Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 LINC01126-201ENST00000623515 1646 ntBASIC14.18□□□□□ -0.14
VPS25Q9BRG1 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 PLK5-205ENST00000642079 1969 ntBASIC14.18□□□□□ -0.14
VPS25Q9BRG1 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS25Q9BRG1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.17□□□□□ -0.14
VPS25Q9BRG1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 MIR762-201ENST00000390236 83 ntBASIC14.17□□□□□ -0.14
VPS25Q9BRG1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
VPS25Q9BRG1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VPS25Q9BRG1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
VPS25Q9BRG1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS25Q9BRG1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS25Q9BRG1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VPS25Q9BRG1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS25Q9BRG1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS25Q9BRG1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS25Q9BRG1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms