RNA–Protein interactions for RNA: ENST00000541847.5

SOX5-213, Transcript of SRY-box 5, humanhuman

TSL 3 BASIC

Gene SOX5, Length 758 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5-213ENST00000541847 NISCHQ9Y2I1 1504 aa22.75■■□□□ 1.23
SOX5-213ENST00000541847 ABCC9O60706 1549 aa21.1■□□□□ 0.97
SOX5-213ENST00000541847 CCDC180Q9P1Z9 1646 aa20.81■□□□□ 0.92
SOX5-213ENST00000541847 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.82
SOX5-213ENST00000541847 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
SOX5-213ENST00000541847 UNC13AQ9UPW8 1703 aa19.73■□□□□ 0.75
SOX5-213ENST00000541847 NACADO15069 1562 aa19.69■□□□□ 0.74
SOX5-213ENST00000541847 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
SOX5-213ENST00000541847 BICRAQ9NZM4 1560 aa19.41■□□□□ 0.7
SOX5-213ENST00000541847 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
SOX5-213ENST00000541847 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
SOX5-213ENST00000541847 CC2D2AQ9P2K1 1620 aa19.14■□□□□ 0.66
SOX5-213ENST00000541847 SHROOM4Q9ULL8 1493 aa19.08■□□□□ 0.64
SOX5-213ENST00000541847 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
SOX5-213ENST00000541847 EIF4G1Q04637 1599 aaKnown RBP18.95■□□□□ 0.62
SOX5-213ENST00000541847 DNAJC5Q9H3Z4 198 aa18.95■□□□□ 0.62
SOX5-213ENST00000541847 SCRIBQ14160 1630 aa18.81■□□□□ 0.6
SOX5-213ENST00000541847 DCAF1Q9Y4B6 1507 aa18.8■□□□□ 0.6
SOX5-213ENST00000541847 ZCCHC6Q5VYS8 1495 aaKnown RBP18.74■□□□□ 0.59
SOX5-213ENST00000541847 CUX2O14529 1486 aa18.46■□□□□ 0.54
SOX5-213ENST00000541847 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
SOX5-213ENST00000541847 NCAPD3P42695 1498 aa18.11■□□□□ 0.49
SOX5-213ENST00000541847 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
SOX5-213ENST00000541847 HMGXB3Q12766 1538 aa18■□□□□ 0.47
SOX5-213ENST00000541847 NESP48681 1621 aa18■□□□□ 0.47
SOX5-213ENST00000541847 ATAD2BQ9ULI0 1458 aa17.98■□□□□ 0.47
SOX5-213ENST00000541847 SMARCA2P51531 1590 aa17.96■□□□□ 0.46
SOX5-213ENST00000541847 SMARCA4P51532 1647 aa17.93■□□□□ 0.46
SOX5-213ENST00000541847 KIF21AQ7Z4S6 1674 aa17.93■□□□□ 0.46
SOX5-213ENST00000541847 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
SOX5-213ENST00000541847 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
SOX5-213ENST00000541847 BAZ1BQ9UIG0 1483 aaKnown RBP17.78■□□□□ 0.44
SOX5-213ENST00000541847 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
SOX5-213ENST00000541847 BAZ1AQ9NRL2 1556 aaPredicted RBP17.72■□□□□ 0.43
SOX5-213ENST00000541847 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
SOX5-213ENST00000541847 WDR62O43379 1518 aa17.62■□□□□ 0.41
SOX5-213ENST00000541847 MRC2Q9UBG0 1479 aa17.59■□□□□ 0.41
SOX5-213ENST00000541847 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
SOX5-213ENST00000541847 CADPSQ9ULU8 1353 aa17.49■□□□□ 0.39
SOX5-213ENST00000541847 RIMBP3CA6NJZ7 1639 aa17.43■□□□□ 0.38
SOX5-213ENST00000541847 RIMBP3BA6NNM3 1639 aa17.43■□□□□ 0.38
SOX5-213ENST00000541847 RIMBP3Q9UFD9 1639 aa17.43■□□□□ 0.38
SOX5-213ENST00000541847 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
SOX5-213ENST00000541847 OSCARQ8IYS5 282 aa17.41■□□□□ 0.38
SOX5-213ENST00000541847 WIZO95785 1651 aa17.36■□□□□ 0.37
SOX5-213ENST00000541847 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.37
SOX5-213ENST00000541847 PRDM2Q13029 1718 aa17.32■□□□□ 0.36
SOX5-213ENST00000541847 URB2Q14146 1524 aaKnown RBP17.25■□□□□ 0.35
SOX5-213ENST00000541847 ARHGEF11O15085 1522 aa17.24■□□□□ 0.35
SOX5-213ENST00000541847 CFTRP13569 1480 aa17.23■□□□□ 0.35
SOX5-213ENST00000541847 CHD1O14646 1710 aa17.15■□□□□ 0.34
SOX5-213ENST00000541847 ZNF608Q9ULD9 1512 aaPredicted RBP17.09■□□□□ 0.33
SOX5-213ENST00000541847 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
SOX5-213ENST00000541847 IFT140Q96RY7 1462 aa17.07■□□□□ 0.32
SOX5-213ENST00000541847 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
SOX5-213ENST00000541847 CYB5RLQ6IPT4 315 aa17.03■□□□□ 0.32
SOX5-213ENST00000541847 ARAP1Q96P48 1450 aa17.02■□□□□ 0.32
SOX5-213ENST00000541847 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
SOX5-213ENST00000541847 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
SOX5-213ENST00000541847 TARBP1Q13395 1621 aaKnown RBP16.94■□□□□ 0.3
SOX5-213ENST00000541847 RSF1Q96T23 1441 aaPredicted RBP16.94■□□□□ 0.3
SOX5-213ENST00000541847 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
SOX5-213ENST00000541847 DNMBPQ6XZF7 1577 aa16.91■□□□□ 0.3
SOX5-213ENST00000541847 AEBP2Q6ZN18 517 aaPredicted RBP16.9■□□□□ 0.3
SOX5-213ENST00000541847 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.29
SOX5-213ENST00000541847 CLASP1Q7Z460 1538 aa16.82■□□□□ 0.28
SOX5-213ENST00000541847 CCDC88BA6NC98 1476 aa16.81■□□□□ 0.28
SOX5-213ENST00000541847 FBLN2P98095 1184 aa16.76■□□□□ 0.27
SOX5-213ENST00000541847 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
SOX5-213ENST00000541847 SYNJ1O43426 1573 aa16.76■□□□□ 0.27
SOX5-213ENST00000541847 POLA1P09884 1462 aaPredicted RBP16.75■□□□□ 0.27
SOX5-213ENST00000541847 SNAPC4Q5SXM2 1469 aa16.69■□□□□ 0.26
SOX5-213ENST00000541847 PBRM1Q86U86 1689 aa16.67■□□□□ 0.26
SOX5-213ENST00000541847 RAD54L2Q9Y4B4 1467 aa16.67■□□□□ 0.26
SOX5-213ENST00000541847 MAGI1Q96QZ7 1491 aaPredicted RBP16.65■□□□□ 0.26
SOX5-213ENST00000541847 TDRD9Q8NDG6 1382 aaKnown RBP16.63■□□□□ 0.25
SOX5-213ENST00000541847 SOGA1O94964 1423 aa16.62■□□□□ 0.25
SOX5-213ENST00000541847 KIF13AQ9H1H9 1805 aa16.61■□□□□ 0.25
SOX5-213ENST00000541847 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
SOX5-213ENST00000541847 SYNJ2O15056 1496 aa16.59■□□□□ 0.25
SOX5-213ENST00000541847 CHMP7Q8WUX9 453 aaPredicted RBP16.58■□□□□ 0.24
SOX5-213ENST00000541847 GRIN2BQ13224 1484 aa16.57■□□□□ 0.24
SOX5-213ENST00000541847 FGD5Q6ZNL6 1462 aa16.57■□□□□ 0.24
SOX5-213ENST00000541847 CUX1P39880 1505 aa16.5■□□□□ 0.23
SOX5-213ENST00000541847 ERCC6L2Q5T890 1561 aa16.49■□□□□ 0.23
SOX5-213ENST00000541847 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
SOX5-213ENST00000541847 SHROOM2Q13796 1616 aa16.44■□□□□ 0.22
SOX5-213ENST00000541847 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
SOX5-213ENST00000541847 GRIN2AQ12879 1464 aa16.37■□□□□ 0.21
SOX5-213ENST00000541847 ABCA10Q8WWZ4 1543 aa16.36■□□□□ 0.21
SOX5-213ENST00000541847 ADAMTS12P58397 1594 aa16.36■□□□□ 0.21
SOX5-213ENST00000541847 NUP160Q12769 1436 aa16.32■□□□□ 0.2
SOX5-213ENST00000541847 TSPOAP1O95153 1857 aa16.29■□□□□ 0.2
SOX5-213ENST00000541847 DIP2BQ9P265 1576 aa16.27■□□□□ 0.2
SOX5-213ENST00000541847 KDM6BO15054 1643 aa16.27■□□□□ 0.19
SOX5-213ENST00000541847 ABCC10Q5T3U5 1492 aa16.24■□□□□ 0.19
SOX5-213ENST00000541847 ILDR1Q86SU0 546 aaPredicted RBP16.24■□□□□ 0.19
SOX5-213ENST00000541847 MAPKBP1O60336 1514 aa16.24■□□□□ 0.19
SOX5-213ENST00000541847 BIVM-ERCC5R4GMW8 1640 aa16.2■□□□□ 0.18
SOX5-213ENST00000541847 KDM4FA0A1W2PPD8 638 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms