Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 YGR265WYGR265W 411 nt2.75□□□□□ -1.97
TY4A-JP47023 PHS1YJL097W 654 nt2.75□□□□□ -1.97
TY4A-JP47023 BFA1YJR053W 1725 nt2.75□□□□□ -1.97
TY4A-JP47023 COS111YBR203W 2775 nt2.74□□□□□ -1.97
TY4A-JP47023 CRM1YGR218W 3255 nt2.74□□□□□ -1.97
TY4A-JP47023 YDR048CYDR048C 315 nt2.74□□□□□ -1.97
TY4A-JP47023 SPG3YDR504C 384 nt2.74□□□□□ -1.97
TY4A-JP47023 RPS17AYML024W 411 nt2.74□□□□□ -1.97
TY4A-JP47023 TRA1YHR099W 11235 nt2.74□□□□□ -1.97
TY4A-JP47023 PAN3YKL025C 2040 nt2.74□□□□□ -1.97
TY4A-JP47023 SIR4YDR227W 4077 nt2.74□□□□□ -1.97
TY4A-JP47023 RIM20YOR275C 1986 nt2.74□□□□□ -1.97
TY4A-JP47023 YBR184WYBR184W 1572 nt2.74□□□□□ -1.97
TY4A-JP47023 TOR1YJR066W 7413 nt2.73□□□□□ -1.97
TY4A-JP47023 YBR277CYBR277C 402 nt2.73□□□□□ -1.97
TY4A-JP47023 SRO77YBL106C 3033 nt2.73□□□□□ -1.97
TY4A-JP47023 PFF1YBR074W 2931 nt2.72□□□□□ -1.97
TY4A-JP47023 VPS35YJL154C 2835 nt2.72□□□□□ -1.97
TY4A-JP47023 HTL1YCR020W-B 237 nt2.72□□□□□ -1.97
TY4A-JP47023 CSN9YDR179C 489 nt2.72□□□□□ -1.97
TY4A-JP47023 ERP6YGL002W 651 nt2.72□□□□□ -1.97
TY4A-JP47023 YIL174WYIL174W 228 nt2.72□□□□□ -1.97
TY4A-JP47023 YJL222W-AYJL222W-A 228 nt2.72□□□□□ -1.97
TY4A-JP47023 YLR154W-EYLR154W-E 204 nt2.72□□□□□ -1.97
TY4A-JP47023 YML037CYML037C 1023 nt2.72□□□□□ -1.97
TY4A-JP47023 YDR098C-BYDR098C-B 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YDR210C-DYDR210C-D 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YDR316W-BYDR316W-B 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YDR365W-BYDR365W-B 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YER138CYER138C 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YER160CYER160C 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YGR038C-BYGR038C-B 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YGR161C-DYGR161C-D 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YJR027WYJR027W 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YLR157C-BYLR157C-B 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YML039WYML039W 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YML045WYML045W 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YMR050CYMR050C 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YOL103W-BYOL103W-B 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YBR012W-BYBR012W-B 5271 nt2.71□□□□□ -1.97
TY4A-JP47023 YOR142W-BYOR142W-B 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YPL257W-BYPL257W-B 5268 nt2.71□□□□□ -1.97
TY4A-JP47023 YPR158W-BYPR158W-B 5271 nt2.71□□□□□ -1.97
TY4A-JP47023 POL3YDL102W 3294 nt2.71□□□□□ -1.98
TY4A-JP47023 YDR344CYDR344C 444 nt2.71□□□□□ -1.98
TY4A-JP47023 HOP2YGL033W 657 nt2.71□□□□□ -1.98
TY4A-JP47023 YPL152W-AYPL152W-A 99 nt2.71□□□□□ -1.98
TY4A-JP47023 MNL2YLR057W 2550 nt2.71□□□□□ -1.98
TY4A-JP47023 PEX8YGR077C 1770 nt2.71□□□□□ -1.98
TY4A-JP47023 OSH6YKR003W 1347 nt2.7□□□□□ -1.98
TY4A-JP47023 YDL211CYDL211C 1119 nt2.7□□□□□ -1.98
TY4A-JP47023 SMD1YGR074W 441 nt2.7□□□□□ -1.98
TY4A-JP47023 YHL041WYHL041W 450 nt2.7□□□□□ -1.98
TY4A-JP47023 NOP10YHR072W-A 177 nt2.7□□□□□ -1.98
TY4A-JP47023 MF(ALPHA)1YPL187W 498 nt2.7□□□□□ -1.98
TY4A-JP47023 SAR1YPL218W 573 nt2.7□□□□□ -1.98
TY4A-JP47023 LYS9YNR050C 1341 nt2.69□□□□□ -1.98
TY4A-JP47023 RPS22AYJL190C 393 nt2.69□□□□□ -1.98
TY4A-JP47023 EFR3YMR212C 2349 nt2.69□□□□□ -1.98
TY4A-JP47023 MDM1YML104C 3384 nt2.69□□□□□ -1.98
TY4A-JP47023 PEP3YLR148W 2757 nt2.68□□□□□ -1.98
TY4A-JP47023 SCP160YJL080C 3669 nt2.68□□□□□ -1.98
TY4A-JP47023 CYC7YEL039C 342 nt2.68□□□□□ -1.98
TY4A-JP47023 tM(CAU)Q1tM(CAU)Q1 76 nt2.68□□□□□ -1.98
TY4A-JP47023 YLR053CYLR053C 327 nt2.68□□□□□ -1.98
TY4A-JP47023 YMR194C-AYMR194C-A 225 nt2.68□□□□□ -1.98
TY4A-JP47023 GUP1YGL084C 1683 nt2.68□□□□□ -1.98
TY4A-JP47023 DBP6YNR038W 1890 nt2.68□□□□□ -1.98
TY4A-JP47023 SEF1YBL066C 3447 nt2.68□□□□□ -1.98
TY4A-JP47023 IST2YBR086C 2841 nt2.68□□□□□ -1.98
TY4A-JP47023 YGL069CYGL069C 465 nt2.67□□□□□ -1.98
TY4A-JP47023 YGL188C-AYGL188C-A 141 nt2.67□□□□□ -1.98
TY4A-JP47023 YGR069WYGR069W 336 nt2.67□□□□□ -1.98
TY4A-JP47023 tW(CCA)G1tW(CCA)G1 72 nt2.67□□□□□ -1.98
TY4A-JP47023 tW(CCA)G2tW(CCA)G2 72 nt2.67□□□□□ -1.98
TY4A-JP47023 tW(CCA)JtW(CCA)J 72 nt2.67□□□□□ -1.98
TY4A-JP47023 tW(CCA)KtW(CCA)K 72 nt2.67□□□□□ -1.98
TY4A-JP47023 tW(CCA)MtW(CCA)M 72 nt2.67□□□□□ -1.98
TY4A-JP47023 tW(CCA)PtW(CCA)P 72 nt2.67□□□□□ -1.98
TY4A-JP47023 PCC1YKR095W-A 267 nt2.67□□□□□ -1.98
TY4A-JP47023 HHT1YBR010W 411 nt2.67□□□□□ -1.98
TY4A-JP47023 YOP1YPR028W 543 nt2.67□□□□□ -1.98
TY4A-JP47023 YBR224WYBR224W 516 nt2.67□□□□□ -1.98
TY4A-JP47023 SCH9YHR205W 2475 nt2.67□□□□□ -1.98
TY4A-JP47023 HDA3YPR179C 1968 nt2.67□□□□□ -1.98
TY4A-JP47023 YIL082W-AYIL082W-A 4497 nt2.66□□□□□ -1.98
TY4A-JP47023 KEL2YGR238C 2649 nt2.66□□□□□ -1.98
TY4A-JP47023 YHL042WYHL042W 453 nt2.66□□□□□ -1.98
TY4A-JP47023 SNC1YAL030W 354 nt2.66□□□□□ -1.98
TY4A-JP47023 YAL059C-AYAL059C-A 423 nt2.66□□□□□ -1.98
TY4A-JP47023 TMN3YER113C 2121 nt2.66□□□□□ -1.98
TY4A-JP47023 RAV1YJR033C 4074 nt2.65□□□□□ -1.98
TY4A-JP47023 UBR1YGR184C 5853 nt2.65□□□□□ -1.98
TY4A-JP47023 CDC27YBL084C 2277 nt2.65□□□□□ -1.99
TY4A-JP47023 YHR180W-AYHR180W-A 183 nt2.65□□□□□ -1.99
TY4A-JP47023 YIL102CYIL102C 306 nt2.65□□□□□ -1.99
TY4A-JP47023 YKL165C-AYKL165C-A 234 nt2.65□□□□□ -1.99
TY4A-JP47023 RPL36BYPL249C-A 303 nt2.65□□□□□ -1.99
TY4A-JP47023 CLN3YAL040C 1743 nt2.65□□□□□ -1.99
TY4A-JP47023 YLR149CYLR149C 2193 nt2.64□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 59.9 ms