Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 VPS28-208ENST00000527797 1609 ntTSL 523.55■■□□□ 1.367e-6■□□□□ 8.8
XRCC6P12956 VPS28-206ENST00000526734 570 ntTSL 223.02■■□□□ 1.287e-6■□□□□ 8.8
XRCC6P12956 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.137e-6■□□□□ 8.8
XRCC6P12956 VPS28-207ENST00000526977 2036 ntTSL 522.04■■□□□ 1.127e-6■□□□□ 8.8
XRCC6P12956 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.067e-6■□□□□ 8.8
XRCC6P12956 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.45■■□□□ 1.027e-6■□□□□ 8.8
XRCC6P12956 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.847e-6■□□□□ 8.8
XRCC6P12956 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.51■□□□□ 0.717e-6■□□□□ 8.8
XRCC6P12956 HNRNPDL-202ENST00000349655 1402 ntTSL 1 (best)19.45■□□□□ 0.74e-12■□□□□ 8.8
XRCC6P12956 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.74e-12■□□□□ 8.8
XRCC6P12956 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.674e-12■□□□□ 8.8
XRCC6P12956 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.594e-12■□□□□ 8.8
XRCC6P12956 HNRNPDL-205ENST00000514511 1143 ntTSL 218.09■□□□□ 0.494e-12■□□□□ 8.8
XRCC6P12956 DNTTIP2-203ENST00000460191 3084 ntTSL 217.54■□□□□ 0.47e-6■□□□□ 8.8
XRCC6P12956 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.394e-12■□□□□ 8.8
XRCC6P12956 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC17.32■□□□□ 0.367e-6■□□□□ 8.8
XRCC6P12956 POTEE-203ENST00000514256 2072 ntTSL 217.21■□□□□ 0.357e-6■□□□□ 8.8
XRCC6P12956 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.09■□□□□ 0.337e-6■□□□□ 8.8
XRCC6P12956 LTBP4-217ENST00000597151 285 ntTSL 216.98■□□□□ 0.317e-6■□□□□ 8.8
XRCC6P12956 YWHAE-204ENST00000486241 691 ntTSL 216.65■□□□□ 0.267e-6■□□□□ 8.8
XRCC6P12956 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.237e-6■□□□□ 8.8
XRCC6P12956 VPS28-215ENST00000531924 695 ntTSL 316.36■□□□□ 0.217e-6■□□□□ 8.8
XRCC6P12956 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.27e-6■□□□□ 8.8
XRCC6P12956 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.117e-6■□□□□ 8.8
XRCC6P12956 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.59■□□□□ 0.094e-12■□□□□ 8.8
XRCC6P12956 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.037e-6■□□□□ 8.8
XRCC6P12956 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.89□□□□□ -0.037e-6■□□□□ 8.8
XRCC6P12956 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.89□□□□□ -0.037e-6■□□□□ 8.8
XRCC6P12956 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.074e-12■□□□□ 8.8
XRCC6P12956 POTEE-202ENST00000358087 2147 ntTSL 214.59□□□□□ -0.077e-6■□□□□ 8.8
XRCC6P12956 VPS28-216ENST00000533806 650 ntTSL 314.52□□□□□ -0.097e-6■□□□□ 8.8
XRCC6P12956 POTEE-205ENST00000626191 2027 ntTSL 2 BASIC14.51□□□□□ -0.097e-6■□□□□ 8.8
XRCC6P12956 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC14.31□□□□□ -0.127e-6■□□□□ 8.8
XRCC6P12956 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC13.88□□□□□ -0.197e-6■□□□□ 8.8
XRCC6P12956 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.287e-6■□□□□ 8.8
XRCC6P12956 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.347e-6■□□□□ 8.8
XRCC6P12956 YWHAE-205ENST00000489287 465 ntTSL 212.68□□□□□ -0.387e-6■□□□□ 8.8
XRCC6P12956 VPS28-214ENST00000531032 573 ntTSL 1 (best)12.61□□□□□ -0.397e-6■□□□□ 8.8
XRCC6P12956 MKLN1-209ENST00000494785 2386 ntTSL 1 (best)12.45□□□□□ -0.427e-6■□□□□ 8.8
XRCC6P12956 VPS13D-210ENST00000489961 443 ntTSL 512.15□□□□□ -0.467e-6■□□□□ 8.8
XRCC6P12956 YWHAE-210ENST00000573026 780 ntTSL 3 BASIC11.72□□□□□ -0.537e-6■□□□□ 8.8
XRCC6P12956 YWHAE-211ENST00000573196 739 ntTSL 211.72□□□□□ -0.537e-6■□□□□ 8.8
XRCC6P12956 MAPK3-211ENST00000483869 738 ntTSL 311.52□□□□□ -0.574e-12■□□□□ 8.8
XRCC6P12956 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.574e-12■□□□□ 8.8
XRCC6P12956 CSNK1A1-208ENST00000523203 775 ntTSL 511.33□□□□□ -0.67e-6■□□□□ 8.8
XRCC6P12956 VPS28-204ENST00000526054 892 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.617e-6■□□□□ 8.8
XRCC6P12956 MAPK3-210ENST00000481230 465 ntTSL 510.87□□□□□ -0.674e-12■□□□□ 8.8
XRCC6P12956 MKLN1-206ENST00000458153 2448 ntTSL 210□□□□□ -0.817e-6■□□□□ 8.8
XRCC6P12956 YWHAE-203ENST00000469398 676 ntTSL 29.95□□□□□ -0.827e-6■□□□□ 8.8
XRCC6P12956 TAF13-202ENST00000461096 1076 ntTSL 59.36□□□□□ -0.917e-6■□□□□ 8.8
XRCC6P12956 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.947e-6■□□□□ 8.8
XRCC6P12956 DNTTIP2-201ENST00000359208 2199 ntTSL 29.05□□□□□ -0.967e-6■□□□□ 8.8
XRCC6P12956 YLPM1-205ENST00000549293 5500 ntTSL 1 (best)8.75□□□□□ -1.017e-6■□□□□ 8.8
XRCC6P12956 BTF3-209ENST00000514505 740 ntTSL 56.63□□□□□ -1.357e-6■□□□□ 8.8
XRCC6P12956 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.367e-6■□□□□ 8.8
XRCC6P12956 BTF3-208ENST00000514360 1177 ntTSL 26.56□□□□□ -1.367e-6■□□□□ 8.8
XRCC6P12956 ZC3H11A-210ENST00000488411 574 ntTSL 26.51□□□□□ -1.377e-6■□□□□ 8.8
XRCC6P12956 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.427e-6■□□□□ 8.8
XRCC6P12956 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.89□□□□□ -1.477e-6■□□□□ 8.8
XRCC6P12956 ZC3H11A-215ENST00000640465 4365 ntTSL 1 (best)5.42□□□□□ -1.547e-6■□□□□ 8.8
XRCC6P12956 BTF3-205ENST00000509708 515 ntTSL 55.05□□□□□ -1.67e-6■□□□□ 8.8
XRCC6P12956 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.817e-6■□□□□ 8.8
XRCC6P12956 ACTB-211ENST00000480301 657 ntTSL 1 (best)23.4■■□□□ 1.344e-22■□□□□ 8.8
XRCC6P12956 ACTB-212ENST00000484841 1032 ntTSL 522.4■■□□□ 1.184e-22■□□□□ 8.8
XRCC6P12956 ACTB-210ENST00000477812 820 ntTSL 222.3■■□□□ 1.164e-22■□□□□ 8.8
XRCC6P12956 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.954e-22■□□□□ 8.8
XRCC6P12956 ACTB-207ENST00000462494 2245 ntTSL 520.9■□□□□ 0.944e-22■□□□□ 8.8
XRCC6P12956 ACTB-205ENST00000432588 568 ntTSL 417.98■□□□□ 0.474e-22■□□□□ 8.8
XRCC6P12956 ACTB-206ENST00000443528 569 ntTSL 417.55■□□□□ 0.44e-22■□□□□ 8.8
XRCC6P12956 ACTB-204ENST00000425660 1845 ntTSL 1 (best)17.45■□□□□ 0.384e-22■□□□□ 8.8
XRCC6P12956 ACTB-202ENST00000414620 561 ntTSL 417.22■□□□□ 0.354e-22■□□□□ 8.8
XRCC6P12956 ACTB-209ENST00000473257 556 ntTSL 312.35□□□□□ -0.434e-22■□□□□ 8.8
XRCC6P12956 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.39■■■□□ 2.786e-7■□□□□ 8.7
XRCC6P12956 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.12■■■□□ 2.736e-7■□□□□ 8.7
XRCC6P12956 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.45■■■□□ 2.636e-7■□□□□ 8.7
XRCC6P12956 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.45■■■□□ 2.636e-7■□□□□ 8.7
XRCC6P12956 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.43■■■□□ 2.146e-7■□□□□ 8.7
XRCC6P12956 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC24.2■■□□□ 1.466e-7■□□□□ 8.7
XRCC6P12956 KCNH2-204ENST00000461280 2430 ntTSL 1 (best)24.1■■□□□ 1.456e-7■□□□□ 8.7
XRCC6P12956 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.376e-7■□□□□ 8.7
XRCC6P12956 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.366e-7■□□□□ 8.7
XRCC6P12956 KCNH2-205ENST00000473610 2782 ntTSL 222.91■■□□□ 1.266e-7■□□□□ 8.7
XRCC6P12956 KCNH2-206ENST00000532957 3374 ntTSL 222.78■■□□□ 1.246e-7■□□□□ 8.7
XRCC6P12956 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC22.62■■□□□ 1.216e-7■□□□□ 8.7
XRCC6P12956 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.676e-13■□□□□ 8.7
XRCC6P12956 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.93■□□□□ 0.626e-13■□□□□ 8.7
XRCC6P12956 SLC4A2-210ENST00000480107 793 ntTSL 215.64■□□□□ 0.096e-7■□□□□ 8.7
XRCC6P12956 MDC1-209ENST00000613547 830 ntTSL 5 BASIC14.82□□□□□ -0.046e-7■□□□□ 8.7
XRCC6P12956 HSP90B1-203ENST00000548462 3032 ntTSL 214.68□□□□□ -0.066e-13■□□□□ 8.7
XRCC6P12956 PTRH2-201ENST00000393038 901 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.276e-7■□□□□ 8.7
XRCC6P12956 PTRH2-202ENST00000409433 2246 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.476e-7■□□□□ 8.7
XRCC6P12956 PPP2R5A-202ENST00000479259 740 ntTSL 57.31□□□□□ -1.246e-7■□□□□ 8.7
XRCC6P12956 GART-213ENST00000467575 922 ntTSL 36.77□□□□□ -1.336e-7■□□□□ 8.7
XRCC6P12956 HSP90B1-206ENST00000550479 698 ntTSL 25.82□□□□□ -1.486e-13■□□□□ 8.7
XRCC6P12956 PPP2R5A-203ENST00000498123 399 ntTSL 25.45□□□□□ -1.546e-7■□□□□ 8.7
XRCC6P12956 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.26□□□□□ -1.576e-7■□□□□ 8.7
XRCC6P12956 PPP2R5A-204ENST00000498129 745 ntTSL 54.91□□□□□ -1.626e-7■□□□□ 8.7
XRCC6P12956 PTRH2-205ENST00000587935 409 ntTSL 34.4□□□□□ -1.716e-7■□□□□ 8.7
XRCC6P12956 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.31□□□□□ -2.046e-7■□□□□ 8.7
XRCC6P12956 TAF7-203ENST00000624761 603 ntTSL 422.22■■□□□ 1.151e-6■□□□□ 8.7
Retrieved 100 of 6,788 protein–RNA pairs in 214.7 ms