Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 SNORD70.1-201ENST00000391007 85 ntBASIC2.49□□□□□ -2.018e-50■■■□□ 18.4
DKC1O60832 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.893e-6■■■□□ 18.3
DKC1O60832 IQSEC1-202ENST00000473088 545 ntTSL 418.9■□□□□ 0.623e-6■■■□□ 18.3
DKC1O60832 IQSEC1-205ENST00000618604 3744 ntTSL 1 (best) BASIC11.74□□□□□ -0.533e-6■■■□□ 18.3
DKC1O60832 IQSEC1-203ENST00000474467 436 ntTSL 39.2□□□□□ -0.943e-6■■■□□ 18.3
DKC1O60832 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC14.41□□□□□ -0.12e-7■■■□□ 18.3
DKC1O60832 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC11.23□□□□□ -0.612e-7■■■□□ 18.3
DKC1O60832 AC104809.2-202ENST00000457369 800 ntTSL 319.61■□□□□ 0.732e-11■■■□□ 18.3
DKC1O60832 TEAD4-207ENST00000543035 801 ntTSL 529.08■■■□□ 2.256e-9■■■□□ 18.2
DKC1O60832 STRN3-207ENST00000555358 2208 ntTSL 1 (best)25.4■■□□□ 1.661e-26■■■□□ 18.2
DKC1O60832 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.79■■□□□ 1.562e-8■■■□□ 18.2
DKC1O60832 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.473e-7■■■□□ 18.2
DKC1O60832 NDST1-206ENST00000522491 777 ntTSL 223.43■■□□□ 1.343e-7■■■□□ 18.2
DKC1O60832 NDST1-204ENST00000519157 576 ntTSL 522.39■■□□□ 1.173e-7■■■□□ 18.2
DKC1O60832 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.933e-7■■■□□ 18.2
DKC1O60832 TEAD4-206ENST00000540314 578 ntTSL 419.83■□□□□ 0.776e-9■■■□□ 18.2
DKC1O60832 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.47■□□□□ 0.716e-9■■■□□ 18.2
DKC1O60832 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.681e-26■■■□□ 18.2
DKC1O60832 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.663e-7■■■□□ 18.2
DKC1O60832 TEAD4-205ENST00000536826 570 ntTSL 419.13■□□□□ 0.656e-9■■■□□ 18.2
DKC1O60832 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.66e-9■■■□□ 18.2
DKC1O60832 PNPO-216ENST00000641856 2619 nt18.72■□□□□ 0.593e-7■■■□□ 18.2
DKC1O60832 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.67■□□□□ 0.583e-7■■■□□ 18.2
DKC1O60832 NDST1-202ENST00000518299 769 ntTSL 218.66■□□□□ 0.583e-7■■■□□ 18.2
DKC1O60832 GTF2IRD1-207ENST00000489094 2274 ntTSL 518.06■□□□□ 0.483e-7■■■□□ 18.2
DKC1O60832 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.88■□□□□ 0.453e-7■■■□□ 18.2
DKC1O60832 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.78■□□□□ 0.442e-8■■■□□ 18.2
DKC1O60832 ASCC3-205ENST00000468245 1227 ntTSL 217.3■□□□□ 0.363e-7■■■□□ 18.2
DKC1O60832 ANKMY1-222ENST00000484526 2969 ntTSL 217.18■□□□□ 0.343e-7■■■□□ 18.2
DKC1O60832 PNPO-208ENST00000585320 503 ntTSL 317.16■□□□□ 0.343e-7■■■□□ 18.2
DKC1O60832 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.08■□□□□ 0.322e-8■■■□□ 18.2
DKC1O60832 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.03■□□□□ 0.326e-9■■■□□ 18.2
DKC1O60832 NDST1-203ENST00000518346 496 ntTSL 317.03■□□□□ 0.323e-7■■■□□ 18.2
DKC1O60832 NDST1-208ENST00000524161 437 ntTSL 217.01■□□□□ 0.313e-7■■■□□ 18.2
DKC1O60832 ASCC3-202ENST00000324723 852 ntTSL 316.89■□□□□ 0.293e-7■■■□□ 18.2
DKC1O60832 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.293e-7■■■□□ 18.2
DKC1O60832 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.73■□□□□ 0.273e-7■■■□□ 18.2
DKC1O60832 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.263e-7■■■□□ 18.2
DKC1O60832 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.37■□□□□ 0.213e-7■■■□□ 18.2
DKC1O60832 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.06■□□□□ 0.161e-26■■■□□ 18.2
DKC1O60832 PNPO-212ENST00000641427 1411 nt15.48■□□□□ 0.073e-7■■■□□ 18.2
DKC1O60832 TMEM184B-213ENST00000633438 1369 ntTSL 515.43■□□□□ 0.063e-7■■■□□ 18.2
DKC1O60832 PNPO-203ENST00000582171 1372 ntTSL 214.9□□□□□ -0.023e-7■■■□□ 18.2
DKC1O60832 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.88□□□□□ -0.033e-7■■■□□ 18.2
DKC1O60832 PNPO-215ENST00000641709 3232 nt14.87□□□□□ -0.033e-7■■■□□ 18.2
DKC1O60832 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.033e-7■■■□□ 18.2
DKC1O60832 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.143e-7■■■□□ 18.2
DKC1O60832 TEAD4-204ENST00000443986 641 ntTSL 314.13□□□□□ -0.156e-9■■■□□ 18.2
DKC1O60832 TMEM184B-205ENST00000436674 3667 ntTSL 1 (best)14.09□□□□□ -0.153e-7■■■□□ 18.2
DKC1O60832 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.163e-7■■■□□ 18.2
DKC1O60832 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC13.99□□□□□ -0.173e-7■■■□□ 18.2
DKC1O60832 ASCC3-201ENST00000324696 3618 ntTSL 213.68□□□□□ -0.223e-7■■■□□ 18.2
DKC1O60832 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.65□□□□□ -0.223e-7■■■□□ 18.2
DKC1O60832 PNPO-214ENST00000641703 1131 nt13.64□□□□□ -0.233e-7■■■□□ 18.2
DKC1O60832 TMEM184B-201ENST00000361684 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.263e-7■■■□□ 18.2
DKC1O60832 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC13.41□□□□□ -0.263e-7■■■□□ 18.2
DKC1O60832 NDST1-207ENST00000523767 3449 ntTSL 2 BASIC13.38□□□□□ -0.273e-7■■■□□ 18.2
DKC1O60832 PNPO-210ENST00000641305 3315 nt13.09□□□□□ -0.313e-7■■■□□ 18.2
DKC1O60832 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.383e-7■■■□□ 18.2
DKC1O60832 ANKMY1-221ENST00000480230 4640 ntTSL 212.64□□□□□ -0.393e-7■■■□□ 18.2
DKC1O60832 STRN3-203ENST00000366206 575 ntTSL 412.55□□□□□ -0.41e-26■■■□□ 18.2
DKC1O60832 PNPO-211ENST00000641323 3657 nt12.54□□□□□ -0.43e-7■■■□□ 18.2
DKC1O60832 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.423e-7■■■□□ 18.2
DKC1O60832 ASCC3-204ENST00000369162 8146 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.483e-7■■■□□ 18.2
DKC1O60832 ARMC9-214ENST00000611582 5759 ntTSL 5 BASIC12□□□□□ -0.493e-7■■■□□ 18.2
DKC1O60832 PNPO-206ENST00000584061 723 ntTSL 411.88□□□□□ -0.513e-7■■■□□ 18.2
DKC1O60832 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.613e-7■■■□□ 18.2
DKC1O60832 ANKMY1-217ENST00000459901 3936 ntTSL 411.13□□□□□ -0.633e-7■■■□□ 18.2
DKC1O60832 PNPO-204ENST00000583245 518 ntTSL 511.01□□□□□ -0.653e-7■■■□□ 18.2
DKC1O60832 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.652e-8■■■□□ 18.2
DKC1O60832 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.693e-7■■■□□ 18.2
DKC1O60832 PNPO-205ENST00000583599 696 ntTSL 410.64□□□□□ -0.713e-7■■■□□ 18.2
DKC1O60832 PNPO-209ENST00000641285 488 nt10.44□□□□□ -0.743e-7■■■□□ 18.2
DKC1O60832 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC10.34□□□□□ -0.752e-8■■■□□ 18.2
DKC1O60832 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.793e-7■■■□□ 18.2
DKC1O60832 STRN3-205ENST00000554991 417 ntTSL 59.6□□□□□ -0.871e-26■■■□□ 18.2
DKC1O60832 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.933e-7■■■□□ 18.2
DKC1O60832 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC8.95□□□□□ -0.983e-7■■■□□ 18.2
DKC1O60832 PNPO-213ENST00000641511 453 nt8.92□□□□□ -0.983e-7■■■□□ 18.2
DKC1O60832 RPL35A-208ENST00000485439 677 ntTSL 28.74□□□□□ -1.013e-7■■■□□ 18.2
DKC1O60832 STRN3-208ENST00000556577 514 ntTSL 58.7□□□□□ -1.021e-26■■■□□ 18.2
DKC1O60832 RPL35A-209ENST00000496582 579 ntTSL 27.86□□□□□ -1.153e-7■■■□□ 18.2
DKC1O60832 AEBP2-206ENST00000538425 518 ntAPPRIS ALT2 TSL 47.84□□□□□ -1.153e-7■■■□□ 18.2
DKC1O60832 RPL35A-203ENST00000439255 564 ntTSL 56.83□□□□□ -1.323e-7■■■□□ 18.2
DKC1O60832 RPL35A-201ENST00000329092 456 ntTSL 36.25□□□□□ -1.413e-7■■■□□ 18.2
DKC1O60832 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.513e-7■■■□□ 18.2
DKC1O60832 RPL35A-202ENST00000429437 442 ntTSL 55.36□□□□□ -1.553e-7■■■□□ 18.2
DKC1O60832 SHANK2-216ENST00000482659 381 ntTSL 35.15□□□□□ -1.592e-13■■■□□ 18.2
DKC1O60832 RPL35A-204ENST00000442341 517 ntTSL 34.79□□□□□ -1.643e-7■■■□□ 18.2
DKC1O60832 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.613e-7■■■□□ 18.2
DKC1O60832 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.352e-6■■■□□ 18.2
DKC1O60832 ANKLE2-207ENST00000539605 10890 ntTSL 1 (best)16.12■□□□□ 0.172e-6■■■□□ 18.2
DKC1O60832 ANKLE2-205ENST00000538591 886 ntTSL 39.6□□□□□ -0.872e-6■■■□□ 18.2
DKC1O60832 ANKLE2-211ENST00000545623 1288 ntTSL 38.94□□□□□ -0.982e-6■■■□□ 18.2
DKC1O60832 ANKLE2-204ENST00000535036 741 ntTSL 57.71□□□□□ -1.182e-6■■■□□ 18.2
DKC1O60832 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.142e-7■■■□□ 18.2
DKC1O60832 RABGGTB-201ENST00000319942 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.614e-37■■■□□ 18.2
DKC1O60832 RABGGTB-208ENST00000471759 2137 ntTSL 27.01□□□□□ -1.294e-37■■■□□ 18.2
DKC1O60832 RABGGTB-212ENST00000491266 961 ntTSL 36.72□□□□□ -1.334e-37■■■□□ 18.2
DKC1O60832 RABGGTB-209ENST00000473406 721 ntTSL 56.71□□□□□ -1.344e-37■■■□□ 18.2
Retrieved 100 of 8,567 protein–RNA pairs in 156.5 ms