Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT78Q8N1N4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
KRT78Q8N1N4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT78Q8N1N4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT78Q8N1N4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.6■□□□□ 0.73
KRT78Q8N1N4 CYP21A1P-202ENST00000354927 1481 ntBASIC19.6■□□□□ 0.73
KRT78Q8N1N4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT78Q8N1N4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT78Q8N1N4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT78Q8N1N4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT78Q8N1N4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 AC087633.2-202ENST00000565166 1439 ntBASIC19.59■□□□□ 0.73
KRT78Q8N1N4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 AC073314.1-201ENST00000568729 2216 ntBASIC19.59■□□□□ 0.73
KRT78Q8N1N4 LINC01521-201ENST00000504184 1943 ntBASIC19.59■□□□□ 0.73
KRT78Q8N1N4 AC020907.5-201ENST00000624372 1936 ntBASIC19.59■□□□□ 0.73
KRT78Q8N1N4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 AC073111.5-205ENST00000641717 521 ntBASIC19.59■□□□□ 0.73
KRT78Q8N1N4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 KRT8P36-201ENST00000489121 1440 ntBASIC19.59■□□□□ 0.73
KRT78Q8N1N4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT78Q8N1N4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KRT78Q8N1N4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KRT78Q8N1N4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KRT78Q8N1N4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KRT78Q8N1N4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
KRT78Q8N1N4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
KRT78Q8N1N4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KRT78Q8N1N4 AL157384.1-201ENST00000445995 2473 ntBASIC19.58■□□□□ 0.73
KRT78Q8N1N4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT78Q8N1N4 MCRIP2P1-201ENST00000394346 511 ntBASIC19.58■□□□□ 0.72
KRT78Q8N1N4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.58■□□□□ 0.72
KRT78Q8N1N4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.58■□□□□ 0.72
KRT78Q8N1N4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT78Q8N1N4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT78Q8N1N4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.58■□□□□ 0.72
KRT78Q8N1N4 AC005181.1-201ENST00000604782 1256 ntBASIC19.58■□□□□ 0.72
KRT78Q8N1N4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.58■□□□□ 0.72
KRT78Q8N1N4 OR10C1-204ENST00000622521 1039 ntBASIC19.58■□□□□ 0.72
KRT78Q8N1N4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
KRT78Q8N1N4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.58■□□□□ 0.72
KRT78Q8N1N4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.58■□□□□ 0.72
KRT78Q8N1N4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT78Q8N1N4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.58■□□□□ 0.72
KRT78Q8N1N4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT78Q8N1N4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT78Q8N1N4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 LINC01006-201ENST00000333319 2292 ntBASIC19.57■□□□□ 0.72
KRT78Q8N1N4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 AL356652.1-201ENST00000615962 565 ntBASIC19.57■□□□□ 0.72
KRT78Q8N1N4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.57■□□□□ 0.72
KRT78Q8N1N4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT78Q8N1N4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT78Q8N1N4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT78Q8N1N4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT78Q8N1N4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT78Q8N1N4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT78Q8N1N4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT78Q8N1N4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.56■□□□□ 0.72
KRT78Q8N1N4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.56■□□□□ 0.72
KRT78Q8N1N4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT78Q8N1N4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms