Protein–RNA interactions for Protein: P39980

SIT1, Siderophore iron transporter 1, yeastyeast

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIT1P39980 STH1YIL126W 4080 nt2.43□□□□□ -2.02
SIT1P39980 SRP14YDL092W 441 nt2.43□□□□□ -2.02
SIT1P39980 OLI1Q0130 231 nt2.43□□□□□ -2.02
SIT1P39980 YLR154W-AYLR154W-A 186 nt2.43□□□□□ -2.02
SIT1P39980 RRT15YLR162W-A 189 nt2.43□□□□□ -2.02
SIT1P39980 ZRG17YNR039C 1818 nt2.42□□□□□ -2.02
SIT1P39980 DCP2YNL118C 2913 nt2.42□□□□□ -2.02
SIT1P39980 TRL1YJL087C 2484 nt2.42□□□□□ -2.02
SIT1P39980 COX14YML129C 213 nt2.42□□□□□ -2.02
SIT1P39980 YOL160WYOL160W 342 nt2.42□□□□□ -2.02
SIT1P39980 SEC5YDR166C 2916 nt2.42□□□□□ -2.02
SIT1P39980 MRP10YDL045W-A 288 nt2.41□□□□□ -2.02
SIT1P39980 tK(UUU)DtK(UUU)D 73 nt2.41□□□□□ -2.02
SIT1P39980 tK(UUU)G1tK(UUU)G1 73 nt2.41□□□□□ -2.02
SIT1P39980 tK(UUU)G2tK(UUU)G2 73 nt2.41□□□□□ -2.02
SIT1P39980 tK(UUU)KtK(UUU)K 73 nt2.41□□□□□ -2.02
SIT1P39980 tK(UUU)LtK(UUU)L 73 nt2.41□□□□□ -2.02
SIT1P39980 tK(UUU)OtK(UUU)O 73 nt2.41□□□□□ -2.02
SIT1P39980 tK(UUU)PtK(UUU)P 73 nt2.41□□□□□ -2.02
SIT1P39980 YKL165C-AYKL165C-A 234 nt2.41□□□□□ -2.02
SIT1P39980 YBL012CYBL012C 402 nt2.41□□□□□ -2.02
SIT1P39980 YMR122W-AYMR122W-A 255 nt2.41□□□□□ -2.02
SIT1P39980 YNL338WYNL338W 159 nt2.41□□□□□ -2.02
SIT1P39980 ZIP1YDR285W 2628 nt2.41□□□□□ -2.02
SIT1P39980 YDR341CYDR341C 1824 nt2.4□□□□□ -2.02
SIT1P39980 RGC1YPR115W 3252 nt2.4□□□□□ -2.02
SIT1P39980 IRC8YJL051W 2469 nt2.4□□□□□ -2.03
SIT1P39980 RPL33AYPL143W 324 nt2.4□□□□□ -2.03
SIT1P39980 CDC60YPL160W 3273 nt2.4□□□□□ -2.03
SIT1P39980 snR74snR74 88 nt2.39□□□□□ -2.03
SIT1P39980 YER088C-AYER088C-A 324 nt2.39□□□□□ -2.03
SIT1P39980 RPS27BYHR021C 249 nt2.39□□□□□ -2.03
SIT1P39980 YHR180W-AYHR180W-A 183 nt2.39□□□□□ -2.03
SIT1P39980 YOR218CYOR218C 420 nt2.39□□□□□ -2.03
SIT1P39980 TRA1YHR099W 11235 nt2.39□□□□□ -2.03
SIT1P39980 SPC98YNL126W 2541 nt2.39□□□□□ -2.03
SIT1P39980 NIP100YPL174C 2607 nt2.38□□□□□ -2.03
SIT1P39980 YIL082W-AYIL082W-A 4497 nt2.38□□□□□ -2.03
SIT1P39980 MSC6YOR354C 2079 nt2.38□□□□□ -2.03
SIT1P39980 YDR098C-BYDR098C-B 5268 nt2.38□□□□□ -2.03
SIT1P39980 YDR210C-DYDR210C-D 5268 nt2.38□□□□□ -2.03
SIT1P39980 YDR316W-BYDR316W-B 5268 nt2.38□□□□□ -2.03
SIT1P39980 YDR365W-BYDR365W-B 5268 nt2.38□□□□□ -2.03
SIT1P39980 YER138CYER138C 5268 nt2.38□□□□□ -2.03
SIT1P39980 YER160CYER160C 5268 nt2.38□□□□□ -2.03
SIT1P39980 YGR038C-BYGR038C-B 5268 nt2.38□□□□□ -2.03
SIT1P39980 YGR161C-DYGR161C-D 5268 nt2.38□□□□□ -2.03
SIT1P39980 YJR027WYJR027W 5268 nt2.38□□□□□ -2.03
SIT1P39980 YLR157C-BYLR157C-B 5268 nt2.38□□□□□ -2.03
SIT1P39980 YML039WYML039W 5268 nt2.38□□□□□ -2.03
SIT1P39980 YML045WYML045W 5268 nt2.38□□□□□ -2.03
SIT1P39980 YMR050CYMR050C 5268 nt2.38□□□□□ -2.03
SIT1P39980 YOL103W-BYOL103W-B 5268 nt2.38□□□□□ -2.03
SIT1P39980 YBR012W-BYBR012W-B 5271 nt2.38□□□□□ -2.03
SIT1P39980 YOR142W-BYOR142W-B 5268 nt2.38□□□□□ -2.03
SIT1P39980 YPL257W-BYPL257W-B 5268 nt2.38□□□□□ -2.03
SIT1P39980 YPR158W-BYPR158W-B 5271 nt2.38□□□□□ -2.03
SIT1P39980 Q0092Q0092 141 nt2.38□□□□□ -2.03
SIT1P39980 YJL150WYJL150W 303 nt2.38□□□□□ -2.03
SIT1P39980 YBR182C-AYBR182C-A 195 nt2.38□□□□□ -2.03
SIT1P39980 MMS22YLR320W 4365 nt2.38□□□□□ -2.03
SIT1P39980 BNI1YNL271C 5862 nt2.37□□□□□ -2.03
SIT1P39980 YOL098CYOL098C 3114 nt2.37□□□□□ -2.03
SIT1P39980 SAS3YBL052C 2496 nt2.36□□□□□ -2.03
SIT1P39980 PET309YLR067C 2898 nt2.36□□□□□ -2.03
SIT1P39980 MAK10YEL053C 2202 nt2.36□□□□□ -2.03
SIT1P39980 VPS8YAL002W 3825 nt2.36□□□□□ -2.03
SIT1P39980 YKR075W-AYKR075W-A 270 nt2.36□□□□□ -2.03
SIT1P39980 YKU70YMR284W 1809 nt2.35□□□□□ -2.03
SIT1P39980 NAM7YMR080C 2916 nt2.35□□□□□ -2.03
SIT1P39980 KOG1YHR186C 4674 nt2.35□□□□□ -2.03
SIT1P39980 YMR242W-AYMR242W-A 90 nt2.35□□□□□ -2.03
SIT1P39980 YPR097WYPR097W 3222 nt2.35□□□□□ -2.03
SIT1P39980 SYH1YPL105C 2550 nt2.35□□□□□ -2.03
SIT1P39980 ZIP2YGL249W 2115 nt2.35□□□□□ -2.03
SIT1P39980 RLM1YPL089C 2031 nt2.34□□□□□ -2.03
SIT1P39980 PAU10YDR542W 363 nt2.34□□□□□ -2.03
SIT1P39980 BRP1YGL007W 378 nt2.34□□□□□ -2.03
SIT1P39980 PAU11YGL261C 363 nt2.34□□□□□ -2.03
SIT1P39980 RPL34BYIL052C 366 nt2.34□□□□□ -2.03
SIT1P39980 PAU4YLR461W 363 nt2.34□□□□□ -2.03
SIT1P39980 YOR055WYOR055W 435 nt2.34□□□□□ -2.03
SIT1P39980 YOR376WYOR376W 369 nt2.34□□□□□ -2.03
SIT1P39980 SGF11YPL047W 300 nt2.34□□□□□ -2.03
SIT1P39980 PUT3YKL015W 2940 nt2.34□□□□□ -2.04
SIT1P39980 PHO91YNR013C 2685 nt2.34□□□□□ -2.04
SIT1P39980 RPL37BYDR500C 267 nt2.33□□□□□ -2.04
SIT1P39980 YIR030W-AYIR030W-A 384 nt2.33□□□□□ -2.04
SIT1P39980 YLR342W-AYLR342W-A 174 nt2.33□□□□□ -2.04
SIT1P39980 TRS65YGR166W 1683 nt2.33□□□□□ -2.04
SIT1P39980 YBL005W-BYBL005W-B 5268 nt2.33□□□□□ -2.04
SIT1P39980 MCM10YIL150C 1716 nt2.32□□□□□ -2.04
SIT1P39980 ATP7YKL016C 525 nt2.32□□□□□ -2.04
SIT1P39980 HSH155YMR288W 2916 nt2.31□□□□□ -2.04
SIT1P39980 CAT2YML042W 2013 nt2.31□□□□□ -2.04
SIT1P39980 YGL217CYGL217C 342 nt2.31□□□□□ -2.04
SIT1P39980 YLR140WYLR140W 327 nt2.31□□□□□ -2.04
SIT1P39980 YBL008W-AYBL008W-A 240 nt2.31□□□□□ -2.04
SIT1P39980 YBR131C-AYBR131C-A 90 nt2.31□□□□□ -2.04
SIT1P39980 PRP39YML046W 1890 nt2.31□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 43.1 ms