Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LINC00271P0C7V0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LINC00271P0C7V0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LINC00271P0C7V0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.61■■□□□ 1.05
LINC00271P0C7V0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
LINC00271P0C7V0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.61■■□□□ 1.05
LINC00271P0C7V0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
LINC00271P0C7V0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LINC00271P0C7V0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.61■■□□□ 1.05
LINC00271P0C7V0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
LINC00271P0C7V0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.61■■□□□ 1.05
LINC00271P0C7V0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.6■■□□□ 1.05
LINC00271P0C7V0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 KRT8P36-201ENST00000489121 1440 ntBASIC21.59■■□□□ 1.05
LINC00271P0C7V0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 AP000525.1-201ENST00000608286 694 ntBASIC21.59■■□□□ 1.05
LINC00271P0C7V0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.59■■□□□ 1.05
LINC00271P0C7V0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINC00271P0C7V0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINC00271P0C7V0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINC00271P0C7V0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LINC00271P0C7V0 AC005521.1-201ENST00000393351 872 ntBASIC21.58■■□□□ 1.05
LINC00271P0C7V0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.58■■□□□ 1.05
LINC00271P0C7V0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.58■■□□□ 1.05
LINC00271P0C7V0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINC00271P0C7V0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.58■■□□□ 1.05
LINC00271P0C7V0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
LINC00271P0C7V0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
LINC00271P0C7V0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LINC00271P0C7V0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.58■■□□□ 1.04
LINC00271P0C7V0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
LINC00271P0C7V0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.57■■□□□ 1.04
LINC00271P0C7V0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00271P0C7V0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00271P0C7V0 AC027702.1-201ENST00000563810 1770 ntBASIC21.57■■□□□ 1.04
LINC00271P0C7V0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00271P0C7V0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
LINC00271P0C7V0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.57■■□□□ 1.04
LINC00271P0C7V0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.57■■□□□ 1.04
LINC00271P0C7V0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.57■■□□□ 1.04
LINC00271P0C7V0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.57■■□□□ 1.04
LINC00271P0C7V0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.57■■□□□ 1.04
LINC00271P0C7V0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00271P0C7V0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00271P0C7V0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00271P0C7V0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
LINC00271P0C7V0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00271P0C7V0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00271P0C7V0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00271P0C7V0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.56■■□□□ 1.04
LINC00271P0C7V0 AC005363.2-201ENST00000618631 242 ntBASIC21.56■■□□□ 1.04
LINC00271P0C7V0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00271P0C7V0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00271P0C7V0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 AC073508.3-201ENST00000619697 1419 ntBASIC21.55■■□□□ 1.04
LINC00271P0C7V0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 ARMC10P1-201ENST00000313754 855 ntBASIC21.55■■□□□ 1.04
LINC00271P0C7V0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 AL049597.2-201ENST00000565575 961 ntBASIC21.55■■□□□ 1.04
LINC00271P0C7V0 CYP2D8P-201ENST00000433633 1490 ntBASIC21.55■■□□□ 1.04
LINC00271P0C7V0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms