Protein–RNA interactions for Protein: P40339

RFC4, Replication factor C subunit 4, yeastyeast

Known RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFC4P40339 NBL1YHR199C-A 222 nt0.71□□□□□ -2.3
RFC4P40339 INA22YIR024C 651 nt0.71□□□□□ -2.3
RFC4P40339 HIT1YJR055W 495 nt0.71□□□□□ -2.3
RFC4P40339 YMR175W-AYMR175W-A 195 nt0.71□□□□□ -2.3
RFC4P40339 SPO23YBR250W 1572 nt0.7□□□□□ -2.3
RFC4P40339 SEC1YDR164C 2175 nt0.7□□□□□ -2.3
RFC4P40339 ALY2YJL084C 3141 nt0.7□□□□□ -2.3
RFC4P40339 GPM2YDL021W 936 nt0.7□□□□□ -2.3
RFC4P40339 SCEIQ0160 708 nt0.7□□□□□ -2.3
RFC4P40339 YIL142C-AYIL142C-A 333 nt0.7□□□□□ -2.3
RFC4P40339 ECM9YKR004C 1134 nt0.7□□□□□ -2.3
RFC4P40339 YBR071WYBR071W 636 nt0.7□□□□□ -2.3
RFC4P40339 PRP16YKR086W 3216 nt0.7□□□□□ -2.3
RFC4P40339 MXR1YER042W 555 nt0.69□□□□□ -2.3
RFC4P40339 YER175W-AYER175W-A 165 nt0.69□□□□□ -2.3
RFC4P40339 YJR079WYJR079W 330 nt0.69□□□□□ -2.3
RFC4P40339 YOR248WYOR248W 303 nt0.69□□□□□ -2.3
RFC4P40339 STO1YMR125W 2586 nt0.68□□□□□ -2.3
RFC4P40339 SCW11YGL028C 1629 nt0.68□□□□□ -2.3
RFC4P40339 snR84snR84 550 nt0.68□□□□□ -2.3
RFC4P40339 YDL187CYDL187C 330 nt0.68□□□□□ -2.3
RFC4P40339 SPO13YHR014W 876 nt0.68□□□□□ -2.3
RFC4P40339 YBR032WYBR032W 303 nt0.68□□□□□ -2.3
RFC4P40339 SLM6YBR266C 453 nt0.68□□□□□ -2.3
RFC4P40339 LYS14YDR034C 2373 nt0.68□□□□□ -2.3
RFC4P40339 AI5_ALPHAQ0070 1893 nt0.67□□□□□ -2.3
RFC4P40339 PDE2YOR360C 1581 nt0.67□□□□□ -2.3
RFC4P40339 OST1YJL002C 1431 nt0.67□□□□□ -2.3
RFC4P40339 YDL196WYDL196W 330 nt0.67□□□□□ -2.3
RFC4P40339 NHP2YDL208W 471 nt0.67□□□□□ -2.3
RFC4P40339 YML009C-AYML009C-A 327 nt0.67□□□□□ -2.3
RFC4P40339 SLD3YGL113W 2007 nt0.66□□□□□ -2.3
RFC4P40339 YLR252WYLR252W 306 nt0.66□□□□□ -2.3
RFC4P40339 YBL029C-AYBL029C-A 285 nt0.66□□□□□ -2.3
RFC4P40339 YPR159C-AYPR159C-A 102 nt0.66□□□□□ -2.3
RFC4P40339 FIG4YNL325C 2640 nt0.66□□□□□ -2.3
RFC4P40339 AFR1YDR085C 1863 nt0.65□□□□□ -2.3
RFC4P40339 YDR521WYDR521W 336 nt0.65□□□□□ -2.31
RFC4P40339 GMC2YLR445W 567 nt0.65□□□□□ -2.31
RFC4P40339 CMC4YMR194C-B 222 nt0.65□□□□□ -2.31
RFC4P40339 YOR072W-AYOR072W-A 249 nt0.65□□□□□ -2.31
RFC4P40339 ENV11YGR071C 2583 nt0.65□□□□□ -2.31
RFC4P40339 YJR003CYJR003C 1560 nt0.65□□□□□ -2.31
RFC4P40339 PXA2YKL188C 2562 nt0.64□□□□□ -2.31
RFC4P40339 YDR182W-AYDR182W-A 204 nt0.64□□□□□ -2.31
RFC4P40339 tF(GAA)BtF(GAA)B 73 nt0.64□□□□□ -2.31
RFC4P40339 tF(GAA)FtF(GAA)F 73 nt0.64□□□□□ -2.31
RFC4P40339 tF(GAA)GtF(GAA)G 73 nt0.64□□□□□ -2.31
RFC4P40339 tF(GAA)H1tF(GAA)H1 73 nt0.64□□□□□ -2.31
RFC4P40339 tF(GAA)H2tF(GAA)H2 73 nt0.64□□□□□ -2.31
RFC4P40339 tF(GAA)MtF(GAA)M 73 nt0.64□□□□□ -2.31
RFC4P40339 tF(GAA)P1tF(GAA)P1 73 nt0.64□□□□□ -2.31
RFC4P40339 tF(GAA)P2tF(GAA)P2 73 nt0.64□□□□□ -2.31
RFC4P40339 YJR087WYJR087W 351 nt0.64□□□□□ -2.31
RFC4P40339 SDH2YLL041C 801 nt0.64□□□□□ -2.31
RFC4P40339 YMR031W-AYMR031W-A 327 nt0.64□□□□□ -2.31
RFC4P40339 SLY1YDR189W 2001 nt0.64□□□□□ -2.31
RFC4P40339 RKR1YMR247C 4689 nt0.64□□□□□ -2.31
RFC4P40339 MMS4YBR098W 2076 nt0.63□□□□□ -2.31
RFC4P40339 OCA6YDR067C 675 nt0.63□□□□□ -2.31
RFC4P40339 SWF1YDR126W 1011 nt0.63□□□□□ -2.31
RFC4P40339 tT(AGU)BtT(AGU)B 73 nt0.63□□□□□ -2.31
RFC4P40339 tT(AGU)CtT(AGU)C 73 nt0.63□□□□□ -2.31
RFC4P40339 tT(AGU)DtT(AGU)D 73 nt0.63□□□□□ -2.31
RFC4P40339 tT(AGU)HtT(AGU)H 73 nt0.63□□□□□ -2.31
RFC4P40339 tT(AGU)I1tT(AGU)I1 73 nt0.63□□□□□ -2.31
RFC4P40339 tT(AGU)I2tT(AGU)I2 73 nt0.63□□□□□ -2.31
RFC4P40339 tT(AGU)JtT(AGU)J 73 nt0.63□□□□□ -2.31
RFC4P40339 tT(AGU)N1tT(AGU)N1 73 nt0.63□□□□□ -2.31
RFC4P40339 tT(AGU)N2tT(AGU)N2 73 nt0.63□□□□□ -2.31
RFC4P40339 tT(AGU)O1tT(AGU)O1 73 nt0.63□□□□□ -2.31
RFC4P40339 tT(AGU)O2tT(AGU)O2 73 nt0.63□□□□□ -2.31
RFC4P40339 AFB1YLR040C 675 nt0.63□□□□□ -2.31
RFC4P40339 YLR198CYLR198C 360 nt0.63□□□□□ -2.31
RFC4P40339 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
RFC4P40339 YOL029CYOL029C 606 nt0.63□□□□□ -2.31
RFC4P40339 PPN1YDR452W 2025 nt0.62□□□□□ -2.31
RFC4P40339 YMR153C-AYMR153C-A 336 nt0.62□□□□□ -2.31
RFC4P40339 UTP20YBL004W 7482 nt0.61□□□□□ -2.31
RFC4P40339 YER023C-AYER023C-A 213 nt0.61□□□□□ -2.31
RFC4P40339 YJL047C-AYJL047C-A 135 nt0.61□□□□□ -2.31
RFC4P40339 PHS1YJL097W 654 nt0.61□□□□□ -2.31
RFC4P40339 YLR146W-AYLR146W-A 189 nt0.61□□□□□ -2.31
RFC4P40339 UPS1YLR193C 528 nt0.61□□□□□ -2.31
RFC4P40339 YMR160WYMR160W 2451 nt0.61□□□□□ -2.31
RFC4P40339 DCP1YOL149W 696 nt0.6□□□□□ -2.31
RFC4P40339 LCD1YDR499W 2244 nt0.6□□□□□ -2.31
RFC4P40339 SWI6YLR182W 2412 nt0.59□□□□□ -2.31
RFC4P40339 PAU12YGR294W 363 nt0.59□□□□□ -2.31
RFC4P40339 SPO11YHL022C 1197 nt0.59□□□□□ -2.31
RFC4P40339 YIL059CYIL059C 366 nt0.59□□□□□ -2.31
RFC4P40339 GRX5YPL059W 453 nt0.59□□□□□ -2.31
RFC4P40339 YHR139C-AYHR139C-A 312 nt0.58□□□□□ -2.32
RFC4P40339 YOR032W-AYOR032W-A 201 nt0.58□□□□□ -2.32
RFC4P40339 YPR153WYPR153W 423 nt0.58□□□□□ -2.32
RFC4P40339 YLL032CYLL032C 2478 nt0.58□□□□□ -2.32
RFC4P40339 ALG13YGL047W 609 nt0.57□□□□□ -2.32
RFC4P40339 QCR9YGR183C 201 nt0.57□□□□□ -2.32
RFC4P40339 YIR018C-AYIR018C-A 138 nt0.57□□□□□ -2.32
RFC4P40339 RRT1YBL048W 312 nt0.57□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 80.3 ms