Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 AF201337.1-201ENST00000520239 748 ntBASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 AL121832.2-201ENST00000610979 668 ntBASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV23-1A0A0A0MS06 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 AL050303.2-201ENST00000619798 666 ntBASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV23-1A0A0A0MS06 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.96■□□□□ 0.3
TRBV23-1A0A0A0MS06 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV23-1A0A0A0MS06 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.96■□□□□ 0.3
TRBV23-1A0A0A0MS06 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.96■□□□□ 0.3
TRBV23-1A0A0A0MS06 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV23-1A0A0A0MS06 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 MCRIP2P1-201ENST00000394346 511 ntBASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 NCF1B-203ENST00000435988 1254 ntBASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 AC105036.2-201ENST00000569468 176 ntBASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRBV23-1A0A0A0MS06 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 AC005229.4-201ENST00000610085 2198 ntBASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 GPX1P1-201ENST00000388829 606 ntBASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 AC027702.1-201ENST00000563810 1770 ntBASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms