RNA–Protein interactions for RNA: ENST00000421797.6

MKLN1-203, Transcript of muskelin 1, humanhuman

TSL 2 BASIC

Gene MKLN1, Length 2,460 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKLN1-203ENST00000421797 NISCHQ9Y2I1 1504 aa29.43■■■□□ 2.3
MKLN1-203ENST00000421797 CCDC180Q9P1Z9 1646 aa26.3■■□□□ 1.8
MKLN1-203ENST00000421797 ABCC9O60706 1549 aa25.67■■□□□ 1.7
MKLN1-203ENST00000421797 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
MKLN1-203ENST00000421797 NACADO15069 1562 aa24.73■■□□□ 1.55
MKLN1-203ENST00000421797 MYO15BQ96JP2 1530 aa24.59■■□□□ 1.53
MKLN1-203ENST00000421797 ZCCHC6Q5VYS8 1495 aaKnown RBP24.5■■□□□ 1.51
MKLN1-203ENST00000421797 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
MKLN1-203ENST00000421797 DCAF1Q9Y4B6 1507 aa24.43■■□□□ 1.5
MKLN1-203ENST00000421797 UNC13AQ9UPW8 1703 aa24.17■■□□□ 1.46
MKLN1-203ENST00000421797 BICRAQ9NZM4 1560 aa23.97■■□□□ 1.43
MKLN1-203ENST00000421797 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
MKLN1-203ENST00000421797 SCRIBQ14160 1630 aa23.86■■□□□ 1.41
MKLN1-203ENST00000421797 SHROOM4Q9ULL8 1493 aa23.85■■□□□ 1.41
MKLN1-203ENST00000421797 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
MKLN1-203ENST00000421797 EIF4G1Q04637 1599 aaKnown RBP23.36■■□□□ 1.33
MKLN1-203ENST00000421797 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
MKLN1-203ENST00000421797 CECR2Q9BXF3 1484 aa23.12■■□□□ 1.29
MKLN1-203ENST00000421797 SMARCA4P51532 1647 aa22.87■■□□□ 1.25
MKLN1-203ENST00000421797 BAZ1AQ9NRL2 1556 aaPredicted RBP22.84■■□□□ 1.25
MKLN1-203ENST00000421797 PELP1Q8IZL8 1130 aaKnown RBP22.84■■□□□ 1.25
MKLN1-203ENST00000421797 NCAPD3P42695 1498 aa22.79■■□□□ 1.24
MKLN1-203ENST00000421797 SMARCA2P51531 1590 aa22.77■■□□□ 1.24
MKLN1-203ENST00000421797 ATAD2BQ9ULI0 1458 aa22.75■■□□□ 1.23
MKLN1-203ENST00000421797 HRCP23327 699 aa22.71■■□□□ 1.23
MKLN1-203ENST00000421797 PEG3Q9GZU2 1588 aa22.69■■□□□ 1.22
MKLN1-203ENST00000421797 HMGXB3Q12766 1538 aa22.69■■□□□ 1.22
MKLN1-203ENST00000421797 MROH2BQ7Z745 1585 aa22.64■■□□□ 1.21
MKLN1-203ENST00000421797 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
MKLN1-203ENST00000421797 WIZO95785 1651 aa22.39■■□□□ 1.17
MKLN1-203ENST00000421797 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
MKLN1-203ENST00000421797 PPARGC1BQ86YN6 1023 aaKnown RBP22.31■■□□□ 1.16
MKLN1-203ENST00000421797 LAMC3Q9Y6N6 1575 aa22.23■■□□□ 1.15
MKLN1-203ENST00000421797 TOP2AP11388 1531 aaKnown RBP22.2■■□□□ 1.14
MKLN1-203ENST00000421797 NESP48681 1621 aa22.18■■□□□ 1.14
MKLN1-203ENST00000421797 ERCC6Q03468 1493 aa22.18■■□□□ 1.14
MKLN1-203ENST00000421797 MYT1Q01538 1121 aa22.11■■□□□ 1.13
MKLN1-203ENST00000421797 CADPSQ9ULU8 1353 aa22.09■■□□□ 1.13
MKLN1-203ENST00000421797 CUX2O14529 1486 aa22.06■■□□□ 1.12
MKLN1-203ENST00000421797 PDS5BQ9NTI5 1447 aa22.06■■□□□ 1.12
MKLN1-203ENST00000421797 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
MKLN1-203ENST00000421797 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
MKLN1-203ENST00000421797 CFTRP13569 1480 aa21.95■■□□□ 1.1
MKLN1-203ENST00000421797 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.1
MKLN1-203ENST00000421797 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
MKLN1-203ENST00000421797 PCGF6Q9BYE7 350 aa21.87■■□□□ 1.09
MKLN1-203ENST00000421797 PRDM2Q13029 1718 aa21.84■■□□□ 1.09
MKLN1-203ENST00000421797 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.08
MKLN1-203ENST00000421797 MRC2Q9UBG0 1479 aa21.83■■□□□ 1.08
MKLN1-203ENST00000421797 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.08
MKLN1-203ENST00000421797 WDR62O43379 1518 aa21.78■■□□□ 1.08
MKLN1-203ENST00000421797 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
MKLN1-203ENST00000421797 SUPT5HO00267 1087 aaKnown RBP21.6■■□□□ 1.05
MKLN1-203ENST00000421797 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
MKLN1-203ENST00000421797 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
MKLN1-203ENST00000421797 DNMBPQ6XZF7 1577 aa21.47■■□□□ 1.03
MKLN1-203ENST00000421797 DNAJC5Q9H3Z4 198 aa21.44■■□□□ 1.02
MKLN1-203ENST00000421797 IFT140Q96RY7 1462 aa21.4■■□□□ 1.02
MKLN1-203ENST00000421797 POLA1P09884 1462 aaPredicted RBP21.28■■□□□ 1
MKLN1-203ENST00000421797 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
MKLN1-203ENST00000421797 CUX1P39880 1505 aa21.26■□□□□ 0.99
MKLN1-203ENST00000421797 ZNF608Q9ULD9 1512 aaPredicted RBP21.23■□□□□ 0.99
MKLN1-203ENST00000421797 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
MKLN1-203ENST00000421797 EIF4G3O43432 1585 aaKnown RBP21.19■□□□□ 0.98
MKLN1-203ENST00000421797 WDR97A6NE52 1622 aa21.19■□□□□ 0.98
MKLN1-203ENST00000421797 SOGA1O94964 1423 aa21.18■□□□□ 0.98
MKLN1-203ENST00000421797 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.97
MKLN1-203ENST00000421797 ACIN1Q9UKV3 1341 aaKnown RBP21.12■□□□□ 0.97
MKLN1-203ENST00000421797 BIVM-ERCC5R4GMW8 1640 aa21.1■□□□□ 0.97
MKLN1-203ENST00000421797 AQRO60306 1485 aaKnown RBP eCLIP21.09■□□□□ 0.973e-6■■■■□ 24.7
MKLN1-203ENST00000421797 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
MKLN1-203ENST00000421797 TOP2BQ02880 1626 aa21.09■□□□□ 0.97
MKLN1-203ENST00000421797 NEUROD1Q13562 356 aa21.08■□□□□ 0.97
MKLN1-203ENST00000421797 OSCARQ8IYS5 282 aa21.06■□□□□ 0.96
MKLN1-203ENST00000421797 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
MKLN1-203ENST00000421797 TDRD9Q8NDG6 1382 aaKnown RBP21.03■□□□□ 0.96
MKLN1-203ENST00000421797 SYNJ1O43426 1573 aa21.03■□□□□ 0.96
MKLN1-203ENST00000421797 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
MKLN1-203ENST00000421797 GTF3C3Q9Y5Q9 886 aa20.99■□□□□ 0.95
MKLN1-203ENST00000421797 GRIN2BQ13224 1484 aa20.98■□□□□ 0.95
MKLN1-203ENST00000421797 TTBK1Q5TCY1 1321 aaPredicted RBP20.96■□□□□ 0.95
MKLN1-203ENST00000421797 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
MKLN1-203ENST00000421797 MAGI1Q96QZ7 1491 aaPredicted RBP20.96■□□□□ 0.95
MKLN1-203ENST00000421797 GAPVD1Q14C86 1478 aa20.95■□□□□ 0.94
MKLN1-203ENST00000421797 CHD1O14646 1710 aa20.95■□□□□ 0.94
MKLN1-203ENST00000421797 PBRM1Q86U86 1689 aa20.94■□□□□ 0.94
MKLN1-203ENST00000421797 SNAPC4Q5SXM2 1469 aa20.93■□□□□ 0.94
MKLN1-203ENST00000421797 TRIM26Q12899 539 aaPredicted RBP20.91■□□□□ 0.94
MKLN1-203ENST00000421797 ZEB1P37275 1124 aaPredicted RBP20.9■□□□□ 0.94
MKLN1-203ENST00000421797 SYNJ2O15056 1496 aa20.86■□□□□ 0.93
MKLN1-203ENST00000421797 FBLN2P98095 1184 aa20.82■□□□□ 0.92
MKLN1-203ENST00000421797 BCL11AQ9H165 835 aa20.82■□□□□ 0.92
MKLN1-203ENST00000421797 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
MKLN1-203ENST00000421797 ERICH3Q5RHP9 1530 aa20.8■□□□□ 0.92
MKLN1-203ENST00000421797 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
MKLN1-203ENST00000421797 CLASP1Q7Z460 1538 aa20.74■□□□□ 0.91
MKLN1-203ENST00000421797 RIMBP3CA6NJZ7 1639 aa20.74■□□□□ 0.91
MKLN1-203ENST00000421797 RIMBP3BA6NNM3 1639 aa20.74■□□□□ 0.91
MKLN1-203ENST00000421797 RIMBP3Q9UFD9 1639 aa20.74■□□□□ 0.91
MKLN1-203ENST00000421797 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms