Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 RPL23A-207ENST00000578181 593 ntTSL 23.6□□□□□ -1.833e-18■■■□□ 17.5
DKC1O60832 SOX5-213ENST00000541847 758 ntTSL 3 BASIC9.65□□□□□ -0.865e-7■■■□□ 17.5
DKC1O60832 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.049e-7■■■□□ 17.5
DKC1O60832 CLEC16A-209ENST00000465491 1103 ntTSL 317.17■□□□□ 0.342e-7■■■□□ 17.5
DKC1O60832 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.292e-7■■■□□ 17.5
DKC1O60832 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.3■□□□□ 0.042e-7■■■□□ 17.5
DKC1O60832 RPS2-206ENST00000527302 719 ntTSL 328.95■■■□□ 2.221e-323■■■□□ 17.5
DKC1O60832 RPS2-207ENST00000527826 837 ntTSL 1 (best)28.59■■■□□ 2.171e-323■■■□□ 17.5
DKC1O60832 RPS2-204ENST00000526908 638 ntTSL 222.79■■□□□ 1.241e-323■■■□□ 17.5
DKC1O60832 SNORA64-201ENST00000384674 134 ntBASIC2.35□□□□□ -2.031e-323■■■□□ 17.5
DKC1O60832 PFKL-205ENST00000466134 5986 ntTSL 222.38■■□□□ 1.172e-9■■■□□ 17.5
DKC1O60832 PFKL-207ENST00000474114 6007 ntTSL 1 (best)20.15■□□□□ 0.822e-9■■■□□ 17.5
DKC1O60832 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.562e-9■■■□□ 17.5
DKC1O60832 PFKL-202ENST00000397961 3390 ntTSL 1 (best)15.59■□□□□ 0.092e-9■■■□□ 17.5
DKC1O60832 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.773e-22■■■□□ 17.5
DKC1O60832 DCAF1-202ENST00000423656 5946 ntAPPRIS P4 TSL 5 BASIC9.86□□□□□ -0.833e-22■■■□□ 17.5
DKC1O60832 SNORD116-19-201ENST00000384729 92 ntBASIC-1.48□□□□□ -2.659e-8■■■□□ 17.5
DKC1O60832 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC10.76□□□□□ -0.695e-8■■■□□ 17.4
DKC1O60832 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC9.15□□□□□ -0.945e-8■■■□□ 17.4
DKC1O60832 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.095e-8■■■□□ 17.4
DKC1O60832 ATP11A-208ENST00000459908 4516 ntTSL 212.03□□□□□ -0.484e-8■■■□□ 17.4
DKC1O60832 ATP11A-204ENST00000418678 3163 ntAPPRIS ALT2 TSL 1 (best)8.07□□□□□ -1.124e-8■■■□□ 17.4
DKC1O60832 FGL1-204ENST00000398056 1967 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.484e-31■■■□□ 17.4
DKC1O60832 SRP68-211ENST00000592704 1941 ntTSL 229.41■■■□□ 2.33e-7■■■□□ 17.4
DKC1O60832 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.77■■□□□ 1.883e-7■■■□□ 17.4
DKC1O60832 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.173e-7■■■□□ 17.4
DKC1O60832 SRP68-205ENST00000586859 703 ntTSL 315.99■□□□□ 0.153e-7■■■□□ 17.4
DKC1O60832 SRP68-212ENST00000602720 2037 ntTSL 2 BASIC13.06□□□□□ -0.323e-7■■■□□ 17.4
DKC1O60832 SRP68-203ENST00000542536 1714 ntTSL 212.85□□□□□ -0.353e-7■■■□□ 17.4
DKC1O60832 SRP68-208ENST00000588736 2532 ntTSL 210.59□□□□□ -0.713e-7■■■□□ 17.4
DKC1O60832 NOL4L-209ENST00000485364 885 ntTSL 1 (best)26.83■■□□□ 1.896e-7■■■□□ 17.3
DKC1O60832 PLCB1-213ENST00000626114 598 ntTSL 511.74□□□□□ -0.531e-6■■■□□ 17.3
DKC1O60832 PLCB1-227ENST00000636825 3020 ntTSL 58.53□□□□□ -1.041e-6■■■□□ 17.3
DKC1O60832 PLCB1-221ENST00000635830 3237 ntTSL 57.73□□□□□ -1.171e-6■■■□□ 17.3
DKC1O60832 PLCB1-226ENST00000636784 100 ntTSL 53.99□□□□□ -1.771e-6■■■□□ 17.3
DKC1O60832 TCP1-218ENST00000546204 566 ntTSL 29.8□□□□□ -0.841e-323■■■□□ 17.3
DKC1O60832 SNHG17-207ENST00000449469 2138 ntTSL 218.04■□□□□ 0.481e-323■■■□□ 17.3
DKC1O60832 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.37□□□□□ -1.872e-7■■■□□ 17.3
DKC1O60832 RPS3-220ENST00000534555 387 ntTSL 317.66■□□□□ 0.429e-21■■■□□ 17.2
DKC1O60832 RPS3-208ENST00000527273 390 ntTSL 312.95□□□□□ -0.349e-21■■■□□ 17.2
DKC1O60832 RPS3-211ENST00000528847 639 ntTSL 511.19□□□□□ -0.629e-21■■■□□ 17.2
DKC1O60832 RPS3-214ENST00000530164 1878 ntTSL 1 (best) BASIC9.96□□□□□ -0.819e-21■■■□□ 17.2
DKC1O60832 SNORD15A-201ENST00000384214 148 ntBASIC8.51□□□□□ -1.059e-21■■■□□ 17.2
DKC1O60832 WDR1-209ENST00000505851 715 ntTSL 224.66■■□□□ 1.541e-8■■■□□ 17.2
DKC1O60832 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.64■□□□□ 0.731e-8■■■□□ 17.2
DKC1O60832 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.87■□□□□ 0.291e-8■■■□□ 17.2
DKC1O60832 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.111e-8■■■□□ 17.2
DKC1O60832 WDR1-216ENST00000514319 719 ntTSL 515.31■□□□□ 0.041e-8■■■□□ 17.2
DKC1O60832 WDR1-211ENST00000508079 812 ntTSL 313.96□□□□□ -0.171e-8■■■□□ 17.2
DKC1O60832 WDR1-204ENST00000499869 3054 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.481e-8■■■□□ 17.2
DKC1O60832 WDR1-217ENST00000515018 274 ntTSL 38.46□□□□□ -1.061e-8■■■□□ 17.2
DKC1O60832 WDR1-201ENST00000264785 549 ntTSL 48.03□□□□□ -1.121e-8■■■□□ 17.2
DKC1O60832 TRIO-204ENST00000502816 736 ntTSL 227.86■■■□□ 2.058e-7■■■□□ 17.2
DKC1O60832 EIF4G1-224ENST00000444861 2384 ntTSL 1 (best)22.85■■□□□ 1.253e-6■■■□□ 17.2
DKC1O60832 TRIO-207ENST00000505971 605 ntTSL 322.82■■□□□ 1.248e-7■■■□□ 17.2
DKC1O60832 CMTM3-206ENST00000563672 460 ntTSL 422.77■■□□□ 1.241e-9■■■□□ 17.2
DKC1O60832 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.37■■□□□ 1.018e-7■■■□□ 17.2
DKC1O60832 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.59■□□□□ 0.892e-12■■■□□ 17.2
DKC1O60832 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.838e-7■■■□□ 17.2
DKC1O60832 CMTM3-204ENST00000562357 792 ntTSL 420.06■□□□□ 0.81e-9■■■□□ 17.2
DKC1O60832 ASCC2-219ENST00000487486 1596 ntTSL 219.24■□□□□ 0.671e-9■■■□□ 17.2
DKC1O60832 EIF4G1-208ENST00000413967 2808 ntTSL 218.73■□□□□ 0.593e-6■■■□□ 17.2
DKC1O60832 EIF4G1-226ENST00000450424 2658 ntTSL 518.71■□□□□ 0.593e-6■■■□□ 17.2
DKC1O60832 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.591e-9■■■□□ 17.2
DKC1O60832 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.491e-9■■■□□ 17.2
DKC1O60832 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.04■□□□□ 0.483e-6■■■□□ 17.2
DKC1O60832 EIF4G1-210ENST00000421110 2755 ntTSL 517.98■□□□□ 0.473e-6■■■□□ 17.2
DKC1O60832 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.81■□□□□ 0.442e-12■■■□□ 17.2
DKC1O60832 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.393e-6■■■□□ 17.2
DKC1O60832 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.388e-7■■■□□ 17.2
DKC1O60832 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.39■□□□□ 0.383e-6■■■□□ 17.2
DKC1O60832 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.37■□□□□ 0.373e-6■■■□□ 17.2
DKC1O60832 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.32■□□□□ 0.363e-6■■■□□ 17.2
DKC1O60832 NCOR2-213ENST00000448614 582 ntTSL 317.29■□□□□ 0.368e-7■■■□□ 17.2
DKC1O60832 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.09■□□□□ 0.333e-6■■■□□ 17.2
DKC1O60832 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.298e-7■■■□□ 17.2
DKC1O60832 EIF4G1-213ENST00000426123 2907 ntTSL 216.67■□□□□ 0.263e-6■■■□□ 17.2
DKC1O60832 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.62■□□□□ 0.258e-7■■■□□ 17.2
DKC1O60832 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.248e-7■■■□□ 17.2
DKC1O60832 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.21■□□□□ 0.183e-6■■■□□ 17.2
DKC1O60832 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.183e-6■■■□□ 17.2
DKC1O60832 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.9■□□□□ 0.148e-7■■■□□ 17.2
DKC1O60832 EIF4G1-222ENST00000442406 5129 ntTSL 1 (best)15.81■□□□□ 0.123e-6■■■□□ 17.2
DKC1O60832 SLC39A11-209ENST00000580557 794 ntTSL 315.74■□□□□ 0.118e-7■■■□□ 17.2
DKC1O60832 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.088e-7■■■□□ 17.2
DKC1O60832 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.028e-7■■■□□ 17.2
DKC1O60832 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.14■□□□□ 0.011e-9■■■□□ 17.2
DKC1O60832 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC15.09■□□□□ 0.013e-6■■■□□ 17.2
DKC1O60832 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.018e-7■■■□□ 17.2
DKC1O60832 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC14.78□□□□□ -0.048e-7■■■□□ 17.2
DKC1O60832 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.76□□□□□ -0.058e-7■■■□□ 17.2
DKC1O60832 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.068e-7■■■□□ 17.2
DKC1O60832 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.071e-9■■■□□ 17.2
DKC1O60832 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC14.57□□□□□ -0.083e-6■■■□□ 17.2
DKC1O60832 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.122e-12■■■□□ 17.2
DKC1O60832 SLC39A11-213ENST00000582769 567 ntTSL 514.13□□□□□ -0.158e-7■■■□□ 17.2
DKC1O60832 SLC39A11-206ENST00000579491 692 ntTSL 314.13□□□□□ -0.158e-7■■■□□ 17.2
DKC1O60832 EXOC7-205ENST00000405575 2208 ntTSL 5 BASIC13.84□□□□□ -0.198e-7■■■□□ 17.2
DKC1O60832 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.28e-7■■■□□ 17.2
DKC1O60832 ASCC2-215ENST00000472433 536 ntTSL 313.77□□□□□ -0.211e-9■■■□□ 17.2
Retrieved 100 of 8,567 protein–RNA pairs in 102.6 ms