Protein–RNA interactions for Protein: P53081

NIF3, NGG1-interacting factor 3, yeastyeast

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIF3P53081 tQ(UUG)E2tQ(UUG)E2 72 nt1.32□□□□□ -2.2
NIF3P53081 YHR214W-AYHR214W-A 486 nt1.32□□□□□ -2.2
NIF3P53081 YAR068WYAR068W 486 nt1.32□□□□□ -2.2
NIF3P53081 YBR012W-AYBR012W-A 1323 nt1.32□□□□□ -2.2
NIF3P53081 YOR142W-AYOR142W-A 1323 nt1.32□□□□□ -2.2
NIF3P53081 YPR158W-AYPR158W-A 1323 nt1.32□□□□□ -2.2
NIF3P53081 YGR109W-BYGR109W-B 4644 nt1.31□□□□□ -2.2
NIF3P53081 PET127YOR017W 2403 nt1.31□□□□□ -2.2
NIF3P53081 YGR250CYGR250C 2346 nt1.31□□□□□ -2.2
NIF3P53081 YAL016C-BYAL016C-B 186 nt1.31□□□□□ -2.2
NIF3P53081 YKL068W-AYKL068W-A 237 nt1.31□□□□□ -2.2
NIF3P53081 PHR1YOR386W 1698 nt1.31□□□□□ -2.2
NIF3P53081 MSC6YOR354C 2079 nt1.31□□□□□ -2.2
NIF3P53081 BRR2YER172C 6492 nt1.3□□□□□ -2.2
NIF3P53081 YLR419WYLR419W 4308 nt1.3□□□□□ -2.2
NIF3P53081 FIG2YCR089W 4830 nt1.3□□□□□ -2.2
NIF3P53081 SMB1YER029C 591 nt1.3□□□□□ -2.2
NIF3P53081 YGL024WYGL024W 336 nt1.3□□□□□ -2.2
NIF3P53081 EMC4YGL231C 573 nt1.3□□□□□ -2.2
NIF3P53081 PKR1YMR123W 369 nt1.3□□□□□ -2.2
NIF3P53081 PET123YOR158W 957 nt1.3□□□□□ -2.2
NIF3P53081 SHE9YDR393W 1371 nt1.3□□□□□ -2.2
NIF3P53081 FYV8YGR196C 2454 nt1.3□□□□□ -2.2
NIF3P53081 SMY1YKL079W 1971 nt1.3□□□□□ -2.2
NIF3P53081 PIK1YNL267W 3201 nt1.3□□□□□ -2.2
NIF3P53081 CTR9YOL145C 3234 nt1.29□□□□□ -2.2
NIF3P53081 YLR422WYLR422W 5799 nt1.29□□□□□ -2.2
NIF3P53081 IRR1YIL026C 3453 nt1.29□□□□□ -2.2
NIF3P53081 SPC110YDR356W 2835 nt1.29□□□□□ -2.2
NIF3P53081 CIC1YHR052W 1131 nt1.29□□□□□ -2.2
NIF3P53081 STE18YJR086W 333 nt1.29□□□□□ -2.2
NIF3P53081 CGI121YML036W 546 nt1.29□□□□□ -2.2
NIF3P53081 YOR248WYOR248W 303 nt1.29□□□□□ -2.2
NIF3P53081 YPR153WYPR153W 423 nt1.29□□□□□ -2.2
NIF3P53081 ATG11YPR049C 3537 nt1.29□□□□□ -2.2
NIF3P53081 SEC21YNL287W 2808 nt1.28□□□□□ -2.2
NIF3P53081 YHR052W-AYHR052W-A 195 nt1.28□□□□□ -2.2
NIF3P53081 YHR054W-AYHR054W-A 195 nt1.28□□□□□ -2.2
NIF3P53081 ABM1YJR108W 372 nt1.28□□□□□ -2.2
NIF3P53081 COA6YMR244C-A 315 nt1.28□□□□□ -2.2
NIF3P53081 PEX8YGR077C 1770 nt1.28□□□□□ -2.2
NIF3P53081 POL5YEL055C 3069 nt1.27□□□□□ -2.21
NIF3P53081 PPN1YDR452W 2025 nt1.27□□□□□ -2.21
NIF3P53081 YIL102CYIL102C 306 nt1.27□□□□□ -2.21
NIF3P53081 YKL183C-AYKL183C-A 213 nt1.27□□□□□ -2.21
NIF3P53081 RPS18BYML026C 441 nt1.27□□□□□ -2.21
NIF3P53081 SNF5YBR289W 2718 nt1.26□□□□□ -2.21
NIF3P53081 YBR184WYBR184W 1572 nt1.26□□□□□ -2.21
NIF3P53081 QCR7YDR529C 384 nt1.26□□□□□ -2.21
NIF3P53081 YAP3YHL009C 993 nt1.26□□□□□ -2.21
NIF3P53081 CRG1YHR209W 876 nt1.26□□□□□ -2.21
NIF3P53081 YJL015CYJL015C 285 nt1.26□□□□□ -2.21
NIF3P53081 FCF2YLR051C 654 nt1.26□□□□□ -2.21
NIF3P53081 EGD1YPL037C 474 nt1.26□□□□□ -2.21
NIF3P53081 YPR039WYPR039W 336 nt1.26□□□□□ -2.21
NIF3P53081 YCL023CYCL023C 348 nt1.26□□□□□ -2.21
NIF3P53081 RLM1YPL089C 2031 nt1.26□□□□□ -2.21
NIF3P53081 NCA2YPR155C 1851 nt1.26□□□□□ -2.21
NIF3P53081 SEF1YBL066C 3447 nt1.25□□□□□ -2.21
NIF3P53081 CAT8YMR280C 4302 nt1.25□□□□□ -2.21
NIF3P53081 YDL152WYDL152W 366 nt1.25□□□□□ -2.21
NIF3P53081 RPL9AYGL147C 576 nt1.25□□□□□ -2.21
NIF3P53081 YLR140WYLR140W 327 nt1.25□□□□□ -2.21
NIF3P53081 DDR48YMR173W 1293 nt1.25□□□□□ -2.21
NIF3P53081 snR189snR189 189 nt1.25□□□□□ -2.21
NIF3P53081 YPR146CYPR146C 330 nt1.25□□□□□ -2.21
NIF3P53081 MSS11YMR164C 2277 nt1.24□□□□□ -2.21
NIF3P53081 YBR071WYBR071W 636 nt1.24□□□□□ -2.21
NIF3P53081 MAD1YGL086W 2250 nt1.24□□□□□ -2.21
NIF3P53081 MLH3YPL164C 2148 nt1.24□□□□□ -2.21
NIF3P53081 TRM3YDL112W 4311 nt1.23□□□□□ -2.21
NIF3P53081 SPC98YNL126W 2541 nt1.23□□□□□ -2.21
NIF3P53081 HKR1YDR420W 5409 nt1.23□□□□□ -2.21
NIF3P53081 YBR121C-AYBR121C-A 159 nt1.23□□□□□ -2.21
NIF3P53081 GNT1YOR320C 1476 nt1.23□□□□□ -2.21
NIF3P53081 RPL42BYHR141C 321 nt1.22□□□□□ -2.21
NIF3P53081 PFD1YJL179W 330 nt1.22□□□□□ -2.21
NIF3P53081 EAF6YJR082C 342 nt1.22□□□□□ -2.21
NIF3P53081 NOP15YNL110C 663 nt1.22□□□□□ -2.21
NIF3P53081 RPL42AYNL162W 321 nt1.22□□□□□ -2.21
NIF3P53081 MSH5YDL154W 2706 nt1.22□□□□□ -2.21
NIF3P53081 PMD1YER132C 5262 nt1.21□□□□□ -2.22
NIF3P53081 EST2YLR318W 2655 nt1.21□□□□□ -2.22
NIF3P53081 RSM22YKL155C 1887 nt1.21□□□□□ -2.22
NIF3P53081 YEL057CYEL057C 702 nt1.21□□□□□ -2.22
NIF3P53081 HUR1YGL168W 333 nt1.21□□□□□ -2.22
NIF3P53081 YGR265WYGR265W 411 nt1.21□□□□□ -2.22
NIF3P53081 APQ13YJL075C 417 nt1.21□□□□□ -2.22
NIF3P53081 TMA22YJR014W 597 nt1.21□□□□□ -2.22
NIF3P53081 GPI15YNL038W 690 nt1.21□□□□□ -2.22
NIF3P53081 YBL073WYBL073W 312 nt1.21□□□□□ -2.22
NIF3P53081 YPR099CYPR099C 357 nt1.21□□□□□ -2.22
NIF3P53081 YJR098CYJR098C 1971 nt1.21□□□□□ -2.22
NIF3P53081 DOT6YER088C 2013 nt1.2□□□□□ -2.22
NIF3P53081 KAP122YGL016W 3246 nt1.2□□□□□ -2.22
NIF3P53081 BIG1YHR101C 1008 nt1.2□□□□□ -2.22
NIF3P53081 PAU18YLL064C 363 nt1.2□□□□□ -2.22
NIF3P53081 PAU6YNR076W 363 nt1.2□□□□□ -2.22
NIF3P53081 snR13snR13 124 nt1.2□□□□□ -2.22
NIF3P53081 FMP23YBR047W 528 nt1.2□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 148.5 ms