Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 tN(GUU)O1tN(GUU)O1 74 nt4.68□□□□□ -1.66
YCK3P39962 tN(GUU)O2tN(GUU)O2 74 nt4.68□□□□□ -1.66
YCK3P39962 tN(GUU)PtN(GUU)P 74 nt4.68□□□□□ -1.66
YCK3P39962 YKL100W-AYKL100W-A 90 nt4.68□□□□□ -1.66
YCK3P39962 SLI15YBR156C 2097 nt4.68□□□□□ -1.66
YCK3P39962 UBP3YER151C 2739 nt4.67□□□□□ -1.66
YCK3P39962 NIP1YMR309C 2439 nt4.67□□□□□ -1.66
YCK3P39962 YBR200W-AYBR200W-A 165 nt4.67□□□□□ -1.66
YCK3P39962 RSC30YHR056C 2652 nt4.67□□□□□ -1.66
YCK3P39962 CDC15YAR019C 2925 nt4.66□□□□□ -1.66
YCK3P39962 HSF1YGL073W 2502 nt4.66□□□□□ -1.66
YCK3P39962 HSX1tR(CCU)J 72 nt4.66□□□□□ -1.66
YCK3P39962 UBA1YKL210W 3075 nt4.66□□□□□ -1.66
YCK3P39962 INP52YNL106C 3552 nt4.65□□□□□ -1.66
YCK3P39962 DCP2YNL118C 2913 nt4.65□□□□□ -1.66
YCK3P39962 COX26YDR119W-A 201 nt4.65□□□□□ -1.67
YCK3P39962 IFH1YLR223C 3258 nt4.65□□□□□ -1.67
YCK3P39962 AGC1YPR021C 2709 nt4.65□□□□□ -1.67
YCK3P39962 TIM9YEL020W-A 264 nt4.64□□□□□ -1.67
YCK3P39962 YGL123C-AYGL123C-A 231 nt4.64□□□□□ -1.67
YCK3P39962 YEL077CYEL077C 3834 nt4.64□□□□□ -1.67
YCK3P39962 SAP155YFR040W 3009 nt4.64□□□□□ -1.67
YCK3P39962 YBR230W-AYBR230W-A 201 nt4.63□□□□□ -1.67
YCK3P39962 YKL050CYKL050C 2769 nt4.62□□□□□ -1.67
YCK3P39962 MCM7YBR202W 2538 nt4.62□□□□□ -1.67
YCK3P39962 SIP4YJL089W 2490 nt4.61□□□□□ -1.67
YCK3P39962 SAP190YKR028W 3102 nt4.6□□□□□ -1.67
YCK3P39962 YDL025W-AYDL025W-A 105 nt4.6□□□□□ -1.67
YCK3P39962 YMR242W-AYMR242W-A 90 nt4.6□□□□□ -1.67
YCK3P39962 NPR3YHL023C 3441 nt4.6□□□□□ -1.67
YCK3P39962 DGR2YKL121W 2559 nt4.59□□□□□ -1.67
YCK3P39962 NEW1YPL226W 3591 nt4.59□□□□□ -1.67
YCK3P39962 SNT2YGL131C 4212 nt4.58□□□□□ -1.68
YCK3P39962 YTA7YGR270W 4140 nt4.58□□□□□ -1.68
YCK3P39962 ARP8YOR141C 2646 nt4.57□□□□□ -1.68
YCK3P39962 HPF1YOL155C 2904 nt4.55□□□□□ -1.68
YCK3P39962 LYS2YBR115C 4179 nt4.55□□□□□ -1.68
YCK3P39962 CDC60YPL160W 3273 nt4.55□□□□□ -1.68
YCK3P39962 MPH1YIR002C 2982 nt4.55□□□□□ -1.68
YCK3P39962 CHO2YGR157W 2610 nt4.54□□□□□ -1.68
YCK3P39962 VID22YLR373C 2706 nt4.54□□□□□ -1.68
YCK3P39962 PHO8YDR481C 1701 nt4.54□□□□□ -1.68
YCK3P39962 EAF1YDR359C 2949 nt4.52□□□□□ -1.69
YCK3P39962 VPS16YPL045W 2397 nt4.52□□□□□ -1.69
YCK3P39962 snR14snR14 160 nt4.52□□□□□ -1.69
YCK3P39962 VPS35YJL154C 2835 nt4.52□□□□□ -1.69
YCK3P39962 SMC1YFL008W 3678 nt4.52□□□□□ -1.69
YCK3P39962 NAM7YMR080C 2916 nt4.52□□□□□ -1.69
YCK3P39962 UBP15YMR304W 3693 nt4.51□□□□□ -1.69
YCK3P39962 PKH2YOL100W 3246 nt4.51□□□□□ -1.69
