Protein–RNA interactions for Protein: Q02767

VPS28, Vacuolar protein sorting-associated protein 28, yeastyeast

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS28Q02767 IES5YER092W 378 nt0.81□□□□□ -2.28
VPS28Q02767 YGL217CYGL217C 342 nt0.81□□□□□ -2.28
VPS28Q02767 YGR265WYGR265W 411 nt0.81□□□□□ -2.28
VPS28Q02767 YIL030W-AYIL030W-A 339 nt0.81□□□□□ -2.28
VPS28Q02767 KAR3YPR141C 2190 nt0.81□□□□□ -2.28
VPS28Q02767 YJR098CYJR098C 1971 nt0.81□□□□□ -2.28
VPS28Q02767 STB6YKL072W 2301 nt0.8□□□□□ -2.28
VPS28Q02767 YDR169C-AYDR169C-A 150 nt0.8□□□□□ -2.28
VPS28Q02767 ERP4YOR016C 624 nt0.8□□□□□ -2.28
VPS28Q02767 YPL039WYPL039W 951 nt0.8□□□□□ -2.28
VPS28Q02767 FMP23YBR047W 528 nt0.8□□□□□ -2.28
VPS28Q02767 SWI4YER111C 3282 nt0.79□□□□□ -2.28
VPS28Q02767 VPS54YDR027C 2670 nt0.79□□□□□ -2.28
VPS28Q02767 VMA7YGR020C 357 nt0.79□□□□□ -2.28
VPS28Q02767 YBL068W-AYBL068W-A 237 nt0.79□□□□□ -2.28
VPS28Q02767 YOL106WYOL106W 354 nt0.79□□□□□ -2.28
VPS28Q02767 KIP1YBL063W 3336 nt0.79□□□□□ -2.28
VPS28Q02767 SLS1YLR139C 1932 nt0.79□□□□□ -2.28
VPS28Q02767 SLX4YLR135W 2247 nt0.79□□□□□ -2.28
VPS28Q02767 REF2YDR195W 1602 nt0.78□□□□□ -2.28
VPS28Q02767 TTI1YKL033W 3117 nt0.78□□□□□ -2.28
VPS28Q02767 SEC3YER008C 4011 nt0.78□□□□□ -2.28
VPS28Q02767 YBL073WYBL073W 312 nt0.78□□□□□ -2.28
VPS28Q02767 HCH1YNL281W 462 nt0.78□□□□□ -2.28
VPS28Q02767 YCL046WYCL046W 324 nt0.78□□□□□ -2.28
VPS28Q02767 RAD50YNL250W 3939 nt0.77□□□□□ -2.29
VPS28Q02767 CRG1YHR209W 876 nt0.77□□□□□ -2.29
VPS28Q02767 YMR304C-AYMR304C-A 351 nt0.77□□□□□ -2.29
VPS28Q02767 snR14snR14 160 nt0.77□□□□□ -2.29
VPS28Q02767 SAG1YJR004C 1953 nt0.77□□□□□ -2.29
VPS28Q02767 KAP120YPL125W 3099 nt0.77□□□□□ -2.29
VPS28Q02767 IFH1YLR223C 3258 nt0.76□□□□□ -2.29
VPS28Q02767 MAK10YEL053C 2202 nt0.76□□□□□ -2.29
VPS28Q02767 YER138W-AYER138W-A 105 nt0.76□□□□□ -2.29
VPS28Q02767 LIN1YHR156C 1023 nt0.76□□□□□ -2.29
VPS28Q02767 PAU18YLL064C 363 nt0.76□□□□□ -2.29
VPS28Q02767 YLR217WYLR217W 324 nt0.76□□□□□ -2.29
VPS28Q02767 DDR48YMR173W 1293 nt0.76□□□□□ -2.29
VPS28Q02767 PAU6YNR076W 363 nt0.76□□□□□ -2.29
VPS28Q02767 YBL107W-AYBL107W-A 105 nt0.76□□□□□ -2.29
VPS28Q02767 ATP20YPR020W 348 nt0.76□□□□□ -2.29
VPS28Q02767 PAU24YBR301W 363 nt0.76□□□□□ -2.29
VPS28Q02767 APL3YBL037W 3078 nt0.75□□□□□ -2.29
VPS28Q02767 YBR184WYBR184W 1572 nt0.75□□□□□ -2.29
VPS28Q02767 BUD3YCL014W 4911 nt0.75□□□□□ -2.29
VPS28Q02767 YHR054CYHR054C 1065 nt0.75□□□□□ -2.29
VPS28Q02767 CLU1YMR012W 3834 nt0.75□□□□□ -2.29
VPS28Q02767 YMR242W-AYMR242W-A 90 nt0.75□□□□□ -2.29
VPS28Q02767 SEC5YDR166C 2916 nt0.75□□□□□ -2.29
VPS28Q02767 NUT1YGL151W 3399 nt0.74□□□□□ -2.29
VPS28Q02767 YPR117WYPR117W 7470 nt0.74□□□□□ -2.29
VPS28Q02767 CHZ1YER030W 462 nt0.74□□□□□ -2.29
VPS28Q02767 YIR020CYIR020C 303 nt0.74□□□□□ -2.29
VPS28Q02767 YML003WYML003W 873 nt0.74□□□□□ -2.29
VPS28Q02767 SGO1YOR073W 1773 nt0.74□□□□□ -2.29
VPS28Q02767 IML1YJR138W 4755 nt0.74□□□□□ -2.29
VPS28Q02767 VPS52YDR484W 1926 nt0.74□□□□□ -2.29
VPS28Q02767 RSM27YGR215W 333 nt0.73□□□□□ -2.29
VPS28Q02767 YIR021W-AYIR021W-A 213 nt0.73□□□□□ -2.29
VPS28Q02767 RPL37AYLR185W 267 nt0.73□□□□□ -2.29
VPS28Q02767 YNL150WYNL150W 408 nt0.73□□□□□ -2.29
VPS28Q02767 YPR170CYPR170C 336 nt0.73□□□□□ -2.29
VPS28Q02767 UBS1YBR165W 834 nt0.73□□□□□ -2.29
VPS28Q02767 ZRG17YNR039C 1818 nt0.73□□□□□ -2.29
VPS28Q02767 YGR130CYGR130C 2451 nt0.73□□□□□ -2.29
VPS28Q02767 PAU2YEL049W 363 nt0.72□□□□□ -2.29
VPS28Q02767 CWC23YGL128C 852 nt0.72□□□□□ -2.29
VPS28Q02767 RPL42BYHR141C 321 nt0.72□□□□□ -2.29
VPS28Q02767 RPL42AYNL162W 321 nt0.72□□□□□ -2.29
VPS28Q02767 IRC23YOR044W 474 nt0.72□□□□□ -2.29
VPS28Q02767 SPT21YMR179W 2277 nt0.72□□□□□ -2.29
VPS28Q02767 YLL054CYLL054C 2532 nt0.72□□□□□ -2.29
VPS28Q02767 SAS3YBL052C 2496 nt0.71□□□□□ -2.3
VPS28Q02767 snR83snR83 306 nt0.71□□□□□ -2.3
VPS28Q02767 YFR057WYFR057W 456 nt0.71□□□□□ -2.3
VPS28Q02767 SMD3YLR147C 306 nt0.71□□□□□ -2.3
VPS28Q02767 RPL9BYNL067W 576 nt0.71□□□□□ -2.3
VPS28Q02767 RRI2YOL117W 1938 nt0.71□□□□□ -2.3
VPS28Q02767 PIP2YOR363C 2991 nt0.7□□□□□ -2.3
VPS28Q02767 YDR261W-AYDR261W-A 1317 nt0.7□□□□□ -2.3
VPS28Q02767 YEL018C-AYEL018C-A 534 nt0.7□□□□□ -2.3
VPS28Q02767 YER121WYER121W 345 nt0.7□□□□□ -2.3
VPS28Q02767 YHR028W-AYHR028W-A 321 nt0.7□□□□□ -2.3
VPS28Q02767 HDA3YPR179C 1968 nt0.7□□□□□ -2.3
VPS28Q02767 GDS1YOR355W 1569 nt0.7□□□□□ -2.3
VPS28Q02767 NUP145YGL092W 3954 nt0.7□□□□□ -2.3
VPS28Q02767 KAR1YNL188W 1302 nt0.69□□□□□ -2.3
VPS28Q02767 SMB1YER029C 591 nt0.69□□□□□ -2.3
VPS28Q02767 TAD1YGL243W 1203 nt0.69□□□□□ -2.3
VPS28Q02767 YPR147CYPR147C 915 nt0.69□□□□□ -2.3
VPS28Q02767 YDL073WYDL073W 2955 nt0.69□□□□□ -2.3
VPS28Q02767 MRPL32YCR003W 552 nt0.68□□□□□ -2.3
VPS28Q02767 YDL152WYDL152W 366 nt0.68□□□□□ -2.3
VPS28Q02767 tT(UGU)Q1tT(UGU)Q1 76 nt0.68□□□□□ -2.3
VPS28Q02767 YJR140W-AYJR140W-A 150 nt0.68□□□□□ -2.3
VPS28Q02767 SPC2YML055W 537 nt0.68□□□□□ -2.3
VPS28Q02767 YMR013C-AYMR013C-A 150 nt0.68□□□□□ -2.3
VPS28Q02767 YFL002W-BYFL002W-B 1317 nt0.67□□□□□ -2.3
VPS28Q02767 YGR161W-AYGR161W-A 1317 nt0.67□□□□□ -2.3
VPS28Q02767 YBL100W-AYBL100W-A 1317 nt0.67□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 39.4 ms