Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
PPARGC1BQ86YN6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PPARGC1BQ86YN6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
PPARGC1BQ86YN6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
PPARGC1BQ86YN6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
PPARGC1BQ86YN6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC31.85■■■□□ 2.69
PPARGC1BQ86YN6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC31.85■■■□□ 2.69
PPARGC1BQ86YN6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
PPARGC1BQ86YN6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PPARGC1BQ86YN6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PPARGC1BQ86YN6 CYP21A1P-202ENST00000354927 1481 ntBASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 KRT17P1-201ENST00000399211 1546 ntBASIC31.84■■■□□ 2.69
PPARGC1BQ86YN6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
PPARGC1BQ86YN6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PPARGC1BQ86YN6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC31.83■■■□□ 2.69
PPARGC1BQ86YN6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PPARGC1BQ86YN6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PPARGC1BQ86YN6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PPARGC1BQ86YN6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.69
PPARGC1BQ86YN6 MIR2861-201ENST00000636310 90 ntBASIC31.83■■■□□ 2.69
PPARGC1BQ86YN6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PPARGC1BQ86YN6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PPARGC1BQ86YN6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC31.83■■■□□ 2.69
PPARGC1BQ86YN6 AC010980.2-201ENST00000587099 1412 ntBASIC31.83■■■□□ 2.69
PPARGC1BQ86YN6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.69
PPARGC1BQ86YN6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
PPARGC1BQ86YN6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 GUSBP6-202ENST00000438529 1198 ntBASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 AC098934.4-201ENST00000564127 592 ntBASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 FAM21FP-204ENST00000608637 956 ntBASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 MARS-234ENST00000630571 216 ntTSL 5 BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 MARS-235ENST00000630803 183 ntTSL 3 BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC31.82■■■□□ 2.68
PPARGC1BQ86YN6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PPARGC1BQ86YN6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PPARGC1BQ86YN6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC31.81■■■□□ 2.68
PPARGC1BQ86YN6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PPARGC1BQ86YN6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PPARGC1BQ86YN6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC31.81■■■□□ 2.68
PPARGC1BQ86YN6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC31.81■■■□□ 2.68
PPARGC1BQ86YN6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
PPARGC1BQ86YN6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
PPARGC1BQ86YN6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
PPARGC1BQ86YN6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC31.81■■■□□ 2.68
PPARGC1BQ86YN6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC31.81■■■□□ 2.68
PPARGC1BQ86YN6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PPARGC1BQ86YN6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PPARGC1BQ86YN6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
PPARGC1BQ86YN6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PPARGC1BQ86YN6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC31.8■■■□□ 2.68
PPARGC1BQ86YN6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
PPARGC1BQ86YN6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PPARGC1BQ86YN6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PPARGC1BQ86YN6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PPARGC1BQ86YN6 SAPCD2P1-201ENST00000395413 1184 ntBASIC31.8■■■□□ 2.68
PPARGC1BQ86YN6 NCF1B-203ENST00000435988 1254 ntBASIC31.8■■■□□ 2.68
PPARGC1BQ86YN6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC31.8■■■□□ 2.68
PPARGC1BQ86YN6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC31.8■■■□□ 2.68
PPARGC1BQ86YN6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PPARGC1BQ86YN6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PPARGC1BQ86YN6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PPARGC1BQ86YN6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PPARGC1BQ86YN6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC31.79■■■□□ 2.68
PPARGC1BQ86YN6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PPARGC1BQ86YN6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PPARGC1BQ86YN6 AF201337.1-201ENST00000520239 748 ntBASIC31.79■■■□□ 2.68
PPARGC1BQ86YN6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC31.79■■■□□ 2.68
PPARGC1BQ86YN6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC31.79■■■□□ 2.68
PPARGC1BQ86YN6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC31.79■■■□□ 2.68
PPARGC1BQ86YN6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
PPARGC1BQ86YN6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC31.79■■■□□ 2.68
PPARGC1BQ86YN6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC31.79■■■□□ 2.68
PPARGC1BQ86YN6 AL020996.1-203ENST00000536896 2307 ntBASIC31.78■■■□□ 2.68
PPARGC1BQ86YN6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC31.78■■■□□ 2.68
PPARGC1BQ86YN6 AP005212.1-201ENST00000581547 1997 ntBASIC31.78■■■□□ 2.68
PPARGC1BQ86YN6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms