RNA–Protein interactions for RNA: ENST00000464167.5

RPL35A-206, Transcript of ribosomal protein L35a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL35A, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-206ENST00000464167 AEBP2Q6ZN18 517 aaPredicted RBP31.93■■■□□ 2.7
RPL35A-206ENST00000464167 CHIC1Q5VXU3 224 aa30.56■■■□□ 2.48
RPL35A-206ENST00000464167 NISCHQ9Y2I1 1504 aa29.6■■■□□ 2.33
RPL35A-206ENST00000464167 SENP3Q9H4L4 574 aaPredicted RBP27.24■■□□□ 1.95
RPL35A-206ENST00000464167 PHF23Q9BUL5 403 aaPredicted RBP26.92■■□□□ 1.9
RPL35A-206ENST00000464167 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
RPL35A-206ENST00000464167 FOXD1Q16676 465 aa25.35■■□□□ 1.65
RPL35A-206ENST00000464167 ABCC9O60706 1549 aa25.16■■□□□ 1.62
RPL35A-206ENST00000464167 ZCCHC6Q5VYS8 1495 aaKnown RBP24.74■■□□□ 1.55
RPL35A-206ENST00000464167 DCAF8L2P0C7V8 631 aa24.57■■□□□ 1.52
RPL35A-206ENST00000464167 PLPPR3Q6T4P5 718 aa24.54■■□□□ 1.52
RPL35A-206ENST00000464167 DCAF1Q9Y4B6 1507 aa24.52■■□□□ 1.52
RPL35A-206ENST00000464167 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
RPL35A-206ENST00000464167 NACADO15069 1562 aa24.47■■□□□ 1.51
RPL35A-206ENST00000464167 RB1CC1Q8TDY2 1594 aa24.39■■□□□ 1.49
RPL35A-206ENST00000464167 PPP6R1Q9UPN7 881 aa23.87■■□□□ 1.41
RPL35A-206ENST00000464167 SCRIBQ14160 1630 aa23.85■■□□□ 1.41
RPL35A-206ENST00000464167 ADRA2BP18089 450 aa23.84■■□□□ 1.41
RPL35A-206ENST00000464167 PIAS4Q8N2W9 510 aaPredicted RBP23.77■■□□□ 1.4
RPL35A-206ENST00000464167 UNC13AQ9UPW8 1703 aa23.77■■□□□ 1.4
RPL35A-206ENST00000464167 MSH5O43196 834 aa23.64■■□□□ 1.37
RPL35A-206ENST00000464167 SHROOM4Q9ULL8 1493 aa23.63■■□□□ 1.37
RPL35A-206ENST00000464167 BICRAQ9NZM4 1560 aa23.62■■□□□ 1.37
RPL35A-206ENST00000464167 PABPN1Q86U42 306 aaKnown RBP eCLIP23.59■■□□□ 1.37
RPL35A-206ENST00000464167 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
RPL35A-206ENST00000464167 EIF4G1Q04637 1599 aaKnown RBP22.98■■□□□ 1.27
RPL35A-206ENST00000464167 BAZ1AQ9NRL2 1556 aaPredicted RBP22.91■■□□□ 1.26
RPL35A-206ENST00000464167 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
RPL35A-206ENST00000464167 MROH2BQ7Z745 1585 aa22.81■■□□□ 1.24
RPL35A-206ENST00000464167 CC2D2AQ9P2K1 1620 aa22.77■■□□□ 1.24
RPL35A-206ENST00000464167 DNAJC5BQ9UF47 199 aa22.73■■□□□ 1.23
RPL35A-206ENST00000464167 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
RPL35A-206ENST00000464167 POTEDQ86YR6 584 aa22.68■■□□□ 1.22
RPL35A-206ENST00000464167 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
RPL35A-206ENST00000464167 SMARCA2P51531 1590 aa22.65■■□□□ 1.22
RPL35A-206ENST00000464167 PEG3Q9GZU2 1588 aa22.65■■□□□ 1.22
RPL35A-206ENST00000464167 NCAPD3P42695 1498 aa22.59■■□□□ 1.21
RPL35A-206ENST00000464167 WIZO95785 1651 aa22.56■■□□□ 1.2
RPL35A-206ENST00000464167 HMGXB3Q12766 1538 aa22.5■■□□□ 1.19
RPL35A-206ENST00000464167 BAZ1BQ9UIG0 1483 aaKnown RBP22.49■■□□□ 1.19
RPL35A-206ENST00000464167 SUPT5HO00267 1087 aaKnown RBP22.45■■□□□ 1.18
RPL35A-206ENST00000464167 TOP2AP11388 1531 aaKnown RBP22.37■■□□□ 1.17
RPL35A-206ENST00000464167 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
RPL35A-206ENST00000464167 CADPSQ9ULU8 1353 aa21.95■■□□□ 1.1
RPL35A-206ENST00000464167 CFTRP13569 1480 aa21.91■■□□□ 1.1
RPL35A-206ENST00000464167 LAMC3Q9Y6N6 1575 aa21.9■■□□□ 1.1
RPL35A-206ENST00000464167 NESP48681 1621 aa21.89■■□□□ 1.09
RPL35A-206ENST00000464167 SCAF1Q9H7N4 1312 aaKnown RBP21.84■■□□□ 1.09
RPL35A-206ENST00000464167 MAPK8IP2Q13387 824 aaPredicted RBP21.83■■□□□ 1.09
RPL35A-206ENST00000464167 PDS5BQ9NTI5 1447 aa21.77■■□□□ 1.08
RPL35A-206ENST00000464167 PRDM2Q13029 1718 aa21.7■■□□□ 1.06
RPL35A-206ENST00000464167 FANCD2Q9BXW9 1451 aa21.69■■□□□ 1.06
RPL35A-206ENST00000464167 ERCC6Q03468 1493 aa21.66■■□□□ 1.06
RPL35A-206ENST00000464167 CEP164Q9UPV0 1460 aa21.62■■□□□ 1.05
RPL35A-206ENST00000464167 DMRT2Q9Y5R5 561 aa21.62■■□□□ 1.05
RPL35A-206ENST00000464167 KIF21AQ7Z4S6 1674 aa21.61■■□□□ 1.05
RPL35A-206ENST00000464167 PPP4R3CPQ6ZMV5 832 aa21.55■■□□□ 1.04
RPL35A-206ENST00000464167 MRC2Q9UBG0 1479 aa21.51■■□□□ 1.03
RPL35A-206ENST00000464167 THOC2Q8NI27 1593 aaKnown RBP21.46■■□□□ 1.03
RPL35A-206ENST00000464167 URB2Q14146 1524 aaKnown RBP21.44■■□□□ 1.02
RPL35A-206ENST00000464167 ABCC8Q09428 1581 aa21.42■■□□□ 1.02
RPL35A-206ENST00000464167 WDR62O43379 1518 aa21.42■■□□□ 1.02
RPL35A-206ENST00000464167 WRNQ14191 1432 aaPredicted RBP eCLIP21.41■■□□□ 1.02
RPL35A-206ENST00000464167 DNMBPQ6XZF7 1577 aa21.39■■□□□ 1.01
RPL35A-206ENST00000464167 TOPBP1Q92547 1522 aa21.38■■□□□ 1.01
RPL35A-206ENST00000464167 CUX1P39880 1505 aa21.37■■□□□ 1.01
RPL35A-206ENST00000464167 SYNJ1O43426 1573 aa21.31■■□□□ 1
RPL35A-206ENST00000464167 TOP2BQ02880 1626 aa21.3■■□□□ 1
RPL35A-206ENST00000464167 CUX2O14529 1486 aa21.29■■□□□ 1
RPL35A-206ENST00000464167 BIVM-ERCC5R4GMW8 1640 aa21.28■■□□□ 1
RPL35A-206ENST00000464167 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
RPL35A-206ENST00000464167 POLA1P09884 1462 aaPredicted RBP21.23■□□□□ 0.99
RPL35A-206ENST00000464167 TRIM41Q8WV44 630 aa21.2■□□□□ 0.98
RPL35A-206ENST00000464167 SOGA1O94964 1423 aa21.17■□□□□ 0.98
RPL35A-206ENST00000464167 IFT140Q96RY7 1462 aa21.16■□□□□ 0.98
RPL35A-206ENST00000464167 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.97
RPL35A-206ENST00000464167 TARBP1Q13395 1621 aaKnown RBP21.1■□□□□ 0.97
RPL35A-206ENST00000464167 CNKSR2Q8WXI2 1034 aa21.09■□□□□ 0.97
RPL35A-206ENST00000464167 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
RPL35A-206ENST00000464167 ZNF608Q9ULD9 1512 aaPredicted RBP21.01■□□□□ 0.95
RPL35A-206ENST00000464167 WDR97A6NE52 1622 aa21.01■□□□□ 0.95
RPL35A-206ENST00000464167 TDRD9Q8NDG6 1382 aaKnown RBP20.99■□□□□ 0.95
RPL35A-206ENST00000464167 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.951e-7■■■■■ 32.4
RPL35A-206ENST00000464167 KIF27Q86VH2 1401 aa20.93■□□□□ 0.94
RPL35A-206ENST00000464167 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
RPL35A-206ENST00000464167 GAPVD1Q14C86 1478 aa20.92■□□□□ 0.94
RPL35A-206ENST00000464167 ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
RPL35A-206ENST00000464167 HOXD11P31277 338 aaPredicted RBP20.9■□□□□ 0.94
RPL35A-206ENST00000464167 GRIN2BQ13224 1484 aa20.87■□□□□ 0.93
RPL35A-206ENST00000464167 RUSC2Q8N2Y8 1516 aa20.85■□□□□ 0.93
RPL35A-206ENST00000464167 DCAF8L1A6NGE4 600 aa20.82■□□□□ 0.92
RPL35A-206ENST00000464167 NCBP3Q53F19 620 aaKnown RBP20.82■□□□□ 0.92
RPL35A-206ENST00000464167 RNF216Q9NWF9 866 aaPredicted RBP20.82■□□□□ 0.92
RPL35A-206ENST00000464167 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
RPL35A-206ENST00000464167 EEA1Q15075 1411 aa20.81■□□□□ 0.92
RPL35A-206ENST00000464167 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
RPL35A-206ENST00000464167 IGF1RP08069 1367 aa20.8■□□□□ 0.92
RPL35A-206ENST00000464167 SNAPC4Q5SXM2 1469 aa20.77■□□□□ 0.91
RPL35A-206ENST00000464167 MAGI1Q96QZ7 1491 aaPredicted RBP20.77■□□□□ 0.91
RPL35A-206ENST00000464167 FAM9AQ8IZU1 332 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms