Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 YOR329W-AYOR329W-A 210 nt2.62□□□□□ -1.99
TY1A-ER1P0CX71 SEC7YDR170C 6030 nt2.62□□□□□ -1.99
TY1A-ER1P0CX71 DYN1YKR054C 12279 nt2.62□□□□□ -1.99
TY1A-ER1P0CX71 AIM44YPL158C 2277 nt2.61□□□□□ -1.99
TY1A-ER1P0CX71 YDL196WYDL196W 330 nt2.61□□□□□ -1.99
TY1A-ER1P0CX71 PNC1YGL037C 651 nt2.61□□□□□ -1.99
TY1A-ER1P0CX71 RPL22AYLR061W 366 nt2.61□□□□□ -1.99
TY1A-ER1P0CX71 YBR221W-AYBR221W-A 105 nt2.61□□□□□ -1.99
TY1A-ER1P0CX71 YCL046WYCL046W 324 nt2.61□□□□□ -1.99
TY1A-ER1P0CX71 PIG1YLR273C 1947 nt2.61□□□□□ -1.99
TY1A-ER1P0CX71 YME2YMR302C 2553 nt2.61□□□□□ -1.99
TY1A-ER1P0CX71 FIG4YNL325C 2640 nt2.6□□□□□ -1.99
TY1A-ER1P0CX71 RIF1YBR275C 5751 nt2.6□□□□□ -1.99
TY1A-ER1P0CX71 YHR032W-AYHR032W-A 180 nt2.6□□□□□ -1.99
TY1A-ER1P0CX71 ATP7YKL016C 525 nt2.6□□□□□ -1.99
TY1A-ER1P0CX71 RAD34YDR314C 2079 nt2.6□□□□□ -1.99
TY1A-ER1P0CX71 YNL018CYNL018C 1839 nt2.6□□□□□ -1.99
TY1A-ER1P0CX71 RPO41YFL036W 4056 nt2.6□□□□□ -1.99
TY1A-ER1P0CX71 SAP1YER047C 2694 nt2.59□□□□□ -1.99
TY1A-ER1P0CX71 YHR086W-AYHR086W-A 162 nt2.59□□□□□ -1.99
TY1A-ER1P0CX71 PIP2YOR363C 2991 nt2.58□□□□□ -2
TY1A-ER1P0CX71 NOP14YDL148C 2433 nt2.57□□□□□ -2
TY1A-ER1P0CX71 SPO14YKR031C 5052 nt2.57□□□□□ -2
TY1A-ER1P0CX71 TOM1YDR457W 9807 nt2.57□□□□□ -2
TY1A-ER1P0CX71 NOC3YLR002C 1992 nt2.56□□□□□ -2
TY1A-ER1P0CX71 MDM1YML104C 3384 nt2.56□□□□□ -2
TY1A-ER1P0CX71 YHL015W-AYHL015W-A 84 nt2.56□□□□□ -2
TY1A-ER1P0CX71 YOR102WYOR102W 351 nt2.56□□□□□ -2
TY1A-ER1P0CX71 NAM7YMR080C 2916 nt2.56□□□□□ -2
TY1A-ER1P0CX71 FRE2YKL220C 2136 nt2.56□□□□□ -2
TY1A-ER1P0CX71 MAK10YEL053C 2202 nt2.56□□□□□ -2
TY1A-ER1P0CX71 HAL9YOL089C 3093 nt2.55□□□□□ -2
TY1A-ER1P0CX71 PAU3YCR104W 375 nt2.55□□□□□ -2
TY1A-ER1P0CX71 BRP1YGL007W 378 nt2.55□□□□□ -2
TY1A-ER1P0CX71 MAD1YGL086W 2250 nt2.55□□□□□ -2
TY1A-ER1P0CX71 SBE22YHR103W 2559 nt2.55□□□□□ -2
TY1A-ER1P0CX71 RPS22AYJL190C 393 nt2.55□□□□□ -2
TY1A-ER1P0CX71 YBL109WYBL109W 336 nt2.55□□□□□ -2
TY1A-ER1P0CX71 PTP2YOR208W 2253 nt2.55□□□□□ -2
TY1A-ER1P0CX71 ACM1YPL267W 630 nt2.55□□□□□ -2
TY1A-ER1P0CX71 MMS1YPR164W 4224 nt2.55□□□□□ -2
TY1A-ER1P0CX71 JSN1YJR091C 3276 nt2.55□□□□□ -2
TY1A-ER1P0CX71 EDS1YBR033W 2760 nt2.54□□□□□ -2
TY1A-ER1P0CX71 tQ(UUG)BtQ(UUG)B 72 nt2.54□□□□□ -2
TY1A-ER1P0CX71 YOR314W-AYOR314W-A 111 nt2.54□□□□□ -2
TY1A-ER1P0CX71 LCL1YPL056C 306 nt2.54□□□□□ -2
TY1A-ER1P0CX71 ECM29YHL030W 5607 nt2.54□□□□□ -2
TY1A-ER1P0CX71 TRS130YMR218C 3309 nt2.53□□□□□ -2
TY1A-ER1P0CX71 TUS1YLR425W 3924 nt2.53□□□□□ -2
TY1A-ER1P0CX71 YJL022WYJL022W 309 nt2.53□□□□□ -2
TY1A-ER1P0CX71 YPR203WYPR203W 309 nt2.53□□□□□ -2
TY1A-ER1P0CX71 VPS8YAL002W 3825 nt2.53□□□□□ -2
TY1A-ER1P0CX71 ILS1YBL076C 3219 nt2.52□□□□□ -2.01
TY1A-ER1P0CX71 PBY1YBR094W 2262 nt2.52□□□□□ -2.01
TY1A-ER1P0CX71 RPL31AYDL075W 342 nt2.52□□□□□ -2.01
TY1A-ER1P0CX71 YCL001W-BYCL001W-B 255 nt2.52□□□□□ -2.01
TY1A-ER1P0CX71 SLD3YGL113W 2007 nt2.52□□□□□ -2.01
TY1A-ER1P0CX71 PRP8YHR165C 7242 nt2.52□□□□□ -2.01
TY1A-ER1P0CX71 AHC1YOR023C 1701 nt2.51□□□□□ -2.01
TY1A-ER1P0CX71 BNR1YIL159W 4128 nt2.51□□□□□ -2.01
TY1A-ER1P0CX71 HSH155YMR288W 2916 nt2.51□□□□□ -2.01
TY1A-ER1P0CX71 tL(UAG)JtL(UAG)J 82 nt2.51□□□□□ -2.01
TY1A-ER1P0CX71 tL(UAG)L1tL(UAG)L1 82 nt2.51□□□□□ -2.01
TY1A-ER1P0CX71 tL(UAG)L2tL(UAG)L2 82 nt2.51□□□□□ -2.01
TY1A-ER1P0CX71 KTI11YBL071W-A 249 nt2.51□□□□□ -2.01
TY1A-ER1P0CX71 POL3YDL102W 3294 nt2.51□□□□□ -2.01
TY1A-ER1P0CX71 YLR035C-AYLR035C-A 3468 nt2.51□□□□□ -2.01
TY1A-ER1P0CX71 CAT2YML042W 2013 nt2.51□□□□□ -2.01
TY1A-ER1P0CX71 NUP100YKL068W 2880 nt2.51□□□□□ -2.01
TY1A-ER1P0CX71 DGR2YKL121W 2559 nt2.51□□□□□ -2.01
TY1A-ER1P0CX71 MET18YIL128W 3099 nt2.5□□□□□ -2.01
TY1A-ER1P0CX71 YDR209CYDR209C 414 nt2.5□□□□□ -2.01
TY1A-ER1P0CX71 APL2YKL135C 2181 nt2.5□□□□□ -2.01
TY1A-ER1P0CX71 YMR326CYMR326C 309 nt2.49□□□□□ -2.01
TY1A-ER1P0CX71 ENV11YGR071C 2583 nt2.49□□□□□ -2.01
TY1A-ER1P0CX71 MLH3YPL164C 2148 nt2.48□□□□□ -2.01
TY1A-ER1P0CX71 GEA1YJR031C 4227 nt2.48□□□□□ -2.01
TY1A-ER1P0CX71 ISW1YBR245C 3390 nt2.48□□□□□ -2.01
TY1A-ER1P0CX71 YPL044CYPL044C 549 nt2.47□□□□□ -2.01
TY1A-ER1P0CX71 BPT1YLL015W 4680 nt2.47□□□□□ -2.01
TY1A-ER1P0CX71 PHO91YNR013C 2685 nt2.46□□□□□ -2.01
TY1A-ER1P0CX71 BUD2YKL092C 3315 nt2.46□□□□□ -2.02
TY1A-ER1P0CX71 CYR1YJL005W 6081 nt2.45□□□□□ -2.02
TY1A-ER1P0CX71 TFB5YDR079C-A 219 nt2.45□□□□□ -2.02
TY1A-ER1P0CX71 RPS29AYLR388W 171 nt2.45□□□□□ -2.02
TY1A-ER1P0CX71 APL5YPL195W 2799 nt2.45□□□□□ -2.02
TY1A-ER1P0CX71 FAR11YNL127W 2862 nt2.44□□□□□ -2.02
TY1A-ER1P0CX71 HMI1YOL095C 2121 nt2.44□□□□□ -2.02
TY1A-ER1P0CX71 ATG11YPR049C 3537 nt2.44□□□□□ -2.02
TY1A-ER1P0CX71 SRO77YBL106C 3033 nt2.44□□□□□ -2.02
TY1A-ER1P0CX71 YDR544CYDR544C 429 nt2.44□□□□□ -2.02
TY1A-ER1P0CX71 YKL165C-AYKL165C-A 234 nt2.44□□□□□ -2.02
TY1A-ER1P0CX71 SAP190YKR028W 3102 nt2.43□□□□□ -2.02
TY1A-ER1P0CX71 COP1YDL145C 3606 nt2.43□□□□□ -2.02
TY1A-ER1P0CX71 YDR239CYDR239C 2364 nt2.43□□□□□ -2.02
TY1A-ER1P0CX71 CTF4YPR135W 2784 nt2.43□□□□□ -2.02
TY1A-ER1P0CX71 ESC1YMR219W 4977 nt2.42□□□□□ -2.02
TY1A-ER1P0CX71 IES6YEL044W 501 nt2.42□□□□□ -2.02
TY1A-ER1P0CX71 YIL156W-BYIL156W-B 222 nt2.42□□□□□ -2.02
TY1A-ER1P0CX71 CDC60YPL160W 3273 nt2.42□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 25.7 ms