Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 TIM13YGR181W 318 nt3.25□□□□□ -1.89
PUF4P25339 DBP7YKR024C 2229 nt3.25□□□□□ -1.89 RIP-Chip
PUF4P25339 SCW11YGL028C 1629 nt3.25□□□□□ -1.89
PUF4P25339 KEL2YGR238C 2649 nt3.24□□□□□ -1.89
PUF4P25339 FLO5YHR211W 3228 nt3.24□□□□□ -1.89
PUF4P25339 COG8YML071C 1824 nt3.24□□□□□ -1.89
PUF4P25339 YKU70YMR284W 1809 nt3.24□□□□□ -1.89
PUF4P25339 PUF4YGL014W 2667 nt3.24□□□□□ -1.89 RIP-Chip
PUF4P25339 snR76snR76 109 nt3.24□□□□□ -1.89
PUF4P25339 TIM11YDR322C-A 291 nt3.24□□□□□ -1.89
PUF4P25339 PRE4YFR050C 801 nt3.24□□□□□ -1.89
PUF4P25339 PHS1YJL097W 654 nt3.24□□□□□ -1.89
PUF4P25339 RPS12YOR369C 432 nt3.24□□□□□ -1.89
PUF4P25339 CHO2YGR157W 2610 nt3.24□□□□□ -1.89
PUF4P25339 REV3YPL167C 4515 nt3.23□□□□□ -1.89
PUF4P25339 snR55snR55 98 nt3.23□□□□□ -1.89
PUF4P25339 GPG1YGL121C 381 nt3.23□□□□□ -1.89
PUF4P25339 YIL032CYIL032C 357 nt3.23□□□□□ -1.89
PUF4P25339 YJL135WYJL135W 318 nt3.23□□□□□ -1.89
PUF4P25339 YLR012CYLR012C 300 nt3.23□□□□□ -1.89
PUF4P25339 YLR342W-AYLR342W-A 174 nt3.23□□□□□ -1.89
PUF4P25339 PRP39YML046W 1890 nt3.23□□□□□ -1.89 RIP-Chip
PUF4P25339 YMR324CYMR324C 243 nt3.23□□□□□ -1.89
PUF4P25339 YBR197CYBR197C 654 nt3.23□□□□□ -1.89
PUF4P25339 STE6YKL209C 3873 nt3.23□□□□□ -1.89
PUF4P25339 DBP10YDL031W 2988 nt3.22□□□□□ -1.89 RIP-Chip
PUF4P25339 DSE4YNR067C 3354 nt3.22□□□□□ -1.89
PUF4P25339 PUF6YDR496C 1971 nt3.22□□□□□ -1.89 RIP-Chip
PUF4P25339 YMR230W-AYMR230W-A 189 nt3.22□□□□□ -1.89
PUF4P25339 MDM1YML104C 3384 nt3.21□□□□□ -1.89
PUF4P25339 GIN4YDR507C 3429 nt3.21□□□□□ -1.9
PUF4P25339 YMR172C-AYMR172C-A 384 nt3.21□□□□□ -1.9
PUF4P25339 ASG1YIL130W 2895 nt3.2□□□□□ -1.9
PUF4P25339 YHL042WYHL042W 453 nt3.2□□□□□ -1.9
PUF4P25339 YMR194C-AYMR194C-A 225 nt3.2□□□□□ -1.9
PUF4P25339 YBR121C-AYBR121C-A 159 nt3.2□□□□□ -1.9
PUF4P25339 SOK2YMR016C 2358 nt3.2□□□□□ -1.9
PUF4P25339 DIS3YOL021C 3006 nt3.2□□□□□ -1.9
PUF4P25339 GCD6YDR211W 2139 nt3.19□□□□□ -1.9
PUF4P25339 YGL052WYGL052W 306 nt3.19□□□□□ -1.9
PUF4P25339 RPL36AYMR194W 303 nt3.19□□□□□ -1.9 RIP-Chip
PUF4P25339 POL3YDL102W 3294 nt3.19□□□□□ -1.9
PUF4P25339 FRE2YKL220C 2136 nt3.19□□□□□ -1.9
PUF4P25339 STT4YLR305C 5703 nt3.18□□□□□ -1.9
PUF4P25339 QCR7YDR529C 384 nt3.18□□□□□ -1.9
PUF4P25339 CDC20YGL116W 1833 nt3.18□□□□□ -1.9
PUF4P25339 ORC1YML065W 2745 nt3.18□□□□□ -1.9
PUF4P25339 KSP1YHR082C 3090 nt3.18□□□□□ -1.9
PUF4P25339 FLO1YAR050W 4614 nt3.17□□□□□ -1.9
PUF4P25339 RAX2YLR084C 3663 nt3.17□□□□□ -1.9
PUF4P25339 RPS27AYKL156W 249 nt3.17□□□□□ -1.9 RIP-Chip
PUF4P25339 RPL25YOL127W 429 nt3.17□□□□□ -1.9
PUF4P25339 snR48snR48 113 nt3.17□□□□□ -1.9
PUF4P25339 RSN1YMR266W 2862 nt3.17□□□□□ -1.9 RIP-Chip
PUF4P25339 PAU2YEL049W 363 nt3.16□□□□□ -1.9
PUF4P25339 YMR141W-AYMR141W-A 225 nt3.16□□□□□ -1.9
PUF4P25339 DNL4YOR005C 2835 nt3.16□□□□□ -1.9
PUF4P25339 ROG1YGL144C 2058 nt3.16□□□□□ -1.9
PUF4P25339 HEH2YDR458C 1992 nt3.16□□□□□ -1.9
PUF4P25339 SAK1YER129W 3429 nt3.16□□□□□ -1.9
PUF4P25339 YJL070CYJL070C 2667 nt3.16□□□□□ -1.9 RIP-Chip
PUF4P25339 MSB2YGR014W 3921 nt3.15□□□□□ -1.9
PUF4P25339 VIK1YPL253C 1944 nt3.15□□□□□ -1.9 RIP-Chip
PUF4P25339 YHR080CYHR080C 4038 nt3.15□□□□□ -1.9
PUF4P25339 YGL024WYGL024W 336 nt3.15□□□□□ -1.91
PUF4P25339 YLR053CYLR053C 327 nt3.15□□□□□ -1.91
PUF4P25339 SAR1YPL218W 573 nt3.15□□□□□ -1.91
PUF4P25339 KAR3YPR141C 2190 nt3.15□□□□□ -1.91
PUF4P25339 YOR296WYOR296W 3870 nt3.14□□□□□ -1.91 RIP-Chip
PUF4P25339 tF(GAA)QtF(GAA)Q 75 nt3.14□□□□□ -1.91
PUF4P25339 YGL014C-AYGL014C-A 162 nt3.14□□□□□ -1.91
PUF4P25339 LSO2YGR169C-A 279 nt3.14□□□□□ -1.91
PUF4P25339 PHD1YKL043W 1101 nt3.14□□□□□ -1.91
PUF4P25339 NET1YJL076W 3570 nt3.14□□□□□ -1.91
PUF4P25339 RGR1YLR071C 3249 nt3.14□□□□□ -1.91
PUF4P25339 RIM20YOR275C 1986 nt3.13□□□□□ -1.91
PUF4P25339 YLR140WYLR140W 327 nt3.13□□□□□ -1.91
PUF4P25339 YPR063CYPR063C 423 nt3.13□□□□□ -1.91
PUF4P25339 YPR089WYPR089W 2667 nt3.13□□□□□ -1.91
PUF4P25339 BFA1YJR053W 1725 nt3.13□□□□□ -1.91
PUF4P25339 MET6YER091C 2304 nt3.13□□□□□ -1.91
PUF4P25339 RLI1YDR091C 1827 nt3.12□□□□□ -1.91
PUF4P25339 BUB1YGR188C 3066 nt3.12□□□□□ -1.91
PUF4P25339 GCV2YMR189W 3105 nt3.12□□□□□ -1.91
PUF4P25339 YHL041WYHL041W 450 nt3.12□□□□□ -1.91
PUF4P25339 RGM1YMR182C 636 nt3.12□□□□□ -1.91
PUF4P25339 HHT1YBR010W 411 nt3.12□□□□□ -1.91 RIP-Chip
PUF4P25339 YBR178WYBR178W 375 nt3.12□□□□□ -1.91
PUF4P25339 IPT1YDR072C 1584 nt3.12□□□□□ -1.91
PUF4P25339 JSN1YJR091C 3276 nt3.11□□□□□ -1.91
PUF4P25339 YIL059CYIL059C 366 nt3.11□□□□□ -1.91
PUF4P25339 MRPL33YMR286W 261 nt3.11□□□□□ -1.91
PUF4P25339 CYB5YNL111C 363 nt3.11□□□□□ -1.91 RIP-Chip
PUF4P25339 FUN30YAL019W 3396 nt3.11□□□□□ -1.91
PUF4P25339 ECM21YBL101C 3354 nt3.11□□□□□ -1.91
PUF4P25339 MDM20YOL076W 2391 nt3.1□□□□□ -1.91 RIP-Chip
PUF4P25339 NFT1YKR103W 3657 nt3.1□□□□□ -1.91
PUF4P25339 RBK1YCR036W 1002 nt3.1□□□□□ -1.91
PUF4P25339 YGR164WYGR164W 336 nt3.1□□□□□ -1.91
PUF4P25339 UBP14YBR058C 2346 nt3.1□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 52.8 ms