RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 NISCHQ9Y2I1 1504 aa7.7□□□□□ -1.18
CNOT1-201ENST00000317147 MYT1Q01538 1121 aa7.7□□□□□ -1.18
CNOT1-201ENST00000317147 PELP1Q8IZL8 1130 aaKnown RBP7.64□□□□□ -1.19
CNOT1-201ENST00000317147 TTBK1Q5TCY1 1321 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-201ENST00000317147 ZEB1P37275 1124 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-201ENST00000317147 SUPT5HO00267 1087 aaKnown RBP7.06□□□□□ -1.28
CNOT1-201ENST00000317147 CENPBP07199 599 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-201ENST00000317147 SHROOM4Q9ULL8 1493 aa7□□□□□ -1.29
CNOT1-201ENST00000317147 PCGF6Q9BYE7 350 aa6.99□□□□□ -1.29
CNOT1-201ENST00000317147 CCER1Q8TC90 406 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-201ENST00000317147 DCAF8L2P0C7V8 631 aa6.94□□□□□ -1.3
CNOT1-201ENST00000317147 CLSPNQ9HAW4 1339 aa6.87□□□□□ -1.31
CNOT1-201ENST00000317147 HRCP23327 699 aa6.86□□□□□ -1.31
CNOT1-201ENST00000317147 YTHDC1Q96MU7 727 aaKnown RBP6.83□□□□□ -1.32
CNOT1-201ENST00000317147 PPARGC1BQ86YN6 1023 aaKnown RBP6.78□□□□□ -1.32
CNOT1-201ENST00000317147 EHMT2Q96KQ7 1210 aa6.76□□□□□ -1.33
CNOT1-201ENST00000317147 MYT1LQ9UL68 1186 aa6.74□□□□□ -1.33
CNOT1-201ENST00000317147 TRIM26Q12899 539 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-201ENST00000317147 ERICH6Q7L0X2 663 aa6.72□□□□□ -1.33
CNOT1-201ENST00000317147 DCAF1Q9Y4B6 1507 aa6.69□□□□□ -1.34
CNOT1-201ENST00000317147 CCDC180Q9P1Z9 1646 aa6.68□□□□□ -1.34
CNOT1-201ENST00000317147 NEFLP07196 543 aa6.67□□□□□ -1.34
CNOT1-201ENST00000317147 APLP2Q06481 763 aa6.65□□□□□ -1.34
CNOT1-201ENST00000317147 LOC105371045A0A1W2PR82 267 aa6.62□□□□□ -1.35
CNOT1-201ENST00000317147 FAM9AQ8IZU1 332 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-201ENST00000317147 CHIC1Q5VXU3 224 aa6.55□□□□□ -1.36
CNOT1-201ENST00000317147 ZCCHC6Q5VYS8 1495 aaKnown RBP6.48□□□□□ -1.37
CNOT1-201ENST00000317147 MYO15BQ96JP2 1530 aa6.48□□□□□ -1.37
CNOT1-201ENST00000317147 TRIM41Q8WV44 630 aa6.47□□□□□ -1.37
CNOT1-201ENST00000317147 SCAF1Q9H7N4 1312 aaKnown RBP6.46□□□□□ -1.38
CNOT1-201ENST00000317147 RTL5Q5HYW3 569 aaPredicted RBP6.46□□□□□ -1.38
CNOT1-201ENST00000317147 ACIN1Q9UKV3 1341 aaKnown RBP6.46□□□□□ -1.38
CNOT1-201ENST00000317147 GTF3C3Q9Y5Q9 886 aa6.46□□□□□ -1.38
CNOT1-201ENST00000317147 DIEXFQ68CQ4 756 aaKnown RBP6.44□□□□□ -1.38
CNOT1-201ENST00000317147 GLIPR1L2Q4G1C9 344 aa6.44□□□□□ -1.38
CNOT1-201ENST00000317147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.43□□□□□ -1.38
CNOT1-201ENST00000317147 DAXXQ9UER7 740 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-201ENST00000317147 KAT6BQ8WYB5 2073 aa6.38□□□□□ -1.39
CNOT1-201ENST00000317147 NEUROD1Q13562 356 aa6.34□□□□□ -1.39
CNOT1-201ENST00000317147 ZNF316A6NFI3 1004 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-201ENST00000317147 EEA1Q15075 1411 aa6.31□□□□□ -1.4
CNOT1-201ENST00000317147 CDK11AQ9UQ88 783 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-201ENST00000317147 RANGAP1P46060 587 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-201ENST00000317147 UBTFP17480 764 aaKnown RBP6.29□□□□□ -1.4
CNOT1-201ENST00000317147 ANP32AP39687 249 aaKnown RBP6.26□□□□□ -1.41
CNOT1-201ENST00000317147 ERICH6BQ5W0A0 696 aa6.25□□□□□ -1.41
CNOT1-201ENST00000317147 ANP32EQ9BTT0 268 aa6.24□□□□□ -1.41
CNOT1-201ENST00000317147 HNRNPUL2Q1KMD3 747 aaKnown RBP6.24□□□□□ -1.41
