Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 YDR220CYDR220C 294 nt1.47□□□□□ -2.17
MRPL40P36534 STF2YGR008C 255 nt1.47□□□□□ -2.17
MRPL40P36534 SLX9YGR081C 633 nt1.47□□□□□ -2.17
MRPL40P36534 YIR020CYIR020C 303 nt1.47□□□□□ -2.17
MRPL40P36534 YKL111CYKL111C 336 nt1.47□□□□□ -2.17
MRPL40P36534 IRC19YLL033W 693 nt1.47□□□□□ -2.17
MRPL40P36534 YER175W-AYER175W-A 165 nt1.46□□□□□ -2.18
MRPL40P36534 SPO13YHR014W 876 nt1.46□□□□□ -2.18
MRPL40P36534 PRP21YJL203W 843 nt1.46□□□□□ -2.18
MRPL40P36534 ABM1YJR108W 372 nt1.46□□□□□ -2.18
MRPL40P36534 HUG1YML058W-A 207 nt1.46□□□□□ -2.18
MRPL40P36534 FMP23YBR047W 528 nt1.46□□□□□ -2.18
MRPL40P36534 YBR184WYBR184W 1572 nt1.46□□□□□ -2.18
MRPL40P36534 PIK1YNL267W 3201 nt1.45□□□□□ -2.18
MRPL40P36534 ALK1YGL021W 2283 nt1.45□□□□□ -2.18
MRPL40P36534 SPC1YJR010C-A 285 nt1.45□□□□□ -2.18
MRPL40P36534 YLR252WYLR252W 306 nt1.45□□□□□ -2.18
MRPL40P36534 PKR1YMR123W 369 nt1.45□□□□□ -2.18
MRPL40P36534 CRG1YHR209W 876 nt1.44□□□□□ -2.18
MRPL40P36534 YJL022WYJL022W 309 nt1.44□□□□□ -2.18
MRPL40P36534 NBP1YLR457C 960 nt1.44□□□□□ -2.18
MRPL40P36534 PBY1YBR094W 2262 nt1.43□□□□□ -2.18
MRPL40P36534 SEC21YNL287W 2808 nt1.43□□□□□ -2.18
MRPL40P36534 snR79snR79 84 nt1.43□□□□□ -2.18
MRPL40P36534 SMB1YER029C 591 nt1.43□□□□□ -2.18
MRPL40P36534 YJL015CYJL015C 285 nt1.43□□□□□ -2.18
MRPL40P36534 VPS55YJR044C 423 nt1.43□□□□□ -2.18
MRPL40P36534 YBL073WYBL073W 312 nt1.43□□□□□ -2.18
MRPL40P36534 MSN5YDR335W 3675 nt1.43□□□□□ -2.18
MRPL40P36534 SPC98YNL126W 2541 nt1.42□□□□□ -2.18
MRPL40P36534 EST2YLR318W 2655 nt1.42□□□□□ -2.18
MRPL40P36534 YFR009W-AYFR009W-A 258 nt1.42□□□□□ -2.18
MRPL40P36534 VMA21YGR105W 234 nt1.42□□□□□ -2.18
MRPL40P36534 COF1YLL050C 432 nt1.42□□□□□ -2.18
MRPL40P36534 AFB1YLR040C 675 nt1.42□□□□□ -2.18
MRPL40P36534 COX7YMR256C 183 nt1.42□□□□□ -2.18
MRPL40P36534 HHT1YBR010W 411 nt1.42□□□□□ -2.18
MRPL40P36534 IRR1YIL026C 3453 nt1.42□□□□□ -2.18
MRPL40P36534 OSH6YKR003W 1347 nt1.41□□□□□ -2.18
MRPL40P36534 CDC24YAL041W 2565 nt1.41□□□□□ -2.18
MRPL40P36534 RPC10YHR143W-A 213 nt1.41□□□□□ -2.18
MRPL40P36534 YOR152CYOR152C 771 nt1.41□□□□□ -2.18
MRPL40P36534 MLH3YPL164C 2148 nt1.41□□□□□ -2.18
MRPL40P36534 MAK10YEL053C 2202 nt1.4□□□□□ -2.18
MRPL40P36534 SEF1YBL066C 3447 nt1.4□□□□□ -2.18
MRPL40P36534 GPM2YDL021W 936 nt1.4□□□□□ -2.19
MRPL40P36534 CDC36YDL165W 576 nt1.4□□□□□ -2.19
MRPL40P36534 YER121WYER121W 345 nt1.4□□□□□ -2.19
MRPL40P36534 YGR265WYGR265W 411 nt1.4□□□□□ -2.19
MRPL40P36534 YKL023C-AYKL023C-A 228 nt1.4□□□□□ -2.19
MRPL40P36534 YML003WYML003W 873 nt1.4□□□□□ -2.19
MRPL40P36534 COG4YPR105C 2586 nt1.4□□□□□ -2.19
MRPL40P36534 EMC5YIL027C 426 nt1.39□□□□□ -2.19
MRPL40P36534 YNL319WYNL319W 441 nt1.39□□□□□ -2.19
MRPL40P36534 MSH5YDL154W 2706 nt1.39□□□□□ -2.19
MRPL40P36534 PHR1YOR386W 1698 nt1.39□□□□□ -2.19
MRPL40P36534 YCS4YLR272C 3531 nt1.38□□□□□ -2.19
MRPL40P36534 tH(GUG)E1tH(GUG)E1 72 nt1.38□□□□□ -2.19
MRPL40P36534 tH(GUG)E2tH(GUG)E2 72 nt1.38□□□□□ -2.19
MRPL40P36534 tH(GUG)G1tH(GUG)G1 72 nt1.38□□□□□ -2.19
MRPL40P36534 tH(GUG)G2tH(GUG)G2 72 nt1.38□□□□□ -2.19
MRPL40P36534 tH(GUG)HtH(GUG)H 72 nt1.38□□□□□ -2.19
MRPL40P36534 tH(GUG)KtH(GUG)K 72 nt1.38□□□□□ -2.19
MRPL40P36534 tH(GUG)MtH(GUG)M 72 nt1.38□□□□□ -2.19
MRPL40P36534 tQ(UUG)E2tQ(UUG)E2 72 nt1.38□□□□□ -2.19
MRPL40P36534 CIC1YHR052W 1131 nt1.38□□□□□ -2.19
MRPL40P36534 SWS2YNL081C 432 nt1.38□□□□□ -2.19
MRPL40P36534 TTI1YKL033W 3117 nt1.38□□□□□ -2.19
MRPL40P36534 DGR2YKL121W 2559 nt1.37□□□□□ -2.19
MRPL40P36534 RVS161YCR009C 798 nt1.37□□□□□ -2.19
MRPL40P36534 RTT102YGR275W 474 nt1.37□□□□□ -2.19
MRPL40P36534 RPL42BYHR141C 321 nt1.37□□□□□ -2.19
MRPL40P36534 YIL029CYIL029C 429 nt1.37□□□□□ -2.19
MRPL40P36534 RPL42AYNL162W 321 nt1.37□□□□□ -2.19
MRPL40P36534 YBR012W-AYBR012W-A 1323 nt1.37□□□□□ -2.19
MRPL40P36534 YOR142W-AYOR142W-A 1323 nt1.37□□□□□ -2.19
MRPL40P36534 YPR158W-AYPR158W-A 1323 nt1.37□□□□□ -2.19
MRPL40P36534 MVP1YMR004W 1536 nt1.36□□□□□ -2.19
MRPL40P36534 MTC7YEL033W 420 nt1.36□□□□□ -2.19
MRPL40P36534 YER188C-AYER188C-A 300 nt1.36□□□□□ -2.19
MRPL40P36534 SLM6YBR266C 453 nt1.36□□□□□ -2.19
MRPL40P36534 YAR009CYAR009C 3591 nt1.36□□□□□ -2.19
MRPL40P36534 MSS11YMR164C 2277 nt1.36□□□□□ -2.19
MRPL40P36534 SPO75YLL005C 2607 nt1.36□□□□□ -2.19
MRPL40P36534 HNT1YDL125C 477 nt1.35□□□□□ -2.19
MRPL40P36534 CLU1YMR012W 3834 nt1.35□□□□□ -2.19
MRPL40P36534 RSM22YKL155C 1887 nt1.35□□□□□ -2.19
MRPL40P36534 UBP3YER151C 2739 nt1.34□□□□□ -2.19
MRPL40P36534 AZF1YOR113W 2745 nt1.34□□□□□ -2.19
MRPL40P36534 TRM732YMR259C 4263 nt1.34□□□□□ -2.19
MRPL40P36534 YLR419WYLR419W 4308 nt1.34□□□□□ -2.19
MRPL40P36534 CDC25YLR310C 4770 nt1.34□□□□□ -2.19
MRPL40P36534 RRT15YLR162W-A 189 nt1.34□□□□□ -2.19
MRPL40P36534 YOR376WYOR376W 369 nt1.34□□□□□ -2.19
MRPL40P36534 UFD2YDL190C 2886 nt1.34□□□□□ -2.2
MRPL40P36534 YHR214C-CYHR214C-C 1437 nt1.33□□□□□ -2.2
MRPL40P36534 YDL152WYDL152W 366 nt1.33□□□□□ -2.2
MRPL40P36534 YJR079WYJR079W 330 nt1.33□□□□□ -2.2
MRPL40P36534 RCN1YKL159C 636 nt1.33□□□□□ -2.2
MRPL40P36534 RPS18BYML026C 441 nt1.33□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 109.7 ms