Protein–RNA interactions for Protein: P39538

UBP12, Ubiquitin carboxyl-terminal hydrolase 12, yeastyeast

Predictions only

Length 1,254 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP12P39538 YLR149CYLR149C 2193 nt2.66□□□□□ -1.98
UBP12P39538 MGM1YOR211C 2646 nt2.65□□□□□ -1.98
UBP12P39538 RPL9BYNL067W 576 nt2.65□□□□□ -1.99
UBP12P39538 VMA9YCL005W-A 222 nt2.65□□□□□ -1.99
UBP12P39538 YBR184WYBR184W 1572 nt2.65□□□□□ -1.99
UBP12P39538 ALK2YBL009W 2031 nt2.64□□□□□ -1.99
UBP12P39538 YGL239CYGL239C 315 nt2.64□□□□□ -1.99
UBP12P39538 YAL063C-AYAL063C-A 291 nt2.64□□□□□ -1.99
UBP12P39538 TRL1YJL087C 2484 nt2.64□□□□□ -1.99
UBP12P39538 RAV1YJR033C 4074 nt2.63□□□□□ -1.99
UBP12P39538 GUP1YGL084C 1683 nt2.63□□□□□ -1.99
UBP12P39538 PEP3YLR148W 2757 nt2.63□□□□□ -1.99
UBP12P39538 YOR121CYOR121C 306 nt2.63□□□□□ -1.99
UBP12P39538 YBR224WYBR224W 516 nt2.63□□□□□ -1.99
UBP12P39538 YCL023CYCL023C 348 nt2.63□□□□□ -1.99
UBP12P39538 GRR1YJR090C 3456 nt2.63□□□□□ -1.99
UBP12P39538 CDC60YPL160W 3273 nt2.62□□□□□ -1.99
UBP12P39538 ATG31YDR022C 591 nt2.62□□□□□ -1.99
UBP12P39538 YHR028W-AYHR028W-A 321 nt2.62□□□□□ -1.99
UBP12P39538 YAL059C-AYAL059C-A 423 nt2.62□□□□□ -1.99
UBP12P39538 YPR099CYPR099C 357 nt2.62□□□□□ -1.99
UBP12P39538 SET2YJL168C 2202 nt2.62□□□□□ -1.99
UBP12P39538 YPR097WYPR097W 3222 nt2.62□□□□□ -1.99
UBP12P39538 MLH1YMR167W 2310 nt2.62□□□□□ -1.99
UBP12P39538 GIP3YPL137C 3831 nt2.61□□□□□ -1.99
UBP12P39538 BNR1YIL159W 4128 nt2.61□□□□□ -1.99
UBP12P39538 YER137W-AYER137W-A 306 nt2.61□□□□□ -1.99
UBP12P39538 RTT101YJL047C 2529 nt2.6□□□□□ -1.99
UBP12P39538 YDL011CYDL011C 324 nt2.6□□□□□ -1.99
UBP12P39538 RPS27AYKL156W 249 nt2.6□□□□□ -1.99
UBP12P39538 STB4YMR019W 2850 nt2.59□□□□□ -1.99
UBP12P39538 TOF2YKR010C 2316 nt2.59□□□□□ -1.99
UBP12P39538 ZRG8YER033C 3231 nt2.59□□□□□ -1.99
UBP12P39538 YDR524W-CYDR524W-C 90 nt2.59□□□□□ -1.99
UBP12P39538 DAD3YBR233W-A 285 nt2.59□□□□□ -1.99
UBP12P39538 LYS9YNR050C 1341 nt2.59□□□□□ -2
UBP12P39538 UFD4YKL010C 4452 nt2.59□□□□□ -2
UBP12P39538 SLM1YIL105C 2061 nt2.59□□□□□ -2
UBP12P39538 RUD3YOR216C 1455 nt2.58□□□□□ -2
UBP12P39538 VMR1YHL035C 4779 nt2.58□□□□□ -2
UBP12P39538 RBK1YCR036W 1002 nt2.58□□□□□ -2
UBP12P39538 HOP2YGL033W 657 nt2.58□□□□□ -2
UBP12P39538 YIL066W-AYIL066W-A 444 nt2.58□□□□□ -2
UBP12P39538 PGA1YNL158W 597 nt2.58□□□□□ -2
UBP12P39538 YOL159C-AYOL159C-A 273 nt2.58□□□□□ -2
UBP12P39538 RTT107YHR154W 3213 nt2.58□□□□□ -2
UBP12P39538 SEF1YBL066C 3447 nt2.58□□□□□ -2
UBP12P39538 DIS3YOL021C 3006 nt2.58□□□□□ -2
UBP12P39538 YFR016CYFR016C 3702 nt2.57□□□□□ -2
UBP12P39538 IST2YBR086C 2841 nt2.57□□□□□ -2
UBP12P39538 YCR102W-AYCR102W-A 198 nt2.57□□□□□ -2
UBP12P39538 YDL152WYDL152W 366 nt2.57□□□□□ -2
UBP12P39538 EMP24YGL200C 612 nt2.57□□□□□ -2
UBP12P39538 YGR035CYGR035C 351 nt2.57□□□□□ -2
UBP12P39538 PEX4YGR133W 552 nt2.57□□□□□ -2
UBP12P39538 YJL052C-AYJL052C-A 120 nt2.57□□□□□ -2
UBP12P39538 SPF1YEL031W 3648 nt2.57□□□□□ -2
UBP12P39538 DNF1YER166W 4716 nt2.57□□□□□ -2
UBP12P39538 YJR098CYJR098C 1971 nt2.56□□□□□ -2
UBP12P39538 PAN3YKL025C 2040 nt2.56□□□□□ -2
UBP12P39538 TIM13YGR181W 318 nt2.56□□□□□ -2
UBP12P39538 HSK3YKL138C-A 210 nt2.56□□□□□ -2
UBP12P39538 YBL083CYBL083C 426 nt2.56□□□□□ -2
UBP12P39538 SSD1YDR293C 3753 nt2.56□□□□□ -2
UBP12P39538 VPS8YAL002W 3825 nt2.56□□□□□ -2
UBP12P39538 YPR197CYPR197C 564 nt2.55□□□□□ -2
UBP12P39538 PET309YLR067C 2898 nt2.55□□□□□ -2
UBP12P39538 PCF11YDR228C 1881 nt2.54□□□□□ -2
UBP12P39538 AIM9YER080W 1884 nt2.54□□□□□ -2
UBP12P39538 YJR003CYJR003C 1560 nt2.54□□□□□ -2
UBP12P39538 CSF1YLR087C 8877 nt2.54□□□□□ -2
UBP12P39538 YLR053CYLR053C 327 nt2.54□□□□□ -2
UBP12P39538 YOR394C-AYOR394C-A 168 nt2.54□□□□□ -2
UBP12P39538 YDR341CYDR341C 1824 nt2.54□□□□□ -2
UBP12P39538 YOL098CYOL098C 3114 nt2.53□□□□□ -2
UBP12P39538 YDL062WYDL062W 426 nt2.53□□□□□ -2
UBP12P39538 DAD4YDR320C-A 219 nt2.53□□□□□ -2
UBP12P39538 YGR174W-AYGR174W-A 87 nt2.53□□□□□ -2
UBP12P39538 YKL183C-AYKL183C-A 213 nt2.53□□□□□ -2
UBP12P39538 YKR075W-AYKR075W-A 270 nt2.53□□□□□ -2
UBP12P39538 RPH1YER169W 2391 nt2.53□□□□□ -2
UBP12P39538 NAM7YMR080C 2916 nt2.53□□□□□ -2
UBP12P39538 SAP185YJL098W 3177 nt2.53□□□□□ -2.01
UBP12P39538 YJL020W-AYJL020W-A 258 nt2.52□□□□□ -2.01
UBP12P39538 MF(ALPHA)1YPL187W 498 nt2.52□□□□□ -2.01
UBP12P39538 SEC16YPL085W 6588 nt2.52□□□□□ -2.01
UBP12P39538 DFG16YOR030W 1860 nt2.52□□□□□ -2.01
UBP12P39538 SYH1YPL105C 2550 nt2.51□□□□□ -2.01
UBP12P39538 YKL083WYKL083W 615 nt2.51□□□□□ -2.01
UBP12P39538 YPL229WYPL229W 621 nt2.51□□□□□ -2.01
UBP12P39538 GYP5YPL249C 2685 nt2.5□□□□□ -2.01
UBP12P39538 YCR043CYCR043C 384 nt2.5□□□□□ -2.01
UBP12P39538 YAP6YDR259C 1152 nt2.5□□□□□ -2.01
UBP12P39538 WIP1YDR374W-A 270 nt2.5□□□□□ -2.01
UBP12P39538 YML003WYML003W 873 nt2.5□□□□□ -2.01
UBP12P39538 YNL058CYNL058C 951 nt2.5□□□□□ -2.01
UBP12P39538 RPL37BYDR500C 267 nt2.49□□□□□ -2.01
UBP12P39538 CYB5YNL111C 363 nt2.49□□□□□ -2.01
UBP12P39538 TFC8YPL007C 1767 nt2.49□□□□□ -2.01
UBP12P39538 BRE1YDL074C 2103 nt2.48□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 7.9 ms