Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 YDR286CYDR286C 345 nt2.6□□□□□ -1.99
YLR040CQ07988 YOR381W-AYOR381W-A 168 nt2.6□□□□□ -1.99
YLR040CQ07988 VMA9YCL005W-A 222 nt2.6□□□□□ -1.99
YLR040CQ07988 MSB2YGR014W 3921 nt2.6□□□□□ -1.99
YLR040CQ07988 EFR3YMR212C 2349 nt2.59□□□□□ -1.99
YLR040CQ07988 VPS54YDR027C 2670 nt2.59□□□□□ -1.99
YLR040CQ07988 COS111YBR203W 2775 nt2.59□□□□□ -1.99
YLR040CQ07988 YML037CYML037C 1023 nt2.59□□□□□ -1.99
YLR040CQ07988 SNC2YOR327C 348 nt2.59□□□□□ -1.99
YLR040CQ07988 YBR131C-AYBR131C-A 90 nt2.59□□□□□ -1.99
YLR040CQ07988 NAB3YPL190C 2409 nt2.59□□□□□ -2
YLR040CQ07988 CUL3YGR003W 2235 nt2.58□□□□□ -2
YLR040CQ07988 NAB6YML117W 3405 nt2.58□□□□□ -2
YLR040CQ07988 CAF120YNL278W 3183 nt2.58□□□□□ -2
YLR040CQ07988 SWA2YDR320C 2007 nt2.58□□□□□ -2
YLR040CQ07988 snR74snR74 88 nt2.58□□□□□ -2
YLR040CQ07988 COX14YML129C 213 nt2.58□□□□□ -2
YLR040CQ07988 SGS1YMR190C 4344 nt2.58□□□□□ -2
YLR040CQ07988 VPH1YOR270C 2523 nt2.58□□□□□ -2
YLR040CQ07988 SAK1YER129W 3429 nt2.57□□□□□ -2
YLR040CQ07988 PNC1YGL037C 651 nt2.57□□□□□ -2
YLR040CQ07988 RPS27BYHR021C 249 nt2.57□□□□□ -2
YLR040CQ07988 YIL174WYIL174W 228 nt2.57□□□□□ -2
YLR040CQ07988 YIR030W-AYIR030W-A 384 nt2.57□□□□□ -2
YLR040CQ07988 RPS22AYJL190C 393 nt2.57□□□□□ -2
YLR040CQ07988 YJL222W-AYJL222W-A 228 nt2.57□□□□□ -2
YLR040CQ07988 YPP1YGR198W 2454 nt2.57□□□□□ -2
YLR040CQ07988 PTC5YOR090C 1719 nt2.56□□□□□ -2
YLR040CQ07988 PLC1YPL268W 2610 nt2.56□□□□□ -2
YLR040CQ07988 ECM21YBL101C 3354 nt2.56□□□□□ -2
YLR040CQ07988 snR76snR76 109 nt2.56□□□□□ -2
YLR040CQ07988 YME2YMR302C 2553 nt2.56□□□□□ -2
YLR040CQ07988 PFF1YBR074W 2931 nt2.56□□□□□ -2
YLR040CQ07988 YPL216WYPL216W 3309 nt2.56□□□□□ -2
YLR040CQ07988 SSQ1YLR369W 1974 nt2.56□□□□□ -2
YLR040CQ07988 CYR1YJL005W 6081 nt2.56□□□□□ -2
YLR040CQ07988 NUP120YKL057C 3114 nt2.55□□□□□ -2
YLR040CQ07988 RGM1YMR182C 636 nt2.55□□□□□ -2
YLR040CQ07988 MUK1YPL070W 1839 nt2.55□□□□□ -2
YLR040CQ07988 NOP53YPL146C 1368 nt2.55□□□□□ -2
YLR040CQ07988 GEA1YJR031C 4227 nt2.55□□□□□ -2
YLR040CQ07988 VPS35YJL154C 2835 nt2.55□□□□□ -2
YLR040CQ07988 UBP11YKR098C 2154 nt2.54□□□□□ -2
YLR040CQ07988 KSP1YHR082C 3090 nt2.54□□□□□ -2
YLR040CQ07988 ORC2YBR060C 1863 nt2.54□□□□□ -2
YLR040CQ07988 RRP12YPL012W 3687 nt2.54□□□□□ -2
YLR040CQ07988 IKI3YLR384C 4050 nt2.53□□□□□ -2
YLR040CQ07988 ULI1YFR026C 510 nt2.53□□□□□ -2
YLR040CQ07988 VPS34YLR240W 2628 nt2.53□□□□□ -2.01
YLR040CQ07988 AXL1YPR122W 3627 nt2.53□□□□□ -2.01
YLR040CQ07988 SSN2YDR443C 4263 nt2.52□□□□□ -2.01
YLR040CQ07988 YLR149CYLR149C 2193 nt2.52□□□□□ -2.01
YLR040CQ07988 RPL23BYER117W 414 nt2.52□□□□□ -2.01
YLR040CQ07988 INP2YMR163C 2118 nt2.52□□□□□ -2.01
YLR040CQ07988 SGF11YPL047W 300 nt2.52□□□□□ -2.01
YLR040CQ07988 ESL2YKR096W 3588 nt2.51□□□□□ -2.01
YLR040CQ07988 YHR086W-AYHR086W-A 162 nt2.51□□□□□ -2.01
YLR040CQ07988 YOR161W-BYOR161W-B 261 nt2.51□□□□□ -2.01
YLR040CQ07988 BCK1YJL095W 4437 nt2.51□□□□□ -2.01
YLR040CQ07988 DNL4YOR005C 2835 nt2.51□□□□□ -2.01
YLR040CQ07988 YPR089WYPR089W 2667 nt2.51□□□□□ -2.01
YLR040CQ07988 GRR1YJR090C 3456 nt2.51□□□□□ -2.01
YLR040CQ07988 SEF1YBL066C 3447 nt2.51□□□□□ -2.01
YLR040CQ07988 MMS1YPR164W 4224 nt2.5□□□□□ -2.01
YLR040CQ07988 RTT10YPL183C 3042 nt2.5□□□□□ -2.01
YLR040CQ07988 FLO11YIR019C 4104 nt2.49□□□□□ -2.01
YLR040CQ07988 SLH1YGR271W 5904 nt2.49□□□□□ -2.01
YLR040CQ07988 SNF5YBR289W 2718 nt2.49□□□□□ -2.01
YLR040CQ07988 YLR146W-AYLR146W-A 189 nt2.49□□□□□ -2.01
YLR040CQ07988 YBL053WYBL053W 375 nt2.49□□□□□ -2.01
YLR040CQ07988 DUG2YBR281C 2637 nt2.49□□□□□ -2.01
YLR040CQ07988 YBR184WYBR184W 1572 nt2.49□□□□□ -2.01
YLR040CQ07988 REV3YPL167C 4515 nt2.48□□□□□ -2.01
YLR040CQ07988 YDR209CYDR209C 414 nt2.48□□□□□ -2.01
YLR040CQ07988 BUB1YGR188C 3066 nt2.48□□□□□ -2.01
YLR040CQ07988 YEL043WYEL043W 2871 nt2.48□□□□□ -2.01
YLR040CQ07988 SMY1YKL079W 1971 nt2.48□□□□□ -2.01
YLR040CQ07988 PXA2YKL188C 2562 nt2.48□□□□□ -2.01
YLR040CQ07988 YDR239CYDR239C 2364 nt2.47□□□□□ -2.01
YLR040CQ07988 TCB2YNL087W 3537 nt2.47□□□□□ -2.01
YLR040CQ07988 TOP2YNL088W 4287 nt2.47□□□□□ -2.01
YLR040CQ07988 PRP42YDR235W 1635 nt2.47□□□□□ -2.01
YLR040CQ07988 RPL34BYIL052C 366 nt2.47□□□□□ -2.01
YLR040CQ07988 YOR218CYOR218C 420 nt2.47□□□□□ -2.01
YLR040CQ07988 ISW1YBR245C 3390 nt2.47□□□□□ -2.01
YLR040CQ07988 YLL007CYLL007C 1998 nt2.47□□□□□ -2.01
YLR040CQ07988 SRO77YBL106C 3033 nt2.47□□□□□ -2.01
YLR040CQ07988 FMP16YDR070C 282 nt2.46□□□□□ -2.02
YLR040CQ07988 ECM12YHR021W-A 456 nt2.46□□□□□ -2.02
YLR040CQ07988 NOP10YHR072W-A 177 nt2.46□□□□□ -2.02
YLR040CQ07988 FIR1YER032W 2631 nt2.46□□□□□ -2.02
YLR040CQ07988 PRP6YBR055C 2700 nt2.46□□□□□ -2.02
YLR040CQ07988 YKU80YMR106C 1890 nt2.45□□□□□ -2.02
YLR040CQ07988 HRD3YLR207W 2502 nt2.45□□□□□ -2.02
YLR040CQ07988 DNA2YHR164C 4569 nt2.45□□□□□ -2.02
YLR040CQ07988 SWI6YLR182W 2412 nt2.45□□□□□ -2.02
YLR040CQ07988 snR70snR70 164 nt2.45□□□□□ -2.02
YLR040CQ07988 SNU13YEL026W 381 nt2.45□□□□□ -2.02
YLR040CQ07988 YEL073CYEL073C 324 nt2.45□□□□□ -2.02
YLR040CQ07988 YBL109WYBL109W 336 nt2.45□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms