Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 PTC5YOR090C 1719 nt3.1□□□□□ -1.91
PUF4P25339 DUG2YBR281C 2637 nt3.09□□□□□ -1.91
PUF4P25339 CRS5YOR031W 210 nt3.09□□□□□ -1.91
PUF4P25339 ATG13YPR185W 2217 nt3.09□□□□□ -1.91
PUF4P25339 PMR1YGL167C 2853 nt3.09□□□□□ -1.92
PUF4P25339 MPH1YIR002C 2982 nt3.09□□□□□ -1.92 RIP-Chip
PUF4P25339 NCL1YBL024W 2055 nt3.08□□□□□ -1.92 RIP-Chip
PUF4P25339 snR60snR60 104 nt3.08□□□□□ -1.92
PUF4P25339 YDL025W-AYDL025W-A 105 nt3.08□□□□□ -1.92
PUF4P25339 NPC2YDL046W 522 nt3.08□□□□□ -1.92
PUF4P25339 RPL38YLR325C 237 nt3.08□□□□□ -1.92
PUF4P25339 YBL083CYBL083C 426 nt3.08□□□□□ -1.92
PUF4P25339 YPR203WYPR203W 309 nt3.08□□□□□ -1.92
PUF4P25339 SGD1YLR336C 2700 nt3.08□□□□□ -1.92
PUF4P25339 DOT6YER088C 2013 nt3.07□□□□□ -1.92
PUF4P25339 YEL014CYEL014C 306 nt3.07□□□□□ -1.92
PUF4P25339 YGL069CYGL069C 465 nt3.07□□□□□ -1.92
PUF4P25339 YLR154W-EYLR154W-E 204 nt3.07□□□□□ -1.92
PUF4P25339 GRX8YLR364W 330 nt3.07□□□□□ -1.92
PUF4P25339 COX14YML129C 213 nt3.07□□□□□ -1.92
PUF4P25339 LSM7YNL147W 348 nt3.07□□□□□ -1.92 RIP-Chip
PUF4P25339 YOR015WYOR015W 360 nt3.07□□□□□ -1.92
PUF4P25339 MMS22YLR320W 4365 nt3.07□□□□□ -1.92
PUF4P25339 DFG16YOR030W 1860 nt3.07□□□□□ -1.92
PUF4P25339 POL2YNL262W 6669 nt3.07□□□□□ -1.92
PUF4P25339 YSP2YDR326C 4317 nt3.06□□□□□ -1.92
PUF4P25339 YDR186CYDR186C 2634 nt3.06□□□□□ -1.92
PUF4P25339 VPS55YJR044C 423 nt3.06□□□□□ -1.92
PUF4P25339 COF1YLL050C 432 nt3.06□□□□□ -1.92
PUF4P25339 RTC6YPL183W-A 282 nt3.06□□□□□ -1.92
PUF4P25339 RIF1YBR275C 5751 nt3.05□□□□□ -1.92
PUF4P25339 SNU114YKL173W 3027 nt3.05□□□□□ -1.92 RIP-Chip
PUF4P25339 YMR321CYMR321C 318 nt3.05□□□□□ -1.92
PUF4P25339 SRB8YCR081W 4284 nt3.05□□□□□ -1.92
PUF4P25339 AI5_ALPHAQ0070 1893 nt3.05□□□□□ -1.92
PUF4P25339 UBP11YKR098C 2154 nt3.04□□□□□ -1.92
PUF4P25339 FMP16YDR070C 282 nt3.04□□□□□ -1.92
PUF4P25339 YHL005CYHL005C 393 nt3.04□□□□□ -1.92
PUF4P25339 YLR120W-AYLR120W-A 102 nt3.04□□□□□ -1.92
PUF4P25339 UPS1YLR193C 528 nt3.04□□□□□ -1.92
PUF4P25339 TFC4YGR047C 3078 nt3.04□□□□□ -1.92
PUF4P25339 PRP6YBR055C 2700 nt3.04□□□□□ -1.92
PUF4P25339 TOF2YKR010C 2316 nt3.03□□□□□ -1.92
PUF4P25339 OLI1Q0130 231 nt3.03□□□□□ -1.92
PUF4P25339 VMA9YCL005W-A 222 nt3.03□□□□□ -1.92
PUF4P25339 ALK2YBL009W 2031 nt3.02□□□□□ -1.93
PUF4P25339 YGR250CYGR250C 2346 nt3.02□□□□□ -1.93
PUF4P25339 YIL169CYIL169C 2988 nt3.02□□□□□ -1.93
PUF4P25339 MRP10YDL045W-A 288 nt3.02□□□□□ -1.93
PUF4P25339 KAP123YER110C 3342 nt3.02□□□□□ -1.93 RIP-Chip
