 nt3.21□□□□□ -1.9
LCB5Q06147 SLM1YIL105C 2061 nt3.21□□□□□ -1.9
LCB5Q06147 IRC8YJL051W 2469 nt3.2□□□□□ -1.9
LCB5Q06147 TAO3YIL129C 7131 nt3.2□□□□□ -1.9
LCB5Q06147 COX12YLR038C 252 nt3.2□□□□□ -1.9
LCB5Q06147 FUN30YAL019W 3396 nt3.2□□□□□ -1.9
LCB5Q06147 NET1YJL076W 3570 nt3.2□□□□□ -1.9
LCB5Q06147 HSH155YMR288W 2916 nt3.2□□□□□ -1.9
LCB5Q06147 PSK1YAL017W 4071 nt3.19□□□□□ -1.9
LCB5Q06147 YLL054CYLL054C 2532 nt3.19□□□□□ -1.9
LCB5Q06147 POL3YDL102W 3294 nt3.19□□□□□ -1.9
LCB5Q06147 NTO1YPR031W 2247 nt3.19□□□□□ -1.9
LCB5Q06147 SBE22YHR103W 2559 nt3.18□□□□□ -1.9
LCB5Q06147 RPH1YER169W 2391 nt3.18□□□□□ -1.9
LCB5Q06147 RGR1YLR071C 3249 nt3.18□□□□□ -1.9
LCB5Q06147 RPS12YOR369C 432 nt3.18□□□□□ -1.9
LCB5Q06147 snR39BsnR39B 96 nt3.18□□□□□ -1.9
LCB5Q06147 MOT1YPL082C 5604 nt3.18□□□□□ -1.9
LCB5Q06147 SAK1YER129W 3429 nt3.18□□□□□ -1.9
LCB5Q06147 ESL1YIL151C 3357 nt3.17□□□□□ -1.9
LCB5Q06147 NPR3YHL023C 3441 nt3.17□□□□□ -1.9
LCB5Q06147 MBB1YJL199C 327 nt3.17□□□□□ -1.9
LCB5Q06147 YMR175W-AYMR175W-A 195 nt3.17□□□□□ -1.9
LCB5Q06147 FLO1YAR050W 4614 nt3.16□□□□□ -1.9
LCB5Q06147 YBL071C-BYBL071C-B 99 nt3.16□□□□□ -1.9
LCB5Q06147 INP52YNL106C 3552 nt3.16□□□□□ -1.9
LCB5Q06147 PSK2YOL045W 3306 nt3.16□□□□□ -1.9
LCB5Q06147 SNF5YBR289W 2718 nt3.16□□□□□ -1.9
LCB5Q06147 PMR1YGL167C 2853 nt3.16□□□□□ -1.9
LCB5Q06147 TFC4YGR047C 3078 nt3.16□□□□□ -1.9
LCB5Q06147 SNQ2YDR011W 4506 nt3.15□□□□□ -1.9
LCB5Q06147 CHO2YGR157W 2610 nt3.15□□□□□ -1.9
LCB5Q06147 ITC1YGL133W 3795 nt3.15□□□□□ -1.9
LCB5Q06147 YGL182CYGL182C 324 nt3.14□□□□□ -1.91
LCB5Q06147 YHR073W-AYHR073W-A 177 nt3.14□□□□□ -1.91
LCB5Q06147 YNL114CYNL114C 372 nt3.14□□□□□ -1.91
LCB5Q06147 PSY2YNL201C 2577 nt3.13□□□□□ -1.91
LCB5Q06147 DBP10YDL031W 2988 nt3.13□□□□□ -1.91
LCB5Q06147 HMI1YOL095C 2121 nt3.13□□□□□ -1.91
LCB5Q06147 MDM1YML104C 3384 nt3.13□□□□□ -1.91
LCB5Q06147 STB6YKL072W 2301 nt3.13□□□□□ -1.91
LCB5Q06147 MAK21YDR060W 3078 nt3.13□□□□□ -1.91
LCB5Q06147 LCL1YPL056C 306 nt3.13□□□□□ -1.91
LCB5Q06147 YBR072C-AYBR072C-A 162 nt3.13□□□□□ -1.91
LCB5Q06147 PUT3YKL015W 2940 nt3.13□□□□□ -1.91
LCB5Q06147 SPO14YKR031C 5052 nt3.13□□□□□ -1.91
LCB5Q06147 SET2YJL168C 2202 nt3.12□□□□□ -1.91
LCB5Q06147 BUD4YJR092W 4344 nt3.12□□□□□ -1.91
LCB5Q06147 SEC7YDR170C 6030 nt3.11□□□□□ -1.91
LCB5Q06147 snR64snR64 101 nt3.11□□□□□ -1.91
LCB5Q06147 snR50snR50 90 nt3.11□□□□□ -1.91
LCB5Q06147 SCH9YHR205W 2475 nt3.11□□□□□ -1.91
LCB5Q06147 SIN3YOL004W 4611 nt3.1□□□□□ -1.91
LCB5Q06147 tQ(UUG)BtQ(UUG)B 72 nt3.1□□□□□ -1.91
LCB5Q06147 YIL002W-AYIL002W-A 210 nt3.1□□□□□ -1.91
LCB5Q06147 GLG1YKR058W 1851 nt3.09□□□□□ -1.91
LCB5Q06147 YFR016CYFR016C 3702 nt3.09□□□□□ -1.91
LCB5Q06147 YDR354C-AYDR354C-A 144 nt3.09□□□□□ -1.91
LCB5Q06147 YLR278CYLR278C 4026 nt3.09□□□□□ -1.92
LCB5Q06147 ORC1YML065W 2745 nt3.08□□□□□ -1.92
LCB5Q06147 YKU80YMR106C 1890 nt3.08□□□□□ -1.92
LCB5Q06147 YGR240C-AYGR240C-A 201 nt3.08□□□□□ -1.92
LCB5Q06147 RGC1YPR115W 3252 nt3.08□□□□□ -1.92
LCB5Q06147 APL1YJR005W 2103 nt3.07□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 39.4 ms