YCK3P39962 SMT3YDR510W 306 nt4.5□□□□□ -1.69
YCK3P39962 YML054C-AYML054C-A 159 nt4.5□□□□□ -1.69
YCK3P39962 YAL064W-BYAL064W-B 381 nt4.49□□□□□ -1.69
YCK3P39962 NUP120YKL057C 3114 nt4.49□□□□□ -1.69
YCK3P39962 YER172C-AYER172C-A 381 nt4.48□□□□□ -1.69
YCK3P39962 KAR2YJL034W 2049 nt4.48□□□□□ -1.69
YCK3P39962 CDC53YDL132W 2448 nt4.47□□□□□ -1.69
YCK3P39962 CAF130YGR134W 3369 nt4.47□□□□□ -1.69
YCK3P39962 MDM1YML104C 3384 nt4.47□□□□□ -1.69
YCK3P39962 YME2YMR302C 2553 nt4.47□□□□□ -1.69
YCK3P39962 PSY2YNL201C 2577 nt4.47□□□□□ -1.69
YCK3P39962 SDC25YLL016W 3147 nt4.46□□□□□ -1.69
YCK3P39962 PRP22YER013W 3438 nt4.46□□□□□ -1.69
YCK3P39962 TBS1YBR150C 3285 nt4.46□□□□□ -1.7
YCK3P39962 tD(GUC)QtD(GUC)Q 75 nt4.44□□□□□ -1.7
YCK3P39962 KTI11YBL071W-A 249 nt4.44□□□□□ -1.7
YCK3P39962 HAP1YLR256W 4509 nt4.44□□□□□ -1.7
YCK3P39962 SPC110YDR356W 2835 nt4.44□□□□□ -1.7
YCK3P39962 EST2YLR318W 2655 nt4.43□□□□□ -1.7
YCK3P39962 PET127YOR017W 2403 nt4.43□□□□□ -1.7
YCK3P39962 RTP1YMR185W 2946 nt4.43□□□□□ -1.7
YCK3P39962 MBP1YDL056W 2502 nt4.43□□□□□ -1.7
YCK3P39962 RGA2YDR379W 3030 nt4.43□□□□□ -1.7
YCK3P39962 RIM15YFL033C 5313 nt4.42□□□□□ -1.7
YCK3P39962 ADP1YCR011C 3150 nt4.41□□□□□ -1.7
YCK3P39962 RTT10YPL183C 3042 nt4.41□□□□□ -1.7
YCK3P39962 RPS23BYPR132W 438 nt4.41□□□□□ -1.7
YCK3P39962 ORC1YML065W 2745 nt4.41□□□□□ -1.7
YCK3P39962 YBR225WYBR225W 2703 nt4.41□□□□□ -1.7
YCK3P39962 USA1YML029W 2517 nt4.4□□□□□ -1.7
YCK3P39962 GDB1YPR184W 4611 nt4.4□□□□□ -1.7
YCK3P39962 XRS2YDR369C 2565 nt4.4□□□□□ -1.7
YCK3P39962 YMR317WYMR317W 3423 nt4.4□□□□□ -1.71
YCK3P39962 YJR085CYJR085C 318 nt4.4□□□□□ -1.71
YCK3P39962 PSK1YAL017W 4071 nt4.4□□□□□ -1.71
YCK3P39962 RSF2YJR127C 4143 nt4.4□□□□□ -1.71
YCK3P39962 IST2YBR086C 2841 nt4.39□□□□□ -1.71
YCK3P39962 YDL159C-BYDL159C-B 177 nt4.39□□□□□ -1.71
YCK3P39962 YOR161W-AYOR161W-A 81 nt4.39□□□□□ -1.71
YCK3P39962 VID27YNL212W 2349 nt4.39□□□□□ -1.71
YCK3P39962 MET10YFR030W 3108 nt4.38□□□□□ -1.71
YCK3P39962 TAE2YPL009C 3117 nt4.38□□□□□ -1.71
YCK3P39962 HFM1YGL251C 3564 nt4.38□□□□□ -1.71
YCK3P39962 ITC1YGL133W 3795 nt4.37□□□□□ -1.71
YCK3P39962 CHS3YBR023C 3498 nt4.37□□□□□ -1.71
YCK3P39962 MET6YER091C 2304 nt4.37□□□□□ -1.71
YCK3P39962 GLT1YDL171C 6438 nt4.37□□□□□ -1.71
YCK3P39962 RAD5YLR032W 3510 nt4.37□□□□□ -1.71
YCK3P39962 MNL2YLR057W 2550 nt4.37□□□□□ -1.71
YCK3P39962 MDR1YGR100W 2853 nt4.36□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms