Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 EFR3YMR212C 2349 nt-0.63□□□□□ -2.51
UFD4P33202 VAB2YEL005C 849 nt-0.63□□□□□ -2.51
UFD4P33202 GIC2YDR309C 1152 nt-0.64□□□□□ -2.51
UFD4P33202 HOT13YKL084W 351 nt-0.64□□□□□ -2.51
UFD4P33202 YML047W-AYML047W-A 366 nt-0.64□□□□□ -2.51
UFD4P33202 SCW11YGL028C 1629 nt-0.64□□□□□ -2.51
UFD4P33202 YLR252WYLR252W 306 nt-0.66□□□□□ -2.51
UFD4P33202 SBH2YER019C-A 267 nt-0.67□□□□□ -2.52
UFD4P33202 RTC6YPL183W-A 282 nt-0.67□□□□□ -2.52
UFD4P33202 YPR074W-AYPR074W-A 171 nt-0.67□□□□□ -2.52
UFD4P33202 REF2YDR195W 1602 nt-0.67□□□□□ -2.52
UFD4P33202 YDL009CYDL009C 324 nt-0.67□□□□□ -2.52
UFD4P33202 snR8snR8 190 nt-0.67□□□□□ -2.52
UFD4P33202 MIC19YFR011C 513 nt-0.67□□□□□ -2.52
UFD4P33202 YLR402WYLR402W 192 nt-0.67□□□□□ -2.52
UFD4P33202 YOR186C-AYOR186C-A 210 nt-0.67□□□□□ -2.52
UFD4P33202 IST3YIR005W 447 nt-0.68□□□□□ -2.52
UFD4P33202 NME1NME1 340 nt-0.68□□□□□ -2.52
UFD4P33202 AEP1YMR064W 1557 nt-0.69□□□□□ -2.52
UFD4P33202 YIR030W-AYIR030W-A 384 nt-0.69□□□□□ -2.52
UFD4P33202 FYV10YIL097W 1551 nt-0.69□□□□□ -2.52
UFD4P33202 YGR042WYGR042W 816 nt-0.7□□□□□ -2.52
UFD4P33202 MRPL24YMR193W 777 nt-0.7□□□□□ -2.52
UFD4P33202 ERV15YBR210W 429 nt-0.7□□□□□ -2.52
UFD4P33202 YEL073CYEL073C 324 nt-0.72□□□□□ -2.52
UFD4P33202 CRG1YHR209W 876 nt-0.72□□□□□ -2.52
UFD4P33202 YJL114WYJL114W 681 nt-0.72□□□□□ -2.52
UFD4P33202 YGL006W-AYGL006W-A 111 nt-0.73□□□□□ -2.53
UFD4P33202 YHR139C-AYHR139C-A 312 nt-0.73□□□□□ -2.53
UFD4P33202 CCE1YKL011C 1062 nt-0.73□□□□□ -2.53
UFD4P33202 ATX1YNL259C 222 nt-0.73□□□□□ -2.53
UFD4P33202 KAR1YNL188W 1302 nt-0.73□□□□□ -2.53
UFD4P33202 CUL3YGR003W 2235 nt-0.73□□□□□ -2.53
UFD4P33202 YCR038W-AYCR038W-A 126 nt-0.73□□□□□ -2.53
UFD4P33202 YLR311CYLR311C 348 nt-0.73□□□□□ -2.53
UFD4P33202 SPO23YBR250W 1572 nt-0.73□□□□□ -2.53
UFD4P33202 YKE2YLR200W 345 nt-0.74□□□□□ -2.53
UFD4P33202 YNL150WYNL150W 408 nt-0.74□□□□□ -2.53
UFD4P33202 PTP2YOR208W 2253 nt-0.75□□□□□ -2.53
UFD4P33202 YIR018C-AYIR018C-A 138 nt-0.75□□□□□ -2.53
UFD4P33202 YKL065W-AYKL065W-A 222 nt-0.75□□□□□ -2.53
UFD4P33202 LCD1YDR499W 2244 nt-0.75□□□□□ -2.53
UFD4P33202 ZIP1YDR285W 2628 nt-0.76□□□□□ -2.53
UFD4P33202 RPM2YML091C 3609 nt-0.76□□□□□ -2.53
UFD4P33202 SRP14YDL092W 441 nt-0.76□□□□□ -2.53
UFD4P33202 YLR101CYLR101C 396 nt-0.76□□□□□ -2.53
UFD4P33202 SOV1YMR066W 2697 nt-0.76□□□□□ -2.53
UFD4P33202 RFX1YLR176C 2436 nt-0.77□□□□□ -2.53
UFD4P33202 DAD1YDR016C 285 nt-0.77□□□□□ -2.53
UFD4P33202 YJR011CYJR011C 786 nt-0.77□□□□□ -2.53
UFD4P33202 ORC3YLL004W 1851 nt-0.77□□□□□ -2.53
UFD4P33202 YHL009W-BYHL009W-B 5409 nt-0.78□□□□□ -2.53
UFD4P33202 HNT1YDL125C 477 nt-0.79□□□□□ -2.54
UFD4P33202 TIM13YGR181W 318 nt-0.79□□□□□ -2.54
UFD4P33202 RPL42BYHR141C 321 nt-0.79□□□□□ -2.54
UFD4P33202 YIL089WYIL089W 618 nt-0.79□□□□□ -2.54
UFD4P33202 RPL42AYNL162W 321 nt-0.79□□□□□ -2.54
UFD4P33202 YOP1YPR028W 543 nt-0.79□□□□□ -2.54
UFD4P33202 YBR184WYBR184W 1572 nt-0.79□□□□□ -2.54
UFD4P33202 YER046W-AYER046W-A 330 nt-0.8□□□□□ -2.54
UFD4P33202 PHO80YOL001W 882 nt-0.8□□□□□ -2.54
UFD4P33202 ARP9YMR033W 1404 nt-0.8□□□□□ -2.54
UFD4P33202 AI5_ALPHAQ0070 1893 nt-0.81□□□□□ -2.54
UFD4P33202 YDR029WYDR029W 315 nt-0.81□□□□□ -2.54
UFD4P33202 BSC3YLR465C 309 nt-0.81□□□□□ -2.54
UFD4P33202 YCR022CYCR022C 345 nt-0.82□□□□□ -2.54
UFD4P33202 YDR194W-AYDR194W-A 153 nt-0.82□□□□□ -2.54
UFD4P33202 GEP7YGL057C 864 nt-0.82□□□□□ -2.54
UFD4P33202 YHL042WYHL042W 453 nt-0.83□□□□□ -2.54
UFD4P33202 TIM10YHR005C-A 282 nt-0.83□□□□□ -2.54
UFD4P33202 tT(UGU)G1tT(UGU)G1 72 nt-0.84□□□□□ -2.54
UFD4P33202 tT(UGU)G2tT(UGU)G2 72 nt-0.84□□□□□ -2.54
UFD4P33202 tT(UGU)PtT(UGU)P 72 nt-0.84□□□□□ -2.54
UFD4P33202 YJL156W-AYJL156W-A 222 nt-0.84□□□□□ -2.54
UFD4P33202 YDR371C-AYDR371C-A 105 nt-0.85□□□□□ -2.55
UFD4P33202 SPO11YHL022C 1197 nt-0.85□□□□□ -2.55
UFD4P33202 YJL032WYJL032W 315 nt-0.85□□□□□ -2.55
UFD4P33202 YPR172WYPR172W 603 nt-0.85□□□□□ -2.55
UFD4P33202 YCL002CYCL002C 792 nt-0.85□□□□□ -2.55
UFD4P33202 snR128snR128 126 nt-0.86□□□□□ -2.55
UFD4P33202 SUT2YPR009W 807 nt-0.86□□□□□ -2.55
UFD4P33202 RRT1YBL048W 312 nt-0.86□□□□□ -2.55
UFD4P33202 FAR3YMR052W 615 nt-0.88□□□□□ -2.55
UFD4P33202 RPS16AYMR143W 432 nt-0.88□□□□□ -2.55
UFD4P33202 RTR2YDR066C 591 nt-0.89□□□□□ -2.55
UFD4P33202 MMS2YGL087C 414 nt-0.89□□□□□ -2.55
UFD4P33202 BET4YJL031C 984 nt-0.89□□□□□ -2.55
UFD4P33202 UPS1YLR193C 528 nt-0.89□□□□□ -2.55
UFD4P33202 LEE1YPL054W 906 nt-0.9□□□□□ -2.55
UFD4P33202 MCM10YIL150C 1716 nt-0.91□□□□□ -2.55
UFD4P33202 COX5BYIL111W 456 nt-0.91□□□□□ -2.55
UFD4P33202 YNL211CYNL211C 261 nt-0.91□□□□□ -2.55
UFD4P33202 YDR344CYDR344C 444 nt-0.92□□□□□ -2.56
UFD4P33202 RPS26AYGL189C 360 nt-0.92□□□□□ -2.56
UFD4P33202 COX8YLR395C 237 nt-0.92□□□□□ -2.56
UFD4P33202 YOL118CYOL118C 309 nt-0.92□□□□□ -2.56
UFD4P33202 YDR114CYDR114C 303 nt-0.92□□□□□ -2.56
UFD4P33202 MUM2YBR057C 1101 nt-0.92□□□□□ -2.56
UFD4P33202 YHR028W-AYHR028W-A 321 nt-0.93□□□□□ -2.56
UFD4P33202 RFA3YJL173C 369 nt-0.93□□□□□ -2.56
Retrieved 100 of 7,029 protein–RNA pairs in 31.3 ms