Protein–RNA interactions for Protein: P47013

LCB3, Dihydrosphingosine 1-phosphate phosphatase LCB3, yeastyeast

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB3P47013 YHR028W-AYHR028W-A 321 nt1.6□□□□□ -2.15
LCB3P47013 ATP7YKL016C 525 nt1.6□□□□□ -2.15
LCB3P47013 YPL261CYPL261C 309 nt1.6□□□□□ -2.15
LCB3P47013 MGA2YIR033W 3342 nt1.6□□□□□ -2.15
LCB3P47013 YOR343W-BYOR343W-B 5313 nt1.6□□□□□ -2.15
LCB3P47013 SEC31YDL195W 3822 nt1.59□□□□□ -2.15
LCB3P47013 YDL118WYDL118W 381 nt1.59□□□□□ -2.15
LCB3P47013 YAP6YDR259C 1152 nt1.59□□□□□ -2.15
LCB3P47013 YER088C-AYER088C-A 324 nt1.59□□□□□ -2.15
LCB3P47013 YER137W-AYER137W-A 306 nt1.59□□□□□ -2.15
LCB3P47013 YJL020W-AYJL020W-A 258 nt1.59□□□□□ -2.15
LCB3P47013 HIT1YJR055W 495 nt1.59□□□□□ -2.15
LCB3P47013 AIM9YER080W 1884 nt1.58□□□□□ -2.16
LCB3P47013 LRE1YCL051W 1752 nt1.58□□□□□ -2.16
LCB3P47013 RPL26AYLR344W 384 nt1.58□□□□□ -2.16
LCB3P47013 YML003WYML003W 873 nt1.58□□□□□ -2.16
LCB3P47013 CFT2YLR115W 2580 nt1.58□□□□□ -2.16
LCB3P47013 HCS1YKL017C 2052 nt1.58□□□□□ -2.16
LCB3P47013 DFG16YOR030W 1860 nt1.58□□□□□ -2.16
LCB3P47013 GUP1YGL084C 1683 nt1.58□□□□□ -2.16
LCB3P47013 TFC8YPL007C 1767 nt1.57□□□□□ -2.16
LCB3P47013 YMR045CYMR045C 5268 nt1.57□□□□□ -2.16
LCB3P47013 PCF11YDR228C 1881 nt1.57□□□□□ -2.16
LCB3P47013 YHR073W-AYHR073W-A 177 nt1.57□□□□□ -2.16
LCB3P47013 YHR175W-AYHR175W-A 150 nt1.57□□□□□ -2.16
LCB3P47013 PHS1YJL097W 654 nt1.57□□□□□ -2.16
LCB3P47013 RPS27AYKL156W 249 nt1.57□□□□□ -2.16
LCB3P47013 YBL073WYBL073W 312 nt1.57□□□□□ -2.16
LCB3P47013 VPS34YLR240W 2628 nt1.57□□□□□ -2.16
LCB3P47013 UBR2YLR024C 5619 nt1.57□□□□□ -2.16
LCB3P47013 PEX8YGR077C 1770 nt1.57□□□□□ -2.16
LCB3P47013 GIM4YEL003W 336 nt1.56□□□□□ -2.16
LCB3P47013 ISF1YMR081C 1017 nt1.56□□□□□ -2.16
LCB3P47013 HCH1YNL281W 462 nt1.56□□□□□ -2.16
LCB3P47013 YOR029WYOR029W 336 nt1.56□□□□□ -2.16
LCB3P47013 HHT1YBR010W 411 nt1.56□□□□□ -2.16
LCB3P47013 FMP23YBR047W 528 nt1.56□□□□□ -2.16
LCB3P47013 LHS1YKL073W 2646 nt1.56□□□□□ -2.16
LCB3P47013 SSQ1YLR369W 1974 nt1.56□□□□□ -2.16
LCB3P47013 DAD4YDR320C-A 219 nt1.55□□□□□ -2.16
LCB3P47013 PRE4YFR050C 801 nt1.55□□□□□ -2.16
LCB3P47013 PAU18YLL064C 363 nt1.55□□□□□ -2.16
LCB3P47013 YLR146W-AYLR146W-A 189 nt1.55□□□□□ -2.16
LCB3P47013 YBL012CYBL012C 402 nt1.55□□□□□ -2.16
LCB3P47013 YMR247W-AYMR247W-A 144 nt1.55□□□□□ -2.16
LCB3P47013 PAU6YNR076W 363 nt1.55□□□□□ -2.16
LCB3P47013 YBL108WYBL108W 306 nt1.55□□□□□ -2.16
LCB3P47013 YPL229WYPL229W 621 nt1.55□□□□□ -2.16
LCB3P47013 HDA3YPR179C 1968 nt1.55□□□□□ -2.16
LCB3P47013 OSH6YKR003W 1347 nt1.55□□□□□ -2.16
LCB3P47013 NAB6YML117W 3405 nt1.54□□□□□ -2.16
LCB3P47013 SEC63YOR254C 1992 nt1.54□□□□□ -2.16
LCB3P47013 MSC6YOR354C 2079 nt1.54□□□□□ -2.16
LCB3P47013 YGR250CYGR250C 2346 nt1.54□□□□□ -2.16
LCB3P47013 tR(ACG)Q2tR(ACG)Q2 74 nt1.54□□□□□ -2.16
LCB3P47013 tT(UGU)HtT(UGU)H 72 nt1.54□□□□□ -2.16
LCB3P47013 ABM1YJR108W 372 nt1.54□□□□□ -2.16
LCB3P47013 MCM22YJR135C 720 nt1.54□□□□□ -2.16
LCB3P47013 YOL159C-AYOL159C-A 273 nt1.54□□□□□ -2.16
LCB3P47013 YBR012CYBR012C 420 nt1.54□□□□□ -2.16
LCB3P47013 IRC20YLR247C 4671 nt1.54□□□□□ -2.16
LCB3P47013 SWI5YDR146C 2130 nt1.54□□□□□ -2.16
LCB3P47013 MYO4YAL029C 4416 nt1.54□□□□□ -2.16
LCB3P47013 YER172C-AYER172C-A 381 nt1.53□□□□□ -2.16
LCB3P47013 YGR265WYGR265W 411 nt1.53□□□□□ -2.16
LCB3P47013 YHR210CYHR210C 1026 nt1.53□□□□□ -2.16
LCB3P47013 YJR003CYJR003C 1560 nt1.53□□□□□ -2.16
LCB3P47013 YKL083WYKL083W 615 nt1.53□□□□□ -2.16
LCB3P47013 TMA10YLR327C 261 nt1.53□□□□□ -2.16
LCB3P47013 SEY1YOR165W 2331 nt1.53□□□□□ -2.16
LCB3P47013 YCL046WYCL046W 324 nt1.53□□□□□ -2.16
LCB3P47013 HIR3YJR140C 4947 nt1.53□□□□□ -2.16
LCB3P47013 PXA2YKL188C 2562 nt1.53□□□□□ -2.17
LCB3P47013 SAC3YDR159W 3906 nt1.52□□□□□ -2.17
LCB3P47013 TDA9YML081W 3756 nt1.52□□□□□ -2.17
LCB3P47013 CTR9YOL145C 3234 nt1.52□□□□□ -2.17
LCB3P47013 EMP24YGL200C 612 nt1.52□□□□□ -2.17
LCB3P47013 YGR174W-AYGR174W-A 87 nt1.52□□□□□ -2.17
LCB3P47013 YAL063C-AYAL063C-A 291 nt1.52□□□□□ -2.17
LCB3P47013 IRE1YHR079C 3348 nt1.52□□□□□ -2.17
LCB3P47013 FAB1YFR019W 6837 nt1.51□□□□□ -2.17
LCB3P47013 YGR035CYGR035C 351 nt1.51□□□□□ -2.17
LCB3P47013 ZRG17YNR039C 1818 nt1.51□□□□□ -2.17
LCB3P47013 SWI6YLR182W 2412 nt1.51□□□□□ -2.17
LCB3P47013 YNL144CYNL144C 2223 nt1.51□□□□□ -2.17
LCB3P47013 MAK10YEL053C 2202 nt1.5□□□□□ -2.17
LCB3P47013 YJR039WYJR039W 3366 nt1.5□□□□□ -2.17
LCB3P47013 YHR214C-BYHR214C-B 5382 nt1.5□□□□□ -2.17
LCB3P47013 NOP53YPL146C 1368 nt1.49□□□□□ -2.17
LCB3P47013 RLM1YPL089C 2031 nt1.49□□□□□ -2.17
LCB3P47013 RTR1YER139C 681 nt1.49□□□□□ -2.17
LCB3P47013 YIL059CYIL059C 366 nt1.49□□□□□ -2.17
LCB3P47013 MSH5YDL154W 2706 nt1.49□□□□□ -2.17
LCB3P47013 HSH155YMR288W 2916 nt1.49□□□□□ -2.17
LCB3P47013 EFR3YMR212C 2349 nt1.49□□□□□ -2.17
LCB3P47013 GYP5YPL249C 2685 nt1.48□□□□□ -2.17
LCB3P47013 YDR003W-AYDR003W-A 123 nt1.48□□□□□ -2.17
LCB3P47013 IRC23YOR044W 474 nt1.48□□□□□ -2.17
LCB3P47013 DCP2YNL118C 2913 nt1.47□□□□□ -2.17
LCB3P47013 LYS14YDR034C 2373 nt1.47□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 41.2 ms