PUF4P25339 ILS1YBL076C 3219 nt3.02□□□□□ -1.93
PUF4P25339 SSN2YDR443C 4263 nt3.02□□□□□ -1.93
PUF4P25339 SPO14YKR031C 5052 nt3.01□□□□□ -1.93
PUF4P25339 PHO2YDL106C 1680 nt3.01□□□□□ -1.93
PUF4P25339 YHR086W-AYHR086W-A 162 nt3.01□□□□□ -1.93
PUF4P25339 PCC1YKR095W-A 267 nt3.01□□□□□ -1.93
PUF4P25339 FPR1YNL135C 345 nt3.01□□□□□ -1.93
PUF4P25339 VPS35YJL154C 2835 nt3.01□□□□□ -1.93
PUF4P25339 RTT10YPL183C 3042 nt3.01□□□□□ -1.93
PUF4P25339 HDA3YPR179C 1968 nt3□□□□□ -1.93
PUF4P25339 YLR255CYLR255C 354 nt3□□□□□ -1.93
PUF4P25339 SGS1YMR190C 4344 nt3□□□□□ -1.93
PUF4P25339 RGC1YPR115W 3252 nt3□□□□□ -1.93
PUF4P25339 PAN3YKL025C 2040 nt3□□□□□ -1.93
PUF4P25339 SNF5YBR289W 2718 nt2.99□□□□□ -1.93
PUF4P25339 FIR1YER032W 2631 nt2.99□□□□□ -1.93
PUF4P25339 YNL028WYNL028W 318 nt2.99□□□□□ -1.93
PUF4P25339 YNL097C-BYNL097C-B 123 nt2.99□□□□□ -1.93
PUF4P25339 SNC2YOR327C 348 nt2.99□□□□□ -1.93 RIP-Chip
PUF4P25339 NUT2YPR168W 474 nt2.99□□□□□ -1.93
PUF4P25339 CAF120YNL278W 3183 nt2.99□□□□□ -1.93
PUF4P25339 GUP1YGL084C 1683 nt2.98□□□□□ -1.93
PUF4P25339 YLR278CYLR278C 4026 nt2.98□□□□□ -1.93
PUF4P25339 YME2YMR302C 2553 nt2.98□□□□□ -1.93
PUF4P25339 YML007C-AYML007C-A 111 nt2.98□□□□□ -1.93
PUF4P25339 YML037CYML037C 1023 nt2.98□□□□□ -1.93
PUF4P25339 CSE2YNR010W 450 nt2.98□□□□□ -1.93
PUF4P25339 RGA2YDR379W 3030 nt2.98□□□□□ -1.93
PUF4P25339 HRD3YLR207W 2502 nt2.98□□□□□ -1.93
PUF4P25339 RPL6AYML073C 531 nt2.97□□□□□ -1.93
PUF4P25339 INP52YNL106C 3552 nt2.96□□□□□ -1.94
PUF4P25339 YDR209CYDR209C 414 nt2.96□□□□□ -1.94
PUF4P25339 YDR426CYDR426C 378 nt2.96□□□□□ -1.94
PUF4P25339 YDR524C-AYDR524C-A 120 nt2.96□□□□□ -1.94
PUF4P25339 SMD1YGR074W 441 nt2.96□□□□□ -1.94
PUF4P25339 RPL20AYMR242C 519 nt2.96□□□□□ -1.94
PUF4P25339 YBR224WYBR224W 516 nt2.96□□□□□ -1.94
PUF4P25339 TMN3YER113C 2121 nt2.96□□□□□ -1.94
PUF4P25339 RRP12YPL012W 3687 nt2.96□□□□□ -1.94 RIP-Chip
PUF4P25339 YGR067CYGR067C 2415 nt2.95□□□□□ -1.94
PUF4P25339 FLO11YIR019C 4104 nt2.95□□□□□ -1.94
PUF4P25339 LCD1YDR499W 2244 nt2.95□□□□□ -1.94
PUF4P25339 snR70snR70 164 nt2.95□□□□□ -1.94
PUF4P25339 RPS22AYJL190C 393 nt2.95□□□□□ -1.94
PUF4P25339 RRT15YLR162W-A 189 nt2.95□□□□□ -1.94
PUF4P25339 SNQ2YDR011W 4506 nt2.95□□□□□ -1.94
PUF4P25339 SMY1YKL079W 1971 nt2.94□□□□□ -1.94
PUF4P25339 SDC25YLL016W 3147 nt2.94□□□□□ -1.94
PUF4P25339 VTC1YER072W 390 nt2.94□□□□□ -1.94
PUF4P25339 YGL217CYGL217C 342 nt2.94□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 116.8 ms