Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.75■□□□□ 0.91
PABPC1P11940 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.75■□□□□ 0.91
PABPC1P11940 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.75■□□□□ 0.91
PABPC1P11940 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.75■□□□□ 0.91
PABPC1P11940 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PABPC1P11940 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PABPC1P11940 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PABPC1P11940 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PABPC1P11940 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PABPC1P11940 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PABPC1P11940 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PABPC1P11940 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PABPC1P11940 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.74■□□□□ 0.91
PABPC1P11940 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
PABPC1P11940 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PABPC1P11940 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PABPC1P11940 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.74■□□□□ 0.91
PABPC1P11940 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PABPC1P11940 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PABPC1P11940 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PABPC1P11940 KRT8P36-201ENST00000489121 1440 ntBASIC20.74■□□□□ 0.91
PABPC1P11940 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PABPC1P11940 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.74■□□□□ 0.91
PABPC1P11940 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.74■□□□□ 0.91
PABPC1P11940 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.74■□□□□ 0.91
PABPC1P11940 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.74■□□□□ 0.91
PABPC1P11940 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.74■□□□□ 0.91
PABPC1P11940 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PABPC1P11940 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PABPC1P11940 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PABPC1P11940 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.74■□□□□ 0.91
PABPC1P11940 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PABPC1P11940 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PABPC1P11940 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PABPC1P11940 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PABPC1P11940 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PABPC1P11940 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PABPC1P11940 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PABPC1P11940 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PABPC1P11940 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PABPC1P11940 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.73■□□□□ 0.91
PABPC1P11940 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PABPC1P11940 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PABPC1P11940 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PABPC1P11940 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PABPC1P11940 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PABPC1P11940 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PABPC1P11940 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.73■□□□□ 0.91
PABPC1P11940 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
PABPC1P11940 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PABPC1P11940 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PABPC1P11940 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.72■□□□□ 0.91
PABPC1P11940 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.72■□□□□ 0.91
PABPC1P11940 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
PABPC1P11940 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
PABPC1P11940 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PABPC1P11940 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PABPC1P11940 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PABPC1P11940 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PABPC1P11940 GCSHP5-201ENST00000443090 522 ntBASIC20.72■□□□□ 0.91
PABPC1P11940 RPS2P52-201ENST00000469610 820 ntBASIC20.72■□□□□ 0.91
PABPC1P11940 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.72■□□□□ 0.91
PABPC1P11940 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.72■□□□□ 0.91
PABPC1P11940 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.72■□□□□ 0.91
PABPC1P11940 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PABPC1P11940 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PABPC1P11940 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.72■□□□□ 0.91
PABPC1P11940 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PABPC1P11940 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PABPC1P11940 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
PABPC1P11940 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PABPC1P11940 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.71■□□□□ 0.91
PABPC1P11940 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PABPC1P11940 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.71■□□□□ 0.91
PABPC1P11940 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.71■□□□□ 0.91
PABPC1P11940 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PABPC1P11940 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PABPC1P11940 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.71■□□□□ 0.91
PABPC1P11940 KRT17P3-201ENST00000420566 1262 ntBASIC20.71■□□□□ 0.91
PABPC1P11940 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PABPC1P11940 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.71■□□□□ 0.91
PABPC1P11940 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PABPC1P11940 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PABPC1P11940 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PABPC1P11940 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
PABPC1P11940 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.7■□□□□ 0.9
PABPC1P11940 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PABPC1P11940 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PABPC1P11940 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PABPC1P11940 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PABPC1P11940 AC026310.3-201ENST00000625186 2373 ntBASIC20.7■□□□□ 0.9
PABPC1P11940 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PABPC1P11940 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PABPC1P11940 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.7■□□□□ 0.9
PABPC1P11940 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PABPC1P11940 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PABPC1P11940 AC142381.4-202ENST00000563973 229 ntBASIC20.7■□□□□ 0.9
PABPC1P11940 AC005829.2-201ENST00000571422 1056 ntBASIC20.7■□□□□ 0.9
PABPC1P11940 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.7■□□□□ 0.9
PABPC1P11940 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms