Protein–RNA interactions for Protein: P32657

CHD1, Chromo domain-containing protein 1, yeastyeast

Predictions only

Length 1,468 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHD1P32657 CSE1YGL238W 2883 nt0.65□□□□□ -2.31
CHD1P32657 PIG1YLR273C 1947 nt0.64□□□□□ -2.31
CHD1P32657 YER038W-AYER038W-A 381 nt0.64□□□□□ -2.31
CHD1P32657 TIM8YJR135W-A 264 nt0.64□□□□□ -2.31
CHD1P32657 RPL22BYFL034C-A 369 nt0.63□□□□□ -2.31
CHD1P32657 SLM6YBR266C 453 nt0.63□□□□□ -2.31
CHD1P32657 PXA2YKL188C 2562 nt0.63□□□□□ -2.31
CHD1P32657 IPI3YNL182C 1668 nt0.63□□□□□ -2.31
CHD1P32657 ENV11YGR071C 2583 nt0.62□□□□□ -2.31
CHD1P32657 YBR221W-AYBR221W-A 105 nt0.61□□□□□ -2.31
CHD1P32657 ECM12YHR021W-A 456 nt0.61□□□□□ -2.31
CHD1P32657 ATP20YPR020W 348 nt0.61□□□□□ -2.31
CHD1P32657 NIP100YPL174C 2607 nt0.6□□□□□ -2.31
CHD1P32657 PDE2YOR360C 1581 nt0.6□□□□□ -2.31
CHD1P32657 SWI5YDR146C 2130 nt0.6□□□□□ -2.31
CHD1P32657 SLY1YDR189W 2001 nt0.59□□□□□ -2.31
CHD1P32657 YDR509WYDR509W 348 nt0.59□□□□□ -2.32
CHD1P32657 LOC1YFR001W 615 nt0.59□□□□□ -2.32
CHD1P32657 BMT5YIL096C 1011 nt0.59□□□□□ -2.32
CHD1P32657 POL32YJR043C 1053 nt0.59□□□□□ -2.32
CHD1P32657 IES4YOR189W 351 nt0.59□□□□□ -2.32
CHD1P32657 YBR063CYBR063C 1215 nt0.59□□□□□ -2.32
CHD1P32657 ALG13YGL047W 609 nt0.58□□□□□ -2.32
CHD1P32657 YOL106WYOL106W 354 nt0.58□□□□□ -2.32
CHD1P32657 YOR364WYOR364W 369 nt0.58□□□□□ -2.32
CHD1P32657 YDL196WYDL196W 330 nt0.57□□□□□ -2.32
CHD1P32657 YDR003W-AYDR003W-A 123 nt0.57□□□□□ -2.32
CHD1P32657 YIL030W-AYIL030W-A 339 nt0.56□□□□□ -2.32
CHD1P32657 YOP1YPR028W 543 nt0.56□□□□□ -2.32
CHD1P32657 STO1YMR125W 2586 nt0.56□□□□□ -2.32
CHD1P32657 YJR140W-AYJR140W-A 150 nt0.55□□□□□ -2.32
CHD1P32657 MMS4YBR098W 2076 nt0.55□□□□□ -2.32
CHD1P32657 SCW11YGL028C 1629 nt0.55□□□□□ -2.32
CHD1P32657 YDR114CYDR114C 303 nt0.54□□□□□ -2.32
CHD1P32657 YHR028W-AYHR028W-A 321 nt0.54□□□□□ -2.32
CHD1P32657 VPS52YDR484W 1926 nt0.54□□□□□ -2.32
CHD1P32657 YHR050W-AYHR050W-A 171 nt0.54□□□□□ -2.32
CHD1P32657 LYS14YDR034C 2373 nt0.53□□□□□ -2.32
CHD1P32657 DBP6YNR038W 1890 nt0.53□□□□□ -2.32
CHD1P32657 BUD26YDR241W 288 nt0.53□□□□□ -2.33
CHD1P32657 ISD11YER048W-A 285 nt0.53□□□□□ -2.33
CHD1P32657 RUF22RUF22 515 nt0.53□□□□□ -2.33
CHD1P32657 YDL152WYDL152W 366 nt0.52□□□□□ -2.33
CHD1P32657 SWF1YDR126W 1011 nt0.52□□□□□ -2.33
CHD1P32657 HTB1YDR224C 396 nt0.52□□□□□ -2.33
CHD1P32657 SEC8YPR055W 3198 nt0.51□□□□□ -2.33
CHD1P32657 YHR063W-AYHR063W-A 336 nt0.51□□□□□ -2.33
CHD1P32657 TDA2YER071C 381 nt0.5□□□□□ -2.33
CHD1P32657 ACF4YJR083C 930 nt0.5□□□□□ -2.33
CHD1P32657 MKT1YNL085W 2493 nt0.5□□□□□ -2.33
CHD1P32657 YLR412C-AYLR412C-A 207 nt0.49□□□□□ -2.33
CHD1P32657 snR79snR79 84 nt0.48□□□□□ -2.33
CHD1P32657 SDH2YLL041C 801 nt0.48□□□□□ -2.33
CHD1P32657 BEM3YPL115C 3387 nt0.48□□□□□ -2.33
CHD1P32657 SRP14YDL092W 441 nt0.48□□□□□ -2.33
CHD1P32657 YOR282WYOR282W 321 nt0.48□□□□□ -2.33
CHD1P32657 GLG1YKR058W 1851 nt0.46□□□□□ -2.34
CHD1P32657 YER158W-AYER158W-A 216 nt0.46□□□□□ -2.34
CHD1P32657 tT(UGU)Q1tT(UGU)Q1 76 nt0.46□□□□□ -2.34
CHD1P32657 UTP10YJL109C 5310 nt0.45□□□□□ -2.34
CHD1P32657 HNT1YDL125C 477 nt0.45□□□□□ -2.34
CHD1P32657 YBL068W-AYBL068W-A 237 nt0.45□□□□□ -2.34
CHD1P32657 RRI2YOL117W 1938 nt0.45□□□□□ -2.34
CHD1P32657 OCA6YDR067C 675 nt0.44□□□□□ -2.34
CHD1P32657 YPL197CYPL197C 414 nt0.43□□□□□ -2.34
CHD1P32657 AI5_ALPHAQ0070 1893 nt0.42□□□□□ -2.34
CHD1P32657 SPO23YBR250W 1572 nt0.42□□□□□ -2.34
CHD1P32657 LCD1YDR499W 2244 nt0.42□□□□□ -2.34
CHD1P32657 MLP1YKR095W 5628 nt0.42□□□□□ -2.34
CHD1P32657 YBR071WYBR071W 636 nt0.41□□□□□ -2.34
CHD1P32657 YBL100W-BYBL100W-B 5313 nt0.41□□□□□ -2.34
CHD1P32657 UPS1YLR193C 528 nt0.41□□□□□ -2.34
CHD1P32657 CUP1-1YHR053C 186 nt0.4□□□□□ -2.35
CHD1P32657 CUP1-2YHR055C 186 nt0.4□□□□□ -2.35
CHD1P32657 LIN1YHR156C 1023 nt0.4□□□□□ -2.35
CHD1P32657 YKL111CYKL111C 336 nt0.4□□□□□ -2.35
CHD1P32657 YPR099CYPR099C 357 nt0.4□□□□□ -2.35
CHD1P32657 YPR153WYPR153W 423 nt0.4□□□□□ -2.35
CHD1P32657 RRT1YBL048W 312 nt0.39□□□□□ -2.35
CHD1P32657 YMR304C-AYMR304C-A 351 nt0.39□□□□□ -2.35
CHD1P32657 KAR1YNL188W 1302 nt0.38□□□□□ -2.35
CHD1P32657 YNL150WYNL150W 408 nt0.38□□□□□ -2.35
CHD1P32657 RPL32YBL092W 393 nt0.38□□□□□ -2.35
CHD1P32657 TIM10YHR005C-A 282 nt0.37□□□□□ -2.35
CHD1P32657 PAN3YKL025C 2040 nt0.37□□□□□ -2.35
CHD1P32657 SLD3YGL113W 2007 nt0.36□□□□□ -2.35
CHD1P32657 MET32YDR253C 576 nt0.36□□□□□ -2.35
CHD1P32657 YJL007CYJL007C 315 nt0.36□□□□□ -2.35
CHD1P32657 snR45snR45 172 nt0.35□□□□□ -2.35
CHD1P32657 BI4Q0120 1917 nt0.35□□□□□ -2.35
CHD1P32657 YHR054CYHR054C 1065 nt0.35□□□□□ -2.35
CHD1P32657 YLR146W-AYLR146W-A 189 nt0.35□□□□□ -2.35
CHD1P32657 SPC2YML055W 537 nt0.35□□□□□ -2.35
CHD1P32657 YDR008CYDR008C 351 nt0.34□□□□□ -2.36
CHD1P32657 YEL030C-AYEL030C-A 315 nt0.34□□□□□ -2.36
CHD1P32657 TAD1YGL243W 1203 nt0.34□□□□□ -2.36
CHD1P32657 RSM27YGR215W 333 nt0.34□□□□□ -2.36
CHD1P32657 RPL26AYLR344W 384 nt0.34□□□□□ -2.36
CHD1P32657 COX7YMR256C 183 nt0.33□□□□□ -2.36
CHD1P32657 SLI15YBR156C 2097 nt0.32□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 92.7 ms