Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 YIL029CYIL029C 429 nt1.57□□□□□ -2.16
CDC40P40968 TRX1YLR043C 312 nt1.57□□□□□ -2.16
CDC40P40968 PGA1YNL158W 597 nt1.57□□□□□ -2.16
CDC40P40968 YOR152CYOR152C 771 nt1.57□□□□□ -2.16
CDC40P40968 INO80YGL150C 4470 nt1.57□□□□□ -2.16
CDC40P40968 FRK1YPL141C 2598 nt1.57□□□□□ -2.16
CDC40P40968 DAS1YJL149W 1992 nt1.57□□□□□ -2.16
CDC40P40968 VPS52YDR484W 1926 nt1.56□□□□□ -2.16
CDC40P40968 YJR098CYJR098C 1971 nt1.56□□□□□ -2.16
CDC40P40968 YKL123WYKL123W 381 nt1.56□□□□□ -2.16
CDC40P40968 TIF11YMR260C 462 nt1.56□□□□□ -2.16
CDC40P40968 PEP3YLR148W 2757 nt1.56□□□□□ -2.16
CDC40P40968 YOR019WYOR019W 2193 nt1.55□□□□□ -2.16
CDC40P40968 RBK1YCR036W 1002 nt1.55□□□□□ -2.16
CDC40P40968 YER175W-AYER175W-A 165 nt1.55□□□□□ -2.16
CDC40P40968 SEN15YMR059W 387 nt1.55□□□□□ -2.16
CDC40P40968 MSS18YPR134W 807 nt1.55□□□□□ -2.16
CDC40P40968 NOP53YPL146C 1368 nt1.55□□□□□ -2.16
CDC40P40968 TDA9YML081W 3756 nt1.55□□□□□ -2.16
CDC40P40968 YGR109W-BYGR109W-B 4644 nt1.54□□□□□ -2.16
CDC40P40968 RTP1YMR185W 2946 nt1.54□□□□□ -2.16
CDC40P40968 BRR2YER172C 6492 nt1.54□□□□□ -2.16
CDC40P40968 YCR043CYCR043C 384 nt1.54□□□□□ -2.16
CDC40P40968 snR79snR79 84 nt1.54□□□□□ -2.16
CDC40P40968 YEL057CYEL057C 702 nt1.54□□□□□ -2.16
CDC40P40968 IES5YER092W 378 nt1.54□□□□□ -2.16
CDC40P40968 RPC10YHR143W-A 213 nt1.54□□□□□ -2.16
CDC40P40968 AIM18YHR198C 966 nt1.54□□□□□ -2.16
CDC40P40968 ALK2YBL009W 2031 nt1.54□□□□□ -2.16
CDC40P40968 SXM1YDR395W 2835 nt1.53□□□□□ -2.16
CDC40P40968 UTP21YLR409C 2820 nt1.53□□□□□ -2.16
CDC40P40968 PMD1YER132C 5262 nt1.53□□□□□ -2.16
CDC40P40968 YDL041WYDL041W 354 nt1.53□□□□□ -2.16
CDC40P40968 PRM8YGL053W 714 nt1.53□□□□□ -2.16
CDC40P40968 YGR250CYGR250C 2346 nt1.53□□□□□ -2.16
CDC40P40968 ATP7YKL016C 525 nt1.53□□□□□ -2.16
CDC40P40968 HSL1YKL101W 4557 nt1.53□□□□□ -2.16
CDC40P40968 MSS11YMR164C 2277 nt1.53□□□□□ -2.16
CDC40P40968 MMS22YLR320W 4365 nt1.52□□□□□ -2.17
CDC40P40968 SKI3YPR189W 4299 nt1.52□□□□□ -2.17
CDC40P40968 SSQ1YLR369W 1974 nt1.52□□□□□ -2.17
CDC40P40968 YEL018C-AYEL018C-A 534 nt1.52□□□□□ -2.17
CDC40P40968 SMB1YER029C 591 nt1.52□□□□□ -2.17
CDC40P40968 MCM22YJR135C 720 nt1.52□□□□□ -2.17
CDC40P40968 TUS1YLR425W 3924 nt1.52□□□□□ -2.17
CDC40P40968 COX1Q0045 1605 nt1.51□□□□□ -2.17
CDC40P40968 CTR9YOL145C 3234 nt1.51□□□□□ -2.17
CDC40P40968 CTF4YPR135W 2784 nt1.51□□□□□ -2.17
CDC40P40968 CRG1YHR209W 876 nt1.51□□□□□ -2.17
CDC40P40968 YMR230W-AYMR230W-A 189 nt1.51□□□□□ -2.17
CDC40P40968 PET123YOR158W 957 nt1.51□□□□□ -2.17
CDC40P40968 YBR184WYBR184W 1572 nt1.51□□□□□ -2.17
CDC40P40968 YGR283CYGR283C 1026 nt1.5□□□□□ -2.17
CDC40P40968 MRPL44YMR225C 297 nt1.5□□□□□ -2.17
CDC40P40968 SPO24YPR036W-A 204 nt1.5□□□□□ -2.17
CDC40P40968 YNL284C-BYNL284C-B 5268 nt1.5□□□□□ -2.17
CDC40P40968 PIK1YNL267W 3201 nt1.5□□□□□ -2.17
CDC40P40968 MDM20YOL076W 2391 nt1.5□□□□□ -2.17
CDC40P40968 OCA6YDR067C 675 nt1.49□□□□□ -2.17
CDC40P40968 YKL183C-AYKL183C-A 213 nt1.49□□□□□ -2.17
CDC40P40968 RPS22BYLR367W 393 nt1.49□□□□□ -2.17
CDC40P40968 PKR1YMR123W 369 nt1.49□□□□□ -2.17
CDC40P40968 MSC6YOR354C 2079 nt1.48□□□□□ -2.17
CDC40P40968 YER088C-AYER088C-A 324 nt1.48□□□□□ -2.17
CDC40P40968 YJR079WYJR079W 330 nt1.48□□□□□ -2.17
CDC40P40968 BER1YLR412W 825 nt1.48□□□□□ -2.17
CDC40P40968 CGI121YML036W 546 nt1.48□□□□□ -2.17
CDC40P40968 RLM1YPL089C 2031 nt1.48□□□□□ -2.17
CDC40P40968 YDR029WYDR029W 315 nt1.47□□□□□ -2.17
CDC40P40968 ATP17YDR377W 306 nt1.47□□□□□ -2.17
CDC40P40968 YER188C-AYER188C-A 300 nt1.47□□□□□ -2.17
CDC40P40968 YGL024WYGL024W 336 nt1.47□□□□□ -2.17
CDC40P40968 RPL42BYHR141C 321 nt1.47□□□□□ -2.17
CDC40P40968 RPL42AYNL162W 321 nt1.47□□□□□ -2.17
CDC40P40968 YHR214C-CYHR214C-C 1437 nt1.47□□□□□ -2.17
CDC40P40968 HKR1YDR420W 5409 nt1.46□□□□□ -2.18
CDC40P40968 YER068C-AYER068C-A 432 nt1.46□□□□□ -2.18
CDC40P40968 YER172C-AYER172C-A 381 nt1.46□□□□□ -2.18
CDC40P40968 YHR052W-AYHR052W-A 195 nt1.46□□□□□ -2.18
CDC40P40968 YHR054W-AYHR054W-A 195 nt1.46□□□□□ -2.18
CDC40P40968 UBX4YMR067C 1251 nt1.46□□□□□ -2.18
CDC40P40968 SLM6YBR266C 453 nt1.46□□□□□ -2.18
CDC40P40968 SWT1YOR166C 1377 nt1.46□□□□□ -2.18
CDC40P40968 PPN1YDR452W 2025 nt1.45□□□□□ -2.18
CDC40P40968 HMI1YOL095C 2121 nt1.45□□□□□ -2.18
CDC40P40968 EMP24YGL200C 612 nt1.45□□□□□ -2.18
CDC40P40968 SYM1YLR251W 594 nt1.45□□□□□ -2.18
CDC40P40968 FMP23YBR047W 528 nt1.45□□□□□ -2.18
CDC40P40968 SVS1YPL163C 783 nt1.45□□□□□ -2.18
CDC40P40968 YPR146CYPR146C 330 nt1.45□□□□□ -2.18
CDC40P40968 DOT6YER088C 2013 nt1.44□□□□□ -2.18
CDC40P40968 SEF1YBL066C 3447 nt1.44□□□□□ -2.18
CDC40P40968 YDL016CYDL016C 303 nt1.44□□□□□ -2.18
CDC40P40968 YHR214W-AYHR214W-A 486 nt1.44□□□□□ -2.18
CDC40P40968 YJR141WYJR141W 1044 nt1.44□□□□□ -2.18
CDC40P40968 YAR068WYAR068W 486 nt1.44□□□□□ -2.18
CDC40P40968 IRC16YPR038W 360 nt1.44□□□□□ -2.18
CDC40P40968 YCL023CYCL023C 348 nt1.44□□□□□ -2.18
CDC40P40968 SSK2YNR031C 4740 nt1.44□□□□□ -2.18
CDC40P40968 YKL044WYKL044W 321 nt1.43□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 66.4 ms