RNA–Protein interactions for RNA: ENST00000584010.5

DDX42-217, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 3,929 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-217ENST00000584010 NISCHQ9Y2I1 1504 aa14.43□□□□□ -0.1
DDX42-217ENST00000584010 ABCC9O60706 1549 aa13.39□□□□□ -0.27
DDX42-217ENST00000584010 DCAF8L2P0C7V8 631 aa12.87□□□□□ -0.35
DDX42-217ENST00000584010 CCDC180Q9P1Z9 1646 aa12.82□□□□□ -0.36
DDX42-217ENST00000584010 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
DDX42-217ENST00000584010 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.391e-6■■□□□ 14.2
DDX42-217ENST00000584010 RB1CC1Q8TDY2 1594 aa12.48□□□□□ -0.41
DDX42-217ENST00000584010 NACADO15069 1562 aa12.31□□□□□ -0.44
DDX42-217ENST00000584010 PELP1Q8IZL8 1130 aaKnown RBP12.1□□□□□ -0.47
DDX42-217ENST00000584010 CECR2Q9BXF3 1484 aa12.03□□□□□ -0.48
DDX42-217ENST00000584010 BICRAQ9NZM4 1560 aa12□□□□□ -0.49
DDX42-217ENST00000584010 MYT1Q01538 1121 aa12□□□□□ -0.49
DDX42-217ENST00000584010 UNC13AQ9UPW8 1703 aa11.98□□□□□ -0.49
DDX42-217ENST00000584010 MYO15BQ96JP2 1530 aa11.95□□□□□ -0.5
DDX42-217ENST00000584010 SCRIBQ14160 1630 aa11.93□□□□□ -0.5
DDX42-217ENST00000584010 CC2D2AQ9P2K1 1620 aa11.9□□□□□ -0.5
DDX42-217ENST00000584010 ZCCHC6Q5VYS8 1495 aaKnown RBP11.86□□□□□ -0.51
DDX42-217ENST00000584010 EIF4G1Q04637 1599 aaKnown RBP11.82□□□□□ -0.52
DDX42-217ENST00000584010 DNAJC5Q9H3Z4 198 aa11.81□□□□□ -0.52
DDX42-217ENST00000584010 SHROOM4Q9ULL8 1493 aa11.78□□□□□ -0.52
DDX42-217ENST00000584010 DCAF1Q9Y4B6 1507 aa11.76□□□□□ -0.53
DDX42-217ENST00000584010 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
DDX42-217ENST00000584010 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
DDX42-217ENST00000584010 TTBK1Q5TCY1 1321 aaPredicted RBP11.5□□□□□ -0.57
DDX42-217ENST00000584010 TRIM41Q8WV44 630 aa11.48□□□□□ -0.57
DDX42-217ENST00000584010 CUX2O14529 1486 aa11.43□□□□□ -0.58
DDX42-217ENST00000584010 NCAPD3P42695 1498 aa11.41□□□□□ -0.58
DDX42-217ENST00000584010 ATAD2BQ9ULI0 1458 aa11.39□□□□□ -0.59
DDX42-217ENST00000584010 NESP48681 1621 aa11.39□□□□□ -0.59
DDX42-217ENST00000584010 BAZ1BQ9UIG0 1483 aaKnown RBP11.34□□□□□ -0.59
DDX42-217ENST00000584010 SMARCA2P51531 1590 aa11.32□□□□□ -0.6
DDX42-217ENST00000584010 PDS5BQ9NTI5 1447 aa11.26□□□□□ -0.61
DDX42-217ENST00000584010 SMARCA4P51532 1647 aa11.25□□□□□ -0.61
DDX42-217ENST00000584010 BAZ1AQ9NRL2 1556 aaPredicted RBP11.22□□□□□ -0.61
DDX42-217ENST00000584010 HMGXB3Q12766 1538 aa11.22□□□□□ -0.61
DDX42-217ENST00000584010 CADPSQ9ULU8 1353 aa11.17□□□□□ -0.62
DDX42-217ENST00000584010 OSCARQ8IYS5 282 aa11.17□□□□□ -0.62
DDX42-217ENST00000584010 MROH2BQ7Z745 1585 aa11.16□□□□□ -0.62
DDX42-217ENST00000584010 LAMC3Q9Y6N6 1575 aa11.13□□□□□ -0.63
DDX42-217ENST00000584010 MRC2Q9UBG0 1479 aa11.08□□□□□ -0.64
DDX42-217ENST00000584010 CHIC1Q5VXU3 224 aa11.08□□□□□ -0.64
DDX42-217ENST00000584010 THOC2Q8NI27 1593 aaKnown RBP11.07□□□□□ -0.64
DDX42-217ENST00000584010 KIF21AQ7Z4S6 1674 aa11.06□□□□□ -0.64
DDX42-217ENST00000584010 FBLN2P98095 1184 aa11.05□□□□□ -0.64
DDX42-217ENST00000584010 CEP164Q9UPV0 1460 aa11.05□□□□□ -0.64
DDX42-217ENST00000584010 TRHP20396 242 aaPredicted RBP11.04□□□□□ -0.64
DDX42-217ENST00000584010 FANCD2Q9BXW9 1451 aa11.03□□□□□ -0.64
DDX42-217ENST00000584010 PEG3Q9GZU2 1588 aa11.02□□□□□ -0.65
DDX42-217ENST00000584010 HRCP23327 699 aa11.01□□□□□ -0.65