CNOT1-201ENST00000317147 ARID4BQ4LE39 1312 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-201ENST00000317147 ANP32CO43423 234 aa6.19□□□□□ -1.42
CNOT1-201ENST00000317147 NACADO15069 1562 aa6.19□□□□□ -1.42
CNOT1-201ENST00000317147 BCANQ96GW7 911 aa6.18□□□□□ -1.42
CNOT1-201ENST00000317147 RB1CC1Q8TDY2 1594 aa6.17□□□□□ -1.42
CNOT1-201ENST00000317147 ABCC9O60706 1549 aa6.16□□□□□ -1.42
CNOT1-201ENST00000317147 EIF5BO60841 1220 aaKnown RBP6.16□□□□□ -1.42
CNOT1-201ENST00000317147 NCLP19338 710 aaKnown RBP6.15□□□□□ -1.42
CNOT1-201ENST00000317147 GON4LQ3T8J9 2241 aa6.15□□□□□ -1.43
CNOT1-201ENST00000317147 ANP32BQ92688 251 aaKnown RBP6.14□□□□□ -1.43
CNOT1-201ENST00000317147 MIER1Q8N108 512 aa6.14□□□□□ -1.43
CNOT1-201ENST00000317147 ITGAEP38570 1179 aa6.14□□□□□ -1.43
CNOT1-201ENST00000317147 TIMELESSQ9UNS1 1208 aa6.12□□□□□ -1.43
CNOT1-201ENST00000317147 DDRGK1Q96HY6 314 aa6.12□□□□□ -1.43
CNOT1-201ENST00000317147 SCRIBQ14160 1630 aa6.11□□□□□ -1.43
CNOT1-201ENST00000317147 PPM1GO15355 546 aaPredicted RBP6.09□□□□□ -1.43
CNOT1-201ENST00000317147 AK9Q5TCS8 1911 aa6.09□□□□□ -1.43
CNOT1-201ENST00000317147 GOLGA3Q08378 1498 aa6.09□□□□□ -1.43
CNOT1-201ENST00000317147 BCL11AQ9H165 835 aa6.09□□□□□ -1.43
CNOT1-201ENST00000317147 ATP1B4Q9UN42 357 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-201ENST00000317147 USP35Q9P2H5 1018 aa6.08□□□□□ -1.44
CNOT1-201ENST00000317147 WRNQ14191 1432 aaPredicted RBP eCLIP6.07□□□□□ -1.44
CNOT1-201ENST00000317147 TNNT2P45379 298 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-201ENST00000317147 TRIM44Q96DX7 344 aaPredicted RBP6.06□□□□□ -1.44
CNOT1-201ENST00000317147 UPF2Q9HAU5 1272 aaKnown RBP6.06□□□□□ -1.44
CNOT1-201ENST00000317147 ZBTB47Q9UFB7 747 aaPredicted RBP6.06□□□□□ -1.44
CNOT1-201ENST00000317147 CEP164Q9UPV0 1460 aa6.05□□□□□ -1.44
CNOT1-201ENST00000317147 FKBP8Q14318 412 aa6.05□□□□□ -1.44
CNOT1-201ENST00000317147 TNIKQ9UKE5 1360 aa6.04□□□□□ -1.44
CNOT1-201ENST00000317147 BAZ1AQ9NRL2 1556 aaPredicted RBP6.04□□□□□ -1.44
CNOT1-201ENST00000317147 CCER2I3L3R5 266 aa6.03□□□□□ -1.44
CNOT1-201ENST00000317147 CNGB1Q14028 1251 aaPredicted RBP6.03□□□□□ -1.44
CNOT1-201ENST00000317147 TCHHQ07283 1943 aa6.03□□□□□ -1.44
CNOT1-201ENST00000317147 PTMSP20962 102 aa6.02□□□□□ -1.45
CNOT1-201ENST00000317147 BECN1Q14457 450 aa6.02□□□□□ -1.45
CNOT1-201ENST00000317147 TONSLQ96HA7 1378 aa6.01□□□□□ -1.45
CNOT1-201ENST00000317147 TRIM52Q96A61 297 aa6.01□□□□□ -1.45
CNOT1-201ENST00000317147 BAZ1BQ9UIG0 1483 aaKnown RBP6.01□□□□□ -1.45
CNOT1-201ENST00000317147 CEP162Q5TB80 1403 aa6.01□□□□□ -1.45
CNOT1-201ENST00000317147 RSPH6AQ9H0K4 717 aa6□□□□□ -1.45
CNOT1-201ENST00000317147 POLR3GLQ9BT43 218 aa6□□□□□ -1.45
CNOT1-201ENST00000317147 UNC13AQ9UPW8 1703 aa6□□□□□ -1.45
CNOT1-201ENST00000317147 GOLGA4Q13439 2230 aaKnown RBP6□□□□□ -1.45
CNOT1-201ENST00000317147 GOLGA6L2Q8N9W4 650 aaPredicted RBP6□□□□□ -1.45
CNOT1-201ENST00000317147 CFAP65Q6ZU64 1925 aaKnown RBP6□□□□□ -1.45
CNOT1-201ENST00000317147 CLIP1P30622 1438 aa6□□□□□ -1.45
CNOT1-201ENST00000317147 RSF1Q96T23 1441 aaPredicted RBP6□□□□□ -1.45
CNOT1-201ENST00000317147 SUPT16HQ9Y5B9 1047 aaKnown RBP5.99□□□□□ -1.45
CNOT1-201ENST00000317147 FANCIQ9NVI1 1328 aa5.99□□□□□ -1.45
CNOT1-201ENST00000317147 L1TD1Q5T7N2 865 aaKnown RBP5.99□□□□□ -1.45
CNOT1-201ENST00000317147 CSRNP3Q8WYN3 585 aa5.99□□□□□ -1.45
CNOT1-201ENST00000317147 NBR1Q14596 966 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms