Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 GEP7YGL057C 864 nt-0.27□□□□□ -2.45
TY1B-JR1P47098 MUM2YBR057C 1101 nt-0.27□□□□□ -2.45
TY1B-JR1P47098 YDR199WYDR199W 366 nt-0.27□□□□□ -2.45
TY1B-JR1P47098 RAD6YGL058W 519 nt-0.27□□□□□ -2.45
TY1B-JR1P47098 YOR186C-AYOR186C-A 210 nt-0.27□□□□□ -2.45
TY1B-JR1P47098 YPL225WYPL225W 441 nt-0.27□□□□□ -2.45
TY1B-JR1P47098 RAD34YDR314C 2079 nt-0.27□□□□□ -2.45
TY1B-JR1P47098 TIM10YHR005C-A 282 nt-0.28□□□□□ -2.45
TY1B-JR1P47098 YBL068W-AYBL068W-A 237 nt-0.28□□□□□ -2.45
TY1B-JR1P47098 LEE1YPL054W 906 nt-0.28□□□□□ -2.45
TY1B-JR1P47098 YDR114CYDR114C 303 nt-0.29□□□□□ -2.46
TY1B-JR1P47098 SWM2YNR004W 441 nt-0.29□□□□□ -2.46
TY1B-JR1P47098 CRG1YHR209W 876 nt-0.3□□□□□ -2.46
TY1B-JR1P47098 BET4YJL031C 984 nt-0.3□□□□□ -2.46
TY1B-JR1P47098 GPI2YPL076W 843 nt-0.3□□□□□ -2.46
TY1B-JR1P47098 RCO1YMR075W 2055 nt-0.3□□□□□ -2.46
TY1B-JR1P47098 YDL187CYDL187C 330 nt-0.31□□□□□ -2.46
TY1B-JR1P47098 YBR062CYBR062C 543 nt-0.31□□□□□ -2.46
TY1B-JR1P47098 PMP1YCR024C-A 123 nt-0.32□□□□□ -2.46
TY1B-JR1P47098 YGR042WYGR042W 816 nt-0.32□□□□□ -2.46
TY1B-JR1P47098 YLR101CYLR101C 396 nt-0.32□□□□□ -2.46
TY1B-JR1P47098 FAR3YMR052W 615 nt-0.32□□□□□ -2.46
TY1B-JR1P47098 MFA2YNL145W 117 nt-0.32□□□□□ -2.46
TY1B-JR1P47098 YPR172WYPR172W 603 nt-0.32□□□□□ -2.46
TY1B-JR1P47098 RTC6YPL183W-A 282 nt-0.32□□□□□ -2.46
TY1B-JR1P47098 YPL080CYPL080C 327 nt-0.33□□□□□ -2.46
TY1B-JR1P47098 INP2YMR163C 2118 nt-0.33□□□□□ -2.46
TY1B-JR1P47098 YJL032WYJL032W 315 nt-0.34□□□□□ -2.46
TY1B-JR1P47098 RPL42BYHR141C 321 nt-0.34□□□□□ -2.46
TY1B-JR1P47098 CCE1YKL011C 1062 nt-0.34□□□□□ -2.46
TY1B-JR1P47098 YLR252WYLR252W 306 nt-0.34□□□□□ -2.46
TY1B-JR1P47098 YNL050CYNL050C 813 nt-0.34□□□□□ -2.46
TY1B-JR1P47098 RPL42AYNL162W 321 nt-0.34□□□□□ -2.46
TY1B-JR1P47098 PHO80YOL001W 882 nt-0.34□□□□□ -2.46
TY1B-JR1P47098 LCD1YDR499W 2244 nt-0.35□□□□□ -2.47
TY1B-JR1P47098 HOT13YKL084W 351 nt-0.35□□□□□ -2.47
TY1B-JR1P47098 YKL115CYKL115C 393 nt-0.35□□□□□ -2.47
TY1B-JR1P47098 UPS1YLR193C 528 nt-0.35□□□□□ -2.47
TY1B-JR1P47098 RRT1YBL048W 312 nt-0.35□□□□□ -2.47
TY1B-JR1P47098 YBR071WYBR071W 636 nt-0.35□□□□□ -2.47
TY1B-JR1P47098 RPS27AYKL156W 249 nt-0.36□□□□□ -2.47
TY1B-JR1P47098 YOR169CYOR169C 465 nt-0.36□□□□□ -2.47
TY1B-JR1P47098 EFR3YMR212C 2349 nt-0.37□□□□□ -2.47
TY1B-JR1P47098 YNL150WYNL150W 408 nt-0.37□□□□□ -2.47
TY1B-JR1P47098 YNL211CYNL211C 261 nt-0.37□□□□□ -2.47
TY1B-JR1P47098 RAD61YDR014W 1944 nt-0.38□□□□□ -2.47
TY1B-JR1P47098 SPO23YBR250W 1572 nt-0.38□□□□□ -2.47
TY1B-JR1P47098 YJL156W-AYJL156W-A 222 nt-0.38□□□□□ -2.47
TY1B-JR1P47098 YPR142CYPR142C 564 nt-0.38□□□□□ -2.47
TY1B-JR1P47098 HNT1YDL125C 477 nt-0.39□□□□□ -2.47
TY1B-JR1P47098 snR8snR8 190 nt-0.39□□□□□ -2.47
TY1B-JR1P47098 RTR2YDR066C 591 nt-0.39□□□□□ -2.47
TY1B-JR1P47098 YDR194W-AYDR194W-A 153 nt-0.39□□□□□ -2.47
TY1B-JR1P47098 GPG1YGL121C 381 nt-0.39□□□□□ -2.47
TY1B-JR1P47098 YPR170W-AYPR170W-A 186 nt-0.39□□□□□ -2.47
TY1B-JR1P47098 REF2YDR195W 1602 nt-0.39□□□□□ -2.47
TY1B-JR1P47098 RFA3YJL173C 369 nt-0.4□□□□□ -2.47
TY1B-JR1P47098 YCL002CYCL002C 792 nt-0.4□□□□□ -2.47
TY1B-JR1P47098 FYV10YIL097W 1551 nt-0.4□□□□□ -2.47
TY1B-JR1P47098 VPS28YPL065W 729 nt-0.4□□□□□ -2.47
TY1B-JR1P47098 YHR139C-AYHR139C-A 312 nt-0.41□□□□□ -2.47
TY1B-JR1P47098 YDL068WYDL068W 330 nt-0.42□□□□□ -2.48
TY1B-JR1P47098 YDR210WYDR210W 228 nt-0.42□□□□□ -2.48
TY1B-JR1P47098 GOS1YHL031C 672 nt-0.42□□□□□ -2.48
TY1B-JR1P47098 YJL127W-AYJL127W-A 117 nt-0.42□□□□□ -2.48
TY1B-JR1P47098 PRP21YJL203W 843 nt-0.42□□□□□ -2.48
TY1B-JR1P47098 RPM2YML091C 3609 nt-0.42□□□□□ -2.48
TY1B-JR1P47098 SEC10YLR166C 2616 nt-0.42□□□□□ -2.48
TY1B-JR1P47098 SRP14YDL092W 441 nt-0.42□□□□□ -2.48
TY1B-JR1P47098 YDR029WYDR029W 315 nt-0.42□□□□□ -2.48
TY1B-JR1P47098 ATP15YPL271W 189 nt-0.42□□□□□ -2.48
TY1B-JR1P47098 HTB2YBL002W 396 nt-0.43□□□□□ -2.48
TY1B-JR1P47098 KAR1YNL188W 1302 nt-0.44□□□□□ -2.48
TY1B-JR1P47098 YER158W-AYER158W-A 216 nt-0.44□□□□□ -2.48
TY1B-JR1P47098 YHL042WYHL042W 453 nt-0.44□□□□□ -2.48
TY1B-JR1P47098 YIR030W-AYIR030W-A 384 nt-0.44□□□□□ -2.48
TY1B-JR1P47098 AFB1YLR040C 675 nt-0.44□□□□□ -2.48
TY1B-JR1P47098 SMD2YLR275W 333 nt-0.44□□□□□ -2.48
TY1B-JR1P47098 RPS16AYMR143W 432 nt-0.44□□□□□ -2.48
TY1B-JR1P47098 YIR018C-AYIR018C-A 138 nt-0.45□□□□□ -2.48
TY1B-JR1P47098 YJR011CYJR011C 786 nt-0.45□□□□□ -2.48
TY1B-JR1P47098 SOV1YMR066W 2697 nt-0.45□□□□□ -2.48
TY1B-JR1P47098 YPL197CYPL197C 414 nt-0.45□□□□□ -2.48
TY1B-JR1P47098 ZIP1YDR285W 2628 nt-0.45□□□□□ -2.48
TY1B-JR1P47098 ORC3YLL004W 1851 nt-0.45□□□□□ -2.48
TY1B-JR1P47098 NPC2YDL046W 522 nt-0.46□□□□□ -2.48
TY1B-JR1P47098 YJL086CYJL086C 369 nt-0.46□□□□□ -2.48
TY1B-JR1P47098 YJR141WYJR141W 1044 nt-0.46□□□□□ -2.48
TY1B-JR1P47098 YOP1YPR028W 543 nt-0.46□□□□□ -2.48
TY1B-JR1P47098 EMC4YGL231C 573 nt-0.47□□□□□ -2.48
TY1B-JR1P47098 CSM4YPL200W 471 nt-0.47□□□□□ -2.48
TY1B-JR1P47098 YHR028W-AYHR028W-A 321 nt-0.47□□□□□ -2.49
TY1B-JR1P47098 NUP82YJL061W 2142 nt-0.47□□□□□ -2.49
TY1B-JR1P47098 YDR182W-AYDR182W-A 204 nt-0.48□□□□□ -2.49
TY1B-JR1P47098 YEL010WYEL010W 351 nt-0.48□□□□□ -2.49
TY1B-JR1P47098 MIC19YFR011C 513 nt-0.48□□□□□ -2.49
TY1B-JR1P47098 tT(UGU)G1tT(UGU)G1 72 nt-0.49□□□□□ -2.49
TY1B-JR1P47098 tT(UGU)G2tT(UGU)G2 72 nt-0.49□□□□□ -2.49
TY1B-JR1P47098 tT(UGU)PtT(UGU)P 72 nt-0.49□□□□□ -2.49
TY1B-JR1P47098 ARV1YLR242C 966 nt-0.49□□□□□ -2.49
Retrieved 100 of 7,029 protein–RNA pairs in 47.9 ms