Protein–RNA interactions for Protein: Q08417

RSB1, Sphingoid long-chain base transporter RSB1, yeastyeast

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSB1Q08417 PRP8YHR165C 7242 nt2.8□□□□□ -1.96
RSB1Q08417 KAP104YBR017C 2757 nt2.8□□□□□ -1.96
RSB1Q08417 PXA2YKL188C 2562 nt2.8□□□□□ -1.96
RSB1Q08417 EFR3YMR212C 2349 nt2.8□□□□□ -1.96
RSB1Q08417 LRE1YCL051W 1752 nt2.8□□□□□ -1.96
RSB1Q08417 SGF11YPL047W 300 nt2.8□□□□□ -1.96
RSB1Q08417 SSQ1YLR369W 1974 nt2.8□□□□□ -1.96
RSB1Q08417 YPR089WYPR089W 2667 nt2.79□□□□□ -1.96
RSB1Q08417 SIN3YOL004W 4611 nt2.79□□□□□ -1.96
RSB1Q08417 SEF1YBL066C 3447 nt2.79□□□□□ -1.96
RSB1Q08417 RPS27BYHR021C 249 nt2.79□□□□□ -1.96
RSB1Q08417 VPS34YLR240W 2628 nt2.79□□□□□ -1.96
RSB1Q08417 DUG2YBR281C 2637 nt2.79□□□□□ -1.96
RSB1Q08417 YPL216WYPL216W 3309 nt2.79□□□□□ -1.96
RSB1Q08417 YLR149CYLR149C 2193 nt2.78□□□□□ -1.96
RSB1Q08417 INP2YMR163C 2118 nt2.78□□□□□ -1.96
RSB1Q08417 RAX2YLR084C 3663 nt2.78□□□□□ -1.96
RSB1Q08417 MSB2YGR014W 3921 nt2.78□□□□□ -1.96
RSB1Q08417 YOR381W-AYOR381W-A 168 nt2.78□□□□□ -1.96
RSB1Q08417 YBR131C-AYBR131C-A 90 nt2.78□□□□□ -1.96
RSB1Q08417 CUL3YGR003W 2235 nt2.78□□□□□ -1.96
RSB1Q08417 IRR1YIL026C 3453 nt2.78□□□□□ -1.96
RSB1Q08417 KSP1YHR082C 3090 nt2.77□□□□□ -1.97
RSB1Q08417 FIR1YER032W 2631 nt2.77□□□□□ -1.97
RSB1Q08417 snR70snR70 164 nt2.77□□□□□ -1.97
RSB1Q08417 BUB1YGR188C 3066 nt2.77□□□□□ -1.97
RSB1Q08417 NIP100YPL174C 2607 nt2.76□□□□□ -1.97
RSB1Q08417 NAB6YML117W 3405 nt2.76□□□□□ -1.97
RSB1Q08417 tW(CCA)G1tW(CCA)G1 72 nt2.76□□□□□ -1.97
RSB1Q08417 tW(CCA)G2tW(CCA)G2 72 nt2.76□□□□□ -1.97
RSB1Q08417 tW(CCA)JtW(CCA)J 72 nt2.76□□□□□ -1.97
RSB1Q08417 tW(CCA)KtW(CCA)K 72 nt2.76□□□□□ -1.97
RSB1Q08417 tW(CCA)MtW(CCA)M 72 nt2.76□□□□□ -1.97
RSB1Q08417 tW(CCA)PtW(CCA)P 72 nt2.76□□□□□ -1.97
RSB1Q08417 YLR146W-AYLR146W-A 189 nt2.76□□□□□ -1.97
RSB1Q08417 RPL33AYPL143W 324 nt2.76□□□□□ -1.97
RSB1Q08417 SPO22YIL073C 2928 nt2.76□□□□□ -1.97
RSB1Q08417 YLR278CYLR278C 4026 nt2.76□□□□□ -1.97
RSB1Q08417 VPH1YOR270C 2523 nt2.75□□□□□ -1.97
RSB1Q08417 MMS22YLR320W 4365 nt2.75□□□□□ -1.97
RSB1Q08417 FMP16YDR070C 282 nt2.75□□□□□ -1.97
RSB1Q08417 YBR178WYBR178W 375 nt2.75□□□□□ -1.97
RSB1Q08417 YIL082W-AYIL082W-A 4497 nt2.74□□□□□ -1.97
RSB1Q08417 RTT10YPL183C 3042 nt2.74□□□□□ -1.97
RSB1Q08417 SSN2YDR443C 4263 nt2.74□□□□□ -1.97
RSB1Q08417 GCV2YMR189W 3105 nt2.74□□□□□ -1.97
RSB1Q08417 GRR1YJR090C 3456 nt2.74□□□□□ -1.97
RSB1Q08417 STB4YMR019W 2850 nt2.74□□□□□ -1.97
RSB1Q08417 TCB2YNL087W 3537 nt2.73□□□□□ -1.97
RSB1Q08417 YIL080WYIL080W 4722 nt2.73□□□□□ -1.97
RSB1Q08417 PNC1YGL037C 651 nt2.73□□□□□ -1.97
RSB1Q08417 RPS22AYJL190C 393 nt2.73□□□□□ -1.97
RSB1Q08417 YOR161W-BYOR161W-B 261 nt2.73□□□□□ -1.97
RSB1Q08417 DNA2YHR164C 4569 nt2.73□□□□□ -1.97
RSB1Q08417 YBR184WYBR184W 1572 nt2.73□□□□□ -1.97
RSB1Q08417 MET6YER091C 2304 nt2.73□□□□□ -1.97
RSB1Q08417 PEP3YLR148W 2757 nt2.72□□□□□ -1.97
RSB1Q08417 SDC25YLL016W 3147 nt2.72□□□□□ -1.97
RSB1Q08417 SWA2YDR320C 2007 nt2.72□□□□□ -1.97
RSB1Q08417 SPO75YLL005C 2607 nt2.72□□□□□ -1.97
RSB1Q08417 YNL114CYNL114C 372 nt2.72□□□□□ -1.97
RSB1Q08417 snR43snR43 209 nt2.72□□□□□ -1.97
RSB1Q08417 snR52snR52 92 nt2.72□□□□□ -1.97
RSB1Q08417 CLN3YAL040C 1743 nt2.71□□□□□ -1.98
RSB1Q08417 RPH1YER169W 2391 nt2.71□□□□□ -1.98
RSB1Q08417 YAL042C-AYAL042C-A 378 nt2.71□□□□□ -1.98
RSB1Q08417 GIS1YDR096W 2685 nt2.7□□□□□ -1.98
RSB1Q08417 YIL174WYIL174W 228 nt2.7□□□□□ -1.98
RSB1Q08417 YJL222W-AYJL222W-A 228 nt2.7□□□□□ -1.98
RSB1Q08417 YPL150WYPL150W 2706 nt2.7□□□□□ -1.98
RSB1Q08417 SUL1YBR294W 2580 nt2.7□□□□□ -1.98
RSB1Q08417 SPC98YNL126W 2541 nt2.69□□□□□ -1.98
RSB1Q08417 SMY1YKL079W 1971 nt2.69□□□□□ -1.98
RSB1Q08417 RRP12YPL012W 3687 nt2.69□□□□□ -1.98
RSB1Q08417 RIC1YLR039C 3171 nt2.68□□□□□ -1.98
RSB1Q08417 ECM12YHR021W-A 456 nt2.68□□□□□ -1.98
RSB1Q08417 CRS5YOR031W 210 nt2.68□□□□□ -1.98
RSB1Q08417 YPR203WYPR203W 309 nt2.68□□□□□ -1.98
RSB1Q08417 ORC2YBR060C 1863 nt2.67□□□□□ -1.98
RSB1Q08417 snR72snR72 98 nt2.67□□□□□ -1.98
RSB1Q08417 ACB1YGR037C 264 nt2.67□□□□□ -1.98
RSB1Q08417 YHR086W-AYHR086W-A 162 nt2.67□□□□□ -1.98
RSB1Q08417 PTP3YER075C 2787 nt2.66□□□□□ -1.98
RSB1Q08417 SAP1YER047C 2694 nt2.66□□□□□ -1.98
RSB1Q08417 RFX1YLR176C 2436 nt2.66□□□□□ -1.98
RSB1Q08417 YBR277CYBR277C 402 nt2.66□□□□□ -1.98
RSB1Q08417 YKU80YMR106C 1890 nt2.66□□□□□ -1.98
RSB1Q08417 SCH9YHR205W 2475 nt2.66□□□□□ -1.98
RSB1Q08417 BNR1YIL159W 4128 nt2.66□□□□□ -1.98
RSB1Q08417 UTP14YML093W 2700 nt2.66□□□□□ -1.98
RSB1Q08417 VPS16YPL045W 2397 nt2.66□□□□□ -1.98
RSB1Q08417 TAE2YPL009C 3117 nt2.66□□□□□ -1.98
RSB1Q08417 PRP42YDR235W 1635 nt2.65□□□□□ -1.98
RSB1Q08417 AXL1YPR122W 3627 nt2.65□□□□□ -1.98
RSB1Q08417 JSN1YJR091C 3276 nt2.65□□□□□ -1.99
RSB1Q08417 CYR1YJL005W 6081 nt2.65□□□□□ -1.99
RSB1Q08417 ULI1YFR026C 510 nt2.65□□□□□ -1.99
RSB1Q08417 EMC6YLL014W 327 nt2.65□□□□□ -1.99
RSB1Q08417 YBL053WYBL053W 375 nt2.65□□□□□ -1.99
RSB1Q08417 YOR218CYOR218C 420 nt2.65□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 30.8 ms