Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 tK(UUU)G1tK(UUU)G1 73 nt3.32□□□□□ -1.88
NRD1P53617 tK(UUU)G2tK(UUU)G2 73 nt3.32□□□□□ -1.88
NRD1P53617 tK(UUU)KtK(UUU)K 73 nt3.32□□□□□ -1.88
NRD1P53617 tK(UUU)LtK(UUU)L 73 nt3.32□□□□□ -1.88
NRD1P53617 tK(UUU)OtK(UUU)O 73 nt3.32□□□□□ -1.88
NRD1P53617 tK(UUU)PtK(UUU)P 73 nt3.32□□□□□ -1.88
NRD1P53617 NCE101YJL205C 162 nt3.32□□□□□ -1.88
NRD1P53617 SOD1YJR104C 465 nt3.32□□□□□ -1.88 RIP-Chip
NRD1P53617 RPL20BYOR312C 519 nt3.32□□□□□ -1.88
NRD1P53617 NCL1YBL024W 2055 nt3.32□□□□□ -1.88
NRD1P53617 MDV1YJL112W 2145 nt3.32□□□□□ -1.88
NRD1P53617 MSS11YMR164C 2277 nt3.32□□□□□ -1.88
NRD1P53617 YTA7YGR270W 4140 nt3.32□□□□□ -1.88 RIP-Chip
NRD1P53617 YEL043WYEL043W 2871 nt3.31□□□□□ -1.88
NRD1P53617 STU2YLR045C 2667 nt3.31□□□□□ -1.88
NRD1P53617 SPT21YMR179W 2277 nt3.31□□□□□ -1.88
NRD1P53617 KAR3YPR141C 2190 nt3.31□□□□□ -1.88
NRD1P53617 REC8YPR007C 2043 nt3.31□□□□□ -1.88
NRD1P53617 YCL046WYCL046W 324 nt3.31□□□□□ -1.88
NRD1P53617 CDC24YAL041W 2565 nt3.31□□□□□ -1.88
NRD1P53617 HEF3YNL014W 3135 nt3.3□□□□□ -1.88
NRD1P53617 NAT1YDL040C 2565 nt3.3□□□□□ -1.88
NRD1P53617 ARG5,6YER069W 2592 nt3.3□□□□□ -1.88
NRD1P53617 YDL041WYDL041W 354 nt3.3□□□□□ -1.88
NRD1P53617 YDR193WYDR193W 399 nt3.3□□□□□ -1.88
NRD1P53617 TRX1YLR043C 312 nt3.3□□□□□ -1.88
NRD1P53617 YML007C-AYML007C-A 111 nt3.3□□□□□ -1.88
NRD1P53617 YPL044CYPL044C 549 nt3.3□□□□□ -1.88
NRD1P53617 snR191snR191 274 nt3.3□□□□□ -1.88
NRD1P53617 SIN4YNL236W 2925 nt3.3□□□□□ -1.88
NRD1P53617 HSC82YMR186W 2118 nt3.29□□□□□ -1.88
NRD1P53617 FAP7YDL166C 594 nt3.29□□□□□ -1.88
NRD1P53617 YGR027W-BYGR027W-B 5268 nt3.29□□□□□ -1.88
NRD1P53617 YLR227W-BYLR227W-B 5268 nt3.29□□□□□ -1.88
NRD1P53617 YPR158C-DYPR158C-D 5268 nt3.29□□□□□ -1.88
NRD1P53617 YNL144CYNL144C 2223 nt3.29□□□□□ -1.88
NRD1P53617 SMC3YJL074C 3693 nt3.29□□□□□ -1.88
NRD1P53617 YFL065CYFL065C 309 nt3.28□□□□□ -1.88 RIP-Chip
NRD1P53617 YLR154W-AYLR154W-A 186 nt3.28□□□□□ -1.88
NRD1P53617 VTC4YJL012C 2166 nt3.28□□□□□ -1.88
NRD1P53617 NOC3YLR002C 1992 nt3.27□□□□□ -1.89
NRD1P53617 PAU10YDR542W 363 nt3.27□□□□□ -1.89
NRD1P53617 PAU11YGL261C 363 nt3.27□□□□□ -1.89
NRD1P53617 PAU13YHL046C 363 nt3.27□□□□□ -1.89
NRD1P53617 PAU4YLR461W 363 nt3.27□□□□□ -1.89
NRD1P53617 YBR174CYBR174C 315 nt3.27□□□□□ -1.89
NRD1P53617 LYS14YDR034C 2373 nt3.27□□□□□ -1.89
NRD1P53617 YRM1YOR172W 2361 nt3.27□□□□□ -1.89
NRD1P53617 AUS1YOR011W 4185 nt3.27□□□□□ -1.89
NRD1P53617 CWC22YGR278W 1734 nt3.27□□□□□ -1.89
NRD1P53617 YDL176WYDL176W 2127 nt3.26□□□□□ -1.89
NRD1P53617 BFR2YDR299W 1605 nt3.26□□□□□ -1.89
NRD1P53617 AI2Q0055 2565 nt3.26□□□□□ -1.89
NRD1P53617 YBR109W-AYBR109W-A 225 nt3.26□□□□□ -1.89
NRD1P53617 TIF4631YGR162W 2859 nt3.26□□□□□ -1.89
NRD1P53617 OAF3YKR064W 2592 nt3.26□□□□□ -1.89
NRD1P53617 NSP1YJL041W 2472 nt3.26□□□□□ -1.89
NRD1P53617 GSC2YGR032W 5688 nt3.26□□□□□ -1.89
NRD1P53617 REB1YBR049C 2433 nt3.25□□□□□ -1.89
NRD1P53617 ETP1YHL010C 1758 nt3.25□□□□□ -1.89
NRD1P53617 YDR034C-AYDR034C-A 177 nt3.25□□□□□ -1.89
NRD1P53617 YBL028CYBL028C 321 nt3.25□□□□□ -1.89
NRD1P53617 BMS1YPL217C 3552 nt3.25□□□□□ -1.89
NRD1P53617 PDR8YLR266C 2106 nt3.25□□□□□ -1.89
NRD1P53617 CIN8YEL061C 3003 nt3.24□□□□□ -1.89
NRD1P53617 snR79snR79 84 nt3.24□□□□□ -1.89
NRD1P53617 TIM11YDR322C-A 291 nt3.24□□□□□ -1.89
NRD1P53617 GRX8YLR364W 330 nt3.24□□□□□ -1.89
NRD1P53617 NUP85YJR042W 2235 nt3.24□□□□□ -1.89
NRD1P53617 SLY1YDR189W 2001 nt3.24□□□□□ -1.89
NRD1P53617 RRP5YMR229C 5190 nt3.23□□□□□ -1.89
NRD1P53617 NAB3YPL190C 2409 nt3.23□□□□□ -1.89 RIP-Chip
NRD1P53617 PEX1YKL197C 3132 nt3.23□□□□□ -1.89
NRD1P53617 YMR317WYMR317W 3423 nt3.23□□□□□ -1.89
NRD1P53617 CLN3YAL040C 1743 nt3.23□□□□□ -1.89
NRD1P53617 YKL050CYKL050C 2769 nt3.23□□□□□ -1.89
NRD1P53617 RPS21AYKR057W 264 nt3.23□□□□□ -1.89
NRD1P53617 YBR121C-AYBR121C-A 159 nt3.23□□□□□ -1.89
NRD1P53617 ISM1YPL040C 3009 nt3.23□□□□□ -1.89
NRD1P53617 SSY1YDR160W 2559 nt3.23□□□□□ -1.89
NRD1P53617 TCP1YDR212W 1680 nt3.23□□□□□ -1.89
NRD1P53617 REG1YDR028C 3045 nt3.22□□□□□ -1.89
NRD1P53617 NUP82YJL061W 2142 nt3.22□□□□□ -1.89
NRD1P53617 DIS3YOL021C 3006 nt3.22□□□□□ -1.89
NRD1P53617 YEL032C-AYEL032C-A 162 nt3.22□□□□□ -1.89
NRD1P53617 IRC3YDR332W 2070 nt3.22□□□□□ -1.89
NRD1P53617 HAL9YOL089C 3093 nt3.22□□□□□ -1.89
NRD1P53617 CAT2YML042W 2013 nt3.22□□□□□ -1.89
NRD1P53617 YEL025CYEL025C 3567 nt3.22□□□□□ -1.89
NRD1P53617 TMN3YER113C 2121 nt3.22□□□□□ -1.89
NRD1P53617 IMH1YLR309C 2736 nt3.21□□□□□ -1.89
NRD1P53617 MET10YFR030W 3108 nt3.21□□□□□ -1.9
NRD1P53617 TSA2YDR453C 591 nt3.21□□□□□ -1.9 RIP-Chip
NRD1P53617 ALY1YKR021W 2748 nt3.21□□□□□ -1.9
NRD1P53617 APL4YPR029C 2499 nt3.21□□□□□ -1.9
NRD1P53617 APL5YPL195W 2799 nt3.21□□□□□ -1.9
NRD1P53617 POL1YNL102W 4407 nt3.2□□□□□ -1.9
NRD1P53617 VID27YNL212W 2349 nt3.2□□□□□ -1.9 RIP-Chip
NRD1P53617 MSH4YFL003C 2637 nt3.2□□□□□ -1.9
NRD1P53617 MCM10YIL150C 1716 nt3.2□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 7.9 ms