Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 DBP10YDL031W 2988 nt3.2□□□□□ -1.9
CAF120P53836 MPH1YIR002C 2982 nt3.2□□□□□ -1.9
CAF120P53836 SOK1YDR006C 2706 nt3.2□□□□□ -1.9
CAF120P53836 RCY1YJL204C 2523 nt3.19□□□□□ -1.9
CAF120P53836 RPA190YOR341W 4995 nt3.19□□□□□ -1.9
CAF120P53836 RPS21AYKR057W 264 nt3.19□□□□□ -1.9
CAF120P53836 REC8YPR007C 2043 nt3.18□□□□□ -1.9
CAF120P53836 YAT2YER024W 2772 nt3.18□□□□□ -1.9
CAF120P53836 SNT1YCR033W 3681 nt3.18□□□□□ -1.9
CAF120P53836 VPS35YJL154C 2835 nt3.18□□□□□ -1.9
CAF120P53836 SEF1YBL066C 3447 nt3.18□□□□□ -1.9
CAF120P53836 STE11YLR362W 2154 nt3.17□□□□□ -1.9
CAF120P53836 YDR521WYDR521W 336 nt3.17□□□□□ -1.9
CAF120P53836 YGL014C-AYGL014C-A 162 nt3.17□□□□□ -1.9
CAF120P53836 PRP5YBR237W 2550 nt3.17□□□□□ -1.9
CAF120P53836 UTP14YML093W 2700 nt3.17□□□□□ -1.9
CAF120P53836 SWI6YLR182W 2412 nt3.17□□□□□ -1.9
CAF120P53836 YNL018CYNL018C 1839 nt3.16□□□□□ -1.9
CAF120P53836 YCR038W-AYCR038W-A 126 nt3.16□□□□□ -1.9
CAF120P53836 BUB1YGR188C 3066 nt3.16□□□□□ -1.9
CAF120P53836 YIL080WYIL080W 4722 nt3.15□□□□□ -1.9
CAF120P53836 PIP2YOR363C 2991 nt3.15□□□□□ -1.9
CAF120P53836 RPL23BYER117W 414 nt3.15□□□□□ -1.91
CAF120P53836 RPS30BYOR182C 192 nt3.15□□□□□ -1.91
CAF120P53836 RGR1YLR071C 3249 nt3.15□□□□□ -1.91
CAF120P53836 SLM1YIL105C 2061 nt3.15□□□□□ -1.91
CAF120P53836 RPN1YHR027C 2982 nt3.15□□□□□ -1.91
CAF120P53836 MNE1YOR350C 1992 nt3.14□□□□□ -1.91
CAF120P53836 HSH155YMR288W 2916 nt3.14□□□□□ -1.91
CAF120P53836 FAR1YJL157C 2493 nt3.14□□□□□ -1.91
CAF120P53836 MET10YFR030W 3108 nt3.14□□□□□ -1.91
CAF120P53836 RPH1YER169W 2391 nt3.14□□□□□ -1.91
CAF120P53836 YDL025W-AYDL025W-A 105 nt3.14□□□□□ -1.91
CAF120P53836 YKR075W-AYKR075W-A 270 nt3.14□□□□□ -1.91
CAF120P53836 SPO71YDR104C 3738 nt3.14□□□□□ -1.91
CAF120P53836 CIN8YEL061C 3003 nt3.14□□□□□ -1.91
CAF120P53836 YHR080CYHR080C 4038 nt3.13□□□□□ -1.91
CAF120P53836 IRC8YJL051W 2469 nt3.13□□□□□ -1.91
CAF120P53836 QCR9YGR183C 201 nt3.12□□□□□ -1.91
CAF120P53836 COX12YLR038C 252 nt3.12□□□□□ -1.91
CAF120P53836 ROM1YGR070W 3468 nt3.12□□□□□ -1.91
CAF120P53836 NTO1YPR031W 2247 nt3.12□□□□□ -1.91
CAF120P53836 NET1YJL076W 3570 nt3.11□□□□□ -1.91
CAF120P53836 RPL42AYNL162W 321 nt3.11□□□□□ -1.91
CAF120P53836 YBR109W-AYBR109W-A 225 nt3.11□□□□□ -1.91
CAF120P53836 PSY2YNL201C 2577 nt3.11□□□□□ -1.91
CAF120P53836 TSC11YER093C 4293 nt3.11□□□□□ -1.91
CAF120P53836 FLO5YHR211W 3228 nt3.11□□□□□ -1.91
CAF120P53836 POL2YNL262W 6669 nt3.1□□□□□ -1.91
CAF120P53836 STT4YLR305C 5703 nt3.1□□□□□ -1.91
CAF120P53836 YSP2YDR326C 4317 nt3.09□□□□□ -1.91
CAF120P53836 YNL114CYNL114C 372 nt3.09□□□□□ -1.91
CAF120P53836 SNF5YBR289W 2718 nt3.09□□□□□ -1.92
CAF120P53836 YTA7YGR270W 4140 nt3.09□□□□□ -1.92
CAF120P53836 YMR317WYMR317W 3423 nt3.09□□□□□ -1.92
CAF120P53836 SBE22YHR103W 2559 nt3.08□□□□□ -1.92
CAF120P53836 PUT3YKL015W 2940 nt3.08□□□□□ -1.92
CAF120P53836 ITC1YGL133W 3795 nt3.07□□□□□ -1.92
CAF120P53836 PSK2YOL045W 3306 nt3.07□□□□□ -1.92
CAF120P53836 CAT2YML042W 2013 nt3.07□□□□□ -1.92
CAF120P53836 YLL054CYLL054C 2532 nt3.07□□□□□ -1.92
CAF120P53836 NPR3YHL023C 3441 nt3.06□□□□□ -1.92
CAF120P53836 YME2YMR302C 2553 nt3.06□□□□□ -1.92
CAF120P53836 YOR296WYOR296W 3870 nt3.05□□□□□ -1.92
CAF120P53836 YGL182CYGL182C 324 nt3.05□□□□□ -1.92
CAF120P53836 YMR175W-AYMR175W-A 195 nt3.05□□□□□ -1.92
CAF120P53836 YOL083C-AYOL083C-A 141 nt3.05□□□□□ -1.92
CAF120P53836 snR39BsnR39B 96 nt3.05□□□□□ -1.92
CAF120P53836 ORC1YML065W 2745 nt3.05□□□□□ -1.92
CAF120P53836 STB6YKL072W 2301 nt3.04□□□□□ -1.92
CAF120P53836 YIL082W-AYIL082W-A 4497 nt3.04□□□□□ -1.92
CAF120P53836 PTP3YER075C 2787 nt3.04□□□□□ -1.92
CAF120P53836 snR70snR70 164 nt3.04□□□□□ -1.92
CAF120P53836 YHR073W-AYHR073W-A 177 nt3.04□□□□□ -1.92
CAF120P53836 YIL002W-AYIL002W-A 210 nt3.04□□□□□ -1.92
CAF120P53836 SET2YJL168C 2202 nt3.04□□□□□ -1.92
CAF120P53836 HMI1YOL095C 2121 nt3.04□□□□□ -1.92
CAF120P53836 CHO2YGR157W 2610 nt3.03□□□□□ -1.92
CAF120P53836 snR75snR75 89 nt3.03□□□□□ -1.92
CAF120P53836 YBL071C-BYBL071C-B 99 nt3.03□□□□□ -1.92
CAF120P53836 ATG11YPR049C 3537 nt3.03□□□□□ -1.92
CAF120P53836 YKU80YMR106C 1890 nt3.03□□□□□ -1.93
CAF120P53836 IKI3YLR384C 4050 nt3.02□□□□□ -1.93
CAF120P53836 RGC1YPR115W 3252 nt3.02□□□□□ -1.93
CAF120P53836 YBR072C-AYBR072C-A 162 nt3.02□□□□□ -1.93
CAF120P53836 SPO14YKR031C 5052 nt3.02□□□□□ -1.93
CAF120P53836 FUN30YAL019W 3396 nt3.02□□□□□ -1.93
CAF120P53836 UBP14YBR058C 2346 nt3.02□□□□□ -1.93
CAF120P53836 SNQ2YDR011W 4506 nt3.01□□□□□ -1.93
CAF120P53836 SCH9YHR205W 2475 nt3.01□□□□□ -1.93
CAF120P53836 CHS2YBR038W 2892 nt3.01□□□□□ -1.93
CAF120P53836 MET6YER091C 2304 nt3.01□□□□□ -1.93
CAF120P53836 FLO1YAR050W 4614 nt3□□□□□ -1.93
CAF120P53836 BUD4YJR092W 4344 nt3□□□□□ -1.93
CAF120P53836 DUG2YBR281C 2637 nt2.99□□□□□ -1.93
CAF120P53836 RRP6YOR001W 2202 nt2.99□□□□□ -1.93
CAF120P53836 UBP11YKR098C 2154 nt2.99□□□□□ -1.93
CAF120P53836 TAO3YIL129C 7131 nt2.99□□□□□ -1.93
CAF120P53836 RAD34YDR314C 2079 nt2.99□□□□□ -1.93
CAF120P53836 CSR2YPR030W 3366 nt2.98□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 30.8 ms