DDX42-217ENST00000584010 CYB5RLQ6IPT4 315 aa11.01□□□□□ -0.65
DDX42-217ENST00000584010 WIZO95785 1651 aa10.98□□□□□ -0.65
DDX42-217ENST00000584010 ERICH6Q7L0X2 663 aa10.96□□□□□ -0.66
DDX42-217ENST00000584010 PCGF6Q9BYE7 350 aa10.94□□□□□ -0.66
DDX42-217ENST00000584010 WDR62O43379 1518 aa10.94□□□□□ -0.66
DDX42-217ENST00000584010 RSF1Q96T23 1441 aaPredicted RBP10.91□□□□□ -0.66
DDX42-217ENST00000584010 CFTRP13569 1480 aa10.9□□□□□ -0.66
DDX42-217ENST00000584010 AEBP2Q6ZN18 517 aaPredicted RBP10.87□□□□□ -0.67
DDX42-217ENST00000584010 URB2Q14146 1524 aaKnown RBP10.87□□□□□ -0.67
DDX42-217ENST00000584010 LOC105371045A0A1W2PR82 267 aa10.84□□□□□ -0.67
DDX42-217ENST00000584010 ZNF608Q9ULD9 1512 aaPredicted RBP10.84□□□□□ -0.67
DDX42-217ENST00000584010 CHMP7Q8WUX9 453 aaPredicted RBP10.82□□□□□ -0.68
DDX42-217ENST00000584010 PRKCSHP14314 528 aaPredicted RBP10.82□□□□□ -0.68
DDX42-217ENST00000584010 IFT140Q96RY7 1462 aa10.8□□□□□ -0.68
DDX42-217ENST00000584010 TOP2AP11388 1531 aaKnown RBP10.8□□□□□ -0.68
DDX42-217ENST00000584010 AQRO60306 1485 aaKnown RBP eCLIP10.8□□□□□ -0.689e-7■■■■□ 20
DDX42-217ENST00000584010 CCDC88BA6NC98 1476 aa10.79□□□□□ -0.68
DDX42-217ENST00000584010 TDRD9Q8NDG6 1382 aaKnown RBP10.77□□□□□ -0.68
DDX42-217ENST00000584010 ARHGEF11O15085 1522 aa10.77□□□□□ -0.69
DDX42-217ENST00000584010 RIMBP3CA6NJZ7 1639 aa10.75□□□□□ -0.69
DDX42-217ENST00000584010 RIMBP3BA6NNM3 1639 aa10.75□□□□□ -0.69
DDX42-217ENST00000584010 RIMBP3Q9UFD9 1639 aa10.75□□□□□ -0.69
DDX42-217ENST00000584010 TOPBP1Q92547 1522 aa10.75□□□□□ -0.69
DDX42-217ENST00000584010 EHMT2Q96KQ7 1210 aa10.74□□□□□ -0.69
DDX42-217ENST00000584010 FAM9AQ8IZU1 332 aaPredicted RBP10.73□□□□□ -0.69
DDX42-217ENST00000584010 ABCC8Q09428 1581 aa10.71□□□□□ -0.69
DDX42-217ENST00000584010 SOGA1O94964 1423 aa10.71□□□□□ -0.69
DDX42-217ENST00000584010 SCAF1Q9H7N4 1312 aaKnown RBP10.7□□□□□ -0.7
DDX42-217ENST00000584010 RAD54L2Q9Y4B4 1467 aa10.69□□□□□ -0.7
DDX42-217ENST00000584010 PPARGC1BQ86YN6 1023 aaKnown RBP10.68□□□□□ -0.7
DDX42-217ENST00000584010 BCL11AQ9H165 835 aa10.67□□□□□ -0.7
DDX42-217ENST00000584010 SLC24A1O60721 1099 aa10.66□□□□□ -0.7
DDX42-217ENST00000584010 APLP2Q06481 763 aa10.65□□□□□ -0.7
DDX42-217ENST00000584010 EIF4G3O43432 1585 aaKnown RBP10.64□□□□□ -0.71
DDX42-217ENST00000584010 POLA1P09884 1462 aaPredicted RBP10.64□□□□□ -0.71
DDX42-217ENST00000584010 ARAP1Q96P48 1450 aa10.63□□□□□ -0.71
DDX42-217ENST00000584010 TRIM26Q12899 539 aaPredicted RBP10.63□□□□□ -0.71
DDX42-217ENST00000584010 DNMBPQ6XZF7 1577 aa10.63□□□□□ -0.71
DDX42-217ENST00000584010 SNAPC4Q5SXM2 1469 aa10.61□□□□□ -0.71
DDX42-217ENST00000584010 CENPBP07199 599 aaPredicted RBP10.6□□□□□ -0.71
DDX42-217ENST00000584010 FGD5Q6ZNL6 1462 aa10.57□□□□□ -0.72
DDX42-217ENST00000584010 CHD1O14646 1710 aa10.57□□□□□ -0.72
DDX42-217ENST00000584010 NPM1P06748 294 aaKnown RBP eCLIP10.56□□□□□ -0.72
DDX42-217ENST00000584010 GRIN2BQ13224 1484 aa10.55□□□□□ -0.72
DDX42-217ENST00000584010 TARBP1Q13395 1621 aaKnown RBP10.53□□□□□ -0.72
DDX42-217ENST00000584010 PRDM2Q13029 1718 aa10.53□□□□□ -0.72
DDX42-217ENST00000584010 GAPVD1Q14C86 1478 aa10.52□□□□□ -0.72
DDX42-217ENST00000584010 SYNJ1O43426 1573 aa10.52□□□□□ -0.73
DDX42-217ENST00000584010 SYNJ2O15056 1496 aa10.51□□□□□ -0.73
DDX42-217ENST00000584010 MAGI1Q96QZ7 1491 aaPredicted RBP10.51□□□□□ -0.73
DDX42-217ENST00000584010 FAM69CQ0P6D2 419 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms