Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 MYO18A-217ENST00000533652 542 ntTSL 515.78■□□□□ 0.124e-6■■□□□ 13.1
AARSP49588 SMC1A-204ENST00000463684 880 ntTSL 215.72■□□□□ 0.114e-11■■□□□ 13.1
AARSP49588 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.66■□□□□ 0.14e-6■■□□□ 13.1
AARSP49588 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.094e-6■■□□□ 13.1
AARSP49588 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.51■□□□□ 0.074e-6■■□□□ 13.1
AARSP49588 TAF1D-201ENST00000323981 2540 ntTSL 215.48■□□□□ 0.074e-6■■□□□ 13.1
AARSP49588 PCNX3-202ENST00000439247 3104 ntTSL 1 (best)15.25■□□□□ 0.034e-6■■□□□ 13.1
AARSP49588 EIF4G1-235ENST00000482303 493 ntTSL 215.2■□□□□ 0.024e-6■■□□□ 13.1
AARSP49588 EMD-209ENST00000494443 765 ntTSL 215.1■□□□□ 0.014e-6■■□□□ 13.1
AARSP49588 DDX41-206ENST00000506965 560 ntTSL 514.62□□□□□ -0.074e-6■■□□□ 13.1
AARSP49588 DDX41-210ENST00000509576 819 ntTSL 314.62□□□□□ -0.074e-6■■□□□ 13.1
AARSP49588 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.074e-6■■□□□ 13.1
AARSP49588 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.114e-6■■□□□ 13.1
AARSP49588 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.164e-6■■□□□ 13.1
AARSP49588 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.164e-6■■□□□ 13.1
AARSP49588 MYO18A-207ENST00000530254 6479 ntTSL 1 (best)13.98□□□□□ -0.174e-6■■□□□ 13.1
AARSP49588 MYO9B-207ENST00000595641 6215 ntTSL 513.93□□□□□ -0.184e-6■■□□□ 13.1
AARSP49588 DDX41-215ENST00000512431 904 ntTSL 513.63□□□□□ -0.234e-6■■□□□ 13.1
AARSP49588 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC13.34□□□□□ -0.274e-6■■□□□ 13.1
AARSP49588 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC13.26□□□□□ -0.294e-6■■□□□ 13.1
AARSP49588 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC13.13□□□□□ -0.314e-6■■□□□ 13.1
AARSP49588 THAP9-AS1-202ENST00000504520 2770 ntTSL 1 (best) BASIC13.11□□□□□ -0.314e-6■■□□□ 13.1
AARSP49588 DHX15-201ENST00000336812 2994 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.44e-6■■□□□ 13.1
AARSP49588 DDX41-219ENST00000629036 606 ntTSL 4 BASIC12.09□□□□□ -0.474e-6■■□□□ 13.1
AARSP49588 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.524e-6■■□□□ 13.1
AARSP49588 MYO18A-209ENST00000531253 7504 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.544e-6■■□□□ 13.1
AARSP49588 MYO18A-223ENST00000628822 7501 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.544e-6■■□□□ 13.1
AARSP49588 NUP98-205ENST00000397007 3698 ntTSL 1 (best) BASIC11.62□□□□□ -0.554e-6■■□□□ 13.1
AARSP49588 LIG1-213ENST00000596672 792 ntTSL 311.43□□□□□ -0.584e-6■■□□□ 13.1
AARSP49588 DDX41-211ENST00000510171 569 ntTSL 311.32□□□□□ -0.64e-6■■□□□ 13.1
AARSP49588 MYO18A-214ENST00000533112 7522 ntTSL 1 (best) BASIC11.31□□□□□ -0.64e-6■■□□□ 13.1
AARSP49588 ARFGAP2-213ENST00000527776 709 ntTSL 211.05□□□□□ -0.644e-6■■□□□ 13.1
AARSP49588 THAP9-AS1-207ENST00000507660 550 ntTSL 311.04□□□□□ -0.644e-6■■□□□ 13.1
AARSP49588 AP000561.1-201ENST00000444130 435 ntTSL 5 BASIC10.75□□□□□ -0.694e-6■■□□□ 13.1
AARSP49588 THAP9-AS1-201ENST00000503704 637 ntTSL 210.67□□□□□ -0.74e-6■■□□□ 13.1
AARSP49588 SEC31A-218ENST00000506495 541 ntTSL 410.67□□□□□ -0.74e-6■■□□□ 13.1
AARSP49588 THAP9-AS1-208ENST00000508772 566 ntTSL 410.67□□□□□ -0.74e-6■■□□□ 13.1
AARSP49588 THAP9-AS1-209ENST00000509007 566 ntTSL 410.67□□□□□ -0.74e-6■■□□□ 13.1
AARSP49588 THAP9-AS1-212ENST00000513581 683 ntTSL 210.67□□□□□ -0.74e-6■■□□□ 13.1
AARSP49588 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.734e-11■■□□□ 13.1
AARSP49588 DDX42-215ENST00000582985 543 ntTSL 410.39□□□□□ -0.754e-6■■□□□ 13.1
AARSP49588 MED24-231ENST00000584782 542 ntTSL 310.24□□□□□ -0.774e-6■■□□□ 13.1
AARSP49588 SEC31A-220ENST00000507051 458 ntTSL 410.16□□□□□ -0.784e-6■■□□□ 13.1
AARSP49588 MPHOSPH9-218ENST00000545974 1739 ntTSL 410.13□□□□□ -0.794e-6■■□□□ 13.1
AARSP49588 SMC1A-203ENST00000428014 868 ntTSL 39.96□□□□□ -0.824e-11■■□□□ 13.1
AARSP49588 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.874e-6■■□□□ 13.1
AARSP49588 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC9.5□□□□□ -0.894e-6■■□□□ 13.1
AARSP49588 THAP9-AS1-205ENST00000504869 535 ntTSL 49.32□□□□□ -0.924e-6■■□□□ 13.1
AARSP49588 THAP9-AS1-210ENST00000511271 516 ntTSL 29.32□□□□□ -0.924e-6■■□□□ 13.1
AARSP49588 DDX42-214ENST00000581767 2244 nt9.28□□□□□ -0.924e-6■■□□□ 13.1
AARSP49588 MED24-228ENST00000581058 524 ntTSL 49.21□□□□□ -0.944e-6■■□□□ 13.1
AARSP49588 NUP98-219ENST00000532475 553 ntTSL 48.91□□□□□ -0.984e-6■■□□□ 13.1
AARSP49588 MPHOSPH9-208ENST00000539024 3414 ntTSL 1 (best)8.89□□□□□ -0.994e-6■■□□□ 13.1
AARSP49588 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.73□□□□□ -1.014e-6■■□□□ 13.1
AARSP49588 THAP9-AS1-211ENST00000512932 971 ntTSL 28.65□□□□□ -1.024e-6■■□□□ 13.1
AARSP49588 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC8.58□□□□□ -1.048e-8■■□□□ 13.1
AARSP49588 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.044e-6■■□□□ 13.1
AARSP49588 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.57□□□□□ -1.044e-6■■□□□ 13.1
AARSP49588 DDX42-207ENST00000578593 2919 ntTSL 28.25□□□□□ -1.094e-6■■□□□ 13.1
AARSP49588 SEC31A-222ENST00000507676 551 ntTSL 48.08□□□□□ -1.124e-6■■□□□ 13.1
AARSP49588 ANP32E-206ENST00000534220 512 ntTSL 57.91□□□□□ -1.144e-6■■□□□ 13.1
AARSP49588 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.8□□□□□ -1.164e-6■■□□□ 13.1
AARSP49588 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.184e-11■■□□□ 13.1
AARSP49588 SEC31A-211ENST00000503210 553 ntTSL 47.65□□□□□ -1.184e-6■■□□□ 13.1
AARSP49588 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.197e-8■■□□□ 13.1
AARSP49588 TAF1D-204ENST00000525928 1710 ntTSL 27.61□□□□□ -1.194e-6■■□□□ 13.1
AARSP49588 THAP9-AS1-206ENST00000505028 552 ntTSL 47.5□□□□□ -1.214e-6■■□□□ 13.1
AARSP49588 DDX42-217ENST00000584010 3929 ntTSL 27.46□□□□□ -1.214e-6■■□□□ 13.1
AARSP49588 THAP9-AS1-203ENST00000504718 573 ntTSL 47.23□□□□□ -1.254e-6■■□□□ 13.1
AARSP49588 SRSF11-214ENST00000484162 4008 ntTSL 1 (best)7.16□□□□□ -1.267e-8■■□□□ 13.1
AARSP49588 TAF1D-222ENST00000546088 1728 ntTSL 36.89□□□□□ -1.314e-6■■□□□ 13.1
AARSP49588 CHD2-221ENST00000635856 4236 ntTSL 56.81□□□□□ -1.328e-8■■□□□ 13.1
AARSP49588 CNOT1-204ENST00000563130 2280 ntTSL 26.7□□□□□ -1.344e-11■■□□□ 13.1
AARSP49588 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.364e-6■■□□□ 13.1
AARSP49588 MPHOSPH9-223ENST00000606704 553 ntTSL 56.44□□□□□ -1.384e-6■■□□□ 13.1
AARSP49588 CNOT1-211ENST00000567188 7830 ntTSL 1 (best)6.3□□□□□ -1.44e-11■■□□□ 13.1
AARSP49588 CACYBP-206ENST00000469173 904 ntTSL 36.21□□□□□ -1.428e-8■■□□□ 13.1
AARSP49588 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.464e-6■■□□□ 13.1
AARSP49588 TAF1D-210ENST00000529435 1011 ntTSL 55.82□□□□□ -1.484e-6■■□□□ 13.1
AARSP49588 MPHOSPH9-204ENST00000536198 607 ntTSL 25.79□□□□□ -1.484e-6■■□□□ 13.1
AARSP49588 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.79□□□□□ -1.487e-8■■□□□ 13.1
AARSP49588 TAF1D-215ENST00000530769 4358 ntTSL 25.74□□□□□ -1.494e-6■■□□□ 13.1
AARSP49588 CHD2-227ENST00000637572 4452 ntTSL 55.61□□□□□ -1.518e-8■■□□□ 13.1
AARSP49588 TAF1D-214ENST00000530089 1429 ntTSL 35.38□□□□□ -1.554e-6■■□□□ 13.1
AARSP49588 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.64e-6■■□□□ 13.1
AARSP49588 MPHOSPH9-213ENST00000541603 856 ntAPPRIS ALT2 TSL 1 (best)4.96□□□□□ -1.624e-6■■□□□ 13.1
AARSP49588 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.624e-11■■□□□ 13.1
AARSP49588 TAF1D-212ENST00000529794 1123 ntTSL 24.9□□□□□ -1.634e-6■■□□□ 13.1
AARSP49588 TAF1D-202ENST00000393259 547 ntTSL 34.69□□□□□ -1.664e-6■■□□□ 13.1
AARSP49588 SRSF11-206ENST00000461935 3501 ntTSL 1 (best)4.5□□□□□ -1.697e-8■■□□□ 13.1
AARSP49588 TAF1D-218ENST00000533794 505 ntTSL 24.46□□□□□ -1.74e-6■■□□□ 13.1
AARSP49588 SRSF11-208ENST00000463859 1035 ntTSL 54.11□□□□□ -1.757e-8■■□□□ 13.1
AARSP49588 SRSF11-205ENST00000460795 528 ntTSL 23.91□□□□□ -1.787e-8■■□□□ 13.1
AARSP49588 SRSF11-216ENST00000489188 784 ntTSL 23.86□□□□□ -1.797e-8■■□□□ 13.1
AARSP49588 MPHOSPH9-201ENST00000302373 3097 ntTSL 1 (best)3.86□□□□□ -1.794e-6■■□□□ 13.1
AARSP49588 TAF1D-221ENST00000540232 483 ntTSL 33.84□□□□□ -1.794e-6■■□□□ 13.1
AARSP49588 CNOT1-221ENST00000569924 493 ntTSL 23.55□□□□□ -1.844e-11■■□□□ 13.1
AARSP49588 MPHOSPH9-217ENST00000545556 3634 ntTSL 53.08□□□□□ -1.924e-6■■□□□ 13.1
AARSP49588 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.054e-6■■□□□ 13.1
AARSP49588 KTN1-224ENST00000556631 5299 ntTSL 1 (best)2.02□□□□□ -2.094e-6■■□□□ 13.1
Retrieved 100 of 8,200 protein–RNA pairs in 132.7 ms