Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 YFL002W-AYFL002W-A 5313 nt3.23□□□□□ -1.89
VPS53P47061 YGR161W-BYGR161W-B 5313 nt3.23□□□□□ -1.89
VPS53P47061 YLR410W-BYLR410W-B 5313 nt3.23□□□□□ -1.89
VPS53P47061 YCL019WYCL019W 5313 nt3.23□□□□□ -1.89
VPS53P47061 YHL005CYHL005C 393 nt3.23□□□□□ -1.89
VPS53P47061 YHL041WYHL041W 450 nt3.23□□□□□ -1.89
VPS53P47061 RAM2YKL019W 951 nt3.23□□□□□ -1.89
VPS53P47061 YLR053CYLR053C 327 nt3.23□□□□□ -1.89
VPS53P47061 YOR170WYOR170W 306 nt3.23□□□□□ -1.89
VPS53P47061 UBP14YBR058C 2346 nt3.22□□□□□ -1.89
VPS53P47061 RRM3YHR031C 2172 nt3.22□□□□□ -1.89
VPS53P47061 APC2YLR127C 2562 nt3.22□□□□□ -1.89
VPS53P47061 GCD6YDR211W 2139 nt3.22□□□□□ -1.89
VPS53P47061 HEH2YDR458C 1992 nt3.22□□□□□ -1.89
VPS53P47061 DYN2YDR424C 279 nt3.22□□□□□ -1.89
VPS53P47061 GPG1YGL121C 381 nt3.22□□□□□ -1.89
VPS53P47061 PHS1YJL097W 654 nt3.22□□□□□ -1.89
VPS53P47061 RPL6AYML073C 531 nt3.22□□□□□ -1.89
VPS53P47061 YMR172C-AYMR172C-A 384 nt3.22□□□□□ -1.89
VPS53P47061 YMR230W-AYMR230W-A 189 nt3.22□□□□□ -1.89
VPS53P47061 MRPL33YMR286W 261 nt3.22□□□□□ -1.89
VPS53P47061 GIS4YML006C 2325 nt3.22□□□□□ -1.89
VPS53P47061 PUF6YDR496C 1971 nt3.21□□□□□ -1.89
VPS53P47061 ECM21YBL101C 3354 nt3.21□□□□□ -1.89
VPS53P47061 MAK21YDR060W 3078 nt3.21□□□□□ -1.9
VPS53P47061 DUF1YOL087C 3351 nt3.21□□□□□ -1.9
VPS53P47061 SPB1YCL054W 2526 nt3.21□□□□□ -1.9
VPS53P47061 PSK1YAL017W 4071 nt3.2□□□□□ -1.9
VPS53P47061 MDM1YML104C 3384 nt3.2□□□□□ -1.9
VPS53P47061 KAR3YPR141C 2190 nt3.2□□□□□ -1.9
VPS53P47061 YDR098C-BYDR098C-B 5268 nt3.2□□□□□ -1.9
VPS53P47061 YDR210C-DYDR210C-D 5268 nt3.2□□□□□ -1.9
VPS53P47061 YDR316W-BYDR316W-B 5268 nt3.2□□□□□ -1.9
VPS53P47061 YDR365W-BYDR365W-B 5268 nt3.2□□□□□ -1.9
VPS53P47061 YER138CYER138C 5268 nt3.2□□□□□ -1.9
VPS53P47061 YER160CYER160C 5268 nt3.2□□□□□ -1.9
VPS53P47061 YGR038C-BYGR038C-B 5268 nt3.2□□□□□ -1.9
VPS53P47061 YGR161C-DYGR161C-D 5268 nt3.2□□□□□ -1.9
VPS53P47061 YJR027WYJR027W 5268 nt3.2□□□□□ -1.9
VPS53P47061 YLR157C-BYLR157C-B 5268 nt3.2□□□□□ -1.9
VPS53P47061 YML039WYML039W 5268 nt3.2□□□□□ -1.9
VPS53P47061 YML045WYML045W 5268 nt3.2□□□□□ -1.9
VPS53P47061 YMR050CYMR050C 5268 nt3.2□□□□□ -1.9
VPS53P47061 YOL103W-BYOL103W-B 5268 nt3.2□□□□□ -1.9
VPS53P47061 YBR012W-BYBR012W-B 5271 nt3.2□□□□□ -1.9
VPS53P47061 YOR142W-BYOR142W-B 5268 nt3.2□□□□□ -1.9
VPS53P47061 YPL257W-BYPL257W-B 5268 nt3.2□□□□□ -1.9
VPS53P47061 YPR158W-BYPR158W-B 5271 nt3.2□□□□□ -1.9
VPS53P47061 Q0143Q0143 153 nt3.2□□□□□ -1.9
VPS53P47061 YBR197CYBR197C 654 nt3.2□□□□□ -1.9
VPS53P47061 NPR3YHL023C 3441 nt3.2□□□□□ -1.9
VPS53P47061 DNA2YHR164C 4569 nt3.19□□□□□ -1.9
VPS53P47061 HHT1YBR010W 411 nt3.19□□□□□ -1.9
VPS53P47061 YPR063CYPR063C 423 nt3.19□□□□□ -1.9
VPS53P47061 MET5YJR137C 4329 nt3.19□□□□□ -1.9
VPS53P47061 GIN4YDR507C 3429 nt3.18□□□□□ -1.9
VPS53P47061 NUP120YKL057C 3114 nt3.18□□□□□ -1.9
VPS53P47061 TRS65YGR166W 1683 nt3.18□□□□□ -1.9
VPS53P47061 ATG13YPR185W 2217 nt3.18□□□□□ -1.9
VPS53P47061 RBK1YCR036W 1002 nt3.18□□□□□ -1.9
VPS53P47061 snR60snR60 104 nt3.18□□□□□ -1.9
VPS53P47061 PAU2YEL049W 363 nt3.18□□□□□ -1.9
VPS53P47061 YJL150WYJL150W 303 nt3.18□□□□□ -1.9
VPS53P47061 YJL070CYJL070C 2667 nt3.18□□□□□ -1.9
VPS53P47061 SNQ2YDR011W 4506 nt3.18□□□□□ -1.9
VPS53P47061 SGS1YMR190C 4344 nt3.17□□□□□ -1.9
VPS53P47061 NMD2YHR077C 3270 nt3.17□□□□□ -1.9
VPS53P47061 CDC20YGL116W 1833 nt3.17□□□□□ -1.9
VPS53P47061 ITC1YGL133W 3795 nt3.17□□□□□ -1.9
VPS53P47061 ERP6YGL002W 651 nt3.17□□□□□ -1.9
VPS53P47061 YGL024WYGL024W 336 nt3.17□□□□□ -1.9
VPS53P47061 CYB5YNL111C 363 nt3.17□□□□□ -1.9
VPS53P47061 FUN30YAL019W 3396 nt3.17□□□□□ -1.9
VPS53P47061 IPT1YDR072C 1584 nt3.17□□□□□ -1.9
VPS53P47061 NPC2YDL046W 522 nt3.16□□□□□ -1.9
VPS53P47061 YER088C-AYER088C-A 324 nt3.16□□□□□ -1.9
VPS53P47061 YGL052WYGL052W 306 nt3.16□□□□□ -1.9
VPS53P47061 YGL069CYGL069C 465 nt3.16□□□□□ -1.9
VPS53P47061 RPS27AYKL156W 249 nt3.16□□□□□ -1.9
VPS53P47061 YNL010WYNL010W 726 nt3.16□□□□□ -1.9
VPS53P47061 YNL170WYNL170W 396 nt3.16□□□□□ -1.9
VPS53P47061 DSE4YNR067C 3354 nt3.16□□□□□ -1.9
VPS53P47061 YLR278CYLR278C 4026 nt3.16□□□□□ -1.9
VPS53P47061 YAT2YER024W 2772 nt3.16□□□□□ -1.9
VPS53P47061 NCL1YBL024W 2055 nt3.15□□□□□ -1.9
VPS53P47061 PUF4YGL014W 2667 nt3.15□□□□□ -1.91
VPS53P47061 YLR154W-EYLR154W-E 204 nt3.15□□□□□ -1.91
VPS53P47061 YMR141W-AYMR141W-A 225 nt3.15□□□□□ -1.91
VPS53P47061 YOL057WYOL057W 2136 nt3.15□□□□□ -1.91
VPS53P47061 SCW11YGL028C 1629 nt3.15□□□□□ -1.91
VPS53P47061 ROM1YGR070W 3468 nt3.14□□□□□ -1.91
VPS53P47061 ILS1YBL076C 3219 nt3.14□□□□□ -1.91
VPS53P47061 BFA1YJR053W 1725 nt3.14□□□□□ -1.91
VPS53P47061 tF(GAA)QtF(GAA)Q 75 nt3.14□□□□□ -1.91
VPS53P47061 YIL059CYIL059C 366 nt3.14□□□□□ -1.91
VPS53P47061 RTC6YPL183W-A 282 nt3.14□□□□□ -1.91
VPS53P47061 YIL169CYIL169C 2988 nt3.14□□□□□ -1.91
VPS53P47061 RLI1YDR091C 1827 nt3.14□□□□□ -1.91
VPS53P47061 MDM20YOL076W 2391 nt3.14□□□□□ -1.91
VPS53P47061 YBL005W-BYBL005W-B 5268 nt3.13□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 83.3 ms