RNA–Protein interactions for RNA: ENST00000329092.12

RPL35A-201, Transcript of ribosomal protein L35a, humanhuman

TSL 3

Gene RPL35A, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-201ENST00000329092 AEBP2Q6ZN18 517 aaPredicted RBP17.8■□□□□ 0.44
RPL35A-201ENST00000329092 CHIC1Q5VXU3 224 aa17.1■□□□□ 0.33
RPL35A-201ENST00000329092 SENP3Q9H4L4 574 aaPredicted RBP15.17■□□□□ 0.02
RPL35A-201ENST00000329092 PHF23Q9BUL5 403 aaPredicted RBP15.01□□□□□ -0.01
RPL35A-201ENST00000329092 NISCHQ9Y2I1 1504 aa14.56□□□□□ -0.08
RPL35A-201ENST00000329092 FOXD1Q16676 465 aa14.1□□□□□ -0.15
RPL35A-201ENST00000329092 PLPPR3Q6T4P5 718 aa13.78□□□□□ -0.2
RPL35A-201ENST00000329092 ABCC9O60706 1549 aa13.46□□□□□ -0.25
RPL35A-201ENST00000329092 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
RPL35A-201ENST00000329092 ADRA2BP18089 450 aa13.33□□□□□ -0.28
RPL35A-201ENST00000329092 PIAS4Q8N2W9 510 aaPredicted RBP13.26□□□□□ -0.29
RPL35A-201ENST00000329092 MSH5O43196 834 aa13.14□□□□□ -0.31
RPL35A-201ENST00000329092 CCDC180Q9P1Z9 1646 aa13.02□□□□□ -0.32
RPL35A-201ENST00000329092 DNAJC5BQ9UF47 199 aa13.01□□□□□ -0.33
RPL35A-201ENST00000329092 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
RPL35A-201ENST00000329092 RB1CC1Q8TDY2 1594 aa12.57□□□□□ -0.4
RPL35A-201ENST00000329092 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
RPL35A-201ENST00000329092 POTEDQ86YR6 584 aa12.47□□□□□ -0.41
RPL35A-201ENST00000329092 NACADO15069 1562 aa12.43□□□□□ -0.42
RPL35A-201ENST00000329092 BICRAQ9NZM4 1560 aa12.32□□□□□ -0.44
RPL35A-201ENST00000329092 UNC13AQ9UPW8 1703 aa12.3□□□□□ -0.44
RPL35A-201ENST00000329092 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
RPL35A-201ENST00000329092 MAPK8IP2Q13387 824 aaPredicted RBP12.19□□□□□ -0.46
RPL35A-201ENST00000329092 MYO15BQ96JP2 1530 aa12.16□□□□□ -0.46
RPL35A-201ENST00000329092 CECR2Q9BXF3 1484 aa12.12□□□□□ -0.47
RPL35A-201ENST00000329092 PPP4R3CPQ6ZMV5 832 aa12.11□□□□□ -0.47
RPL35A-201ENST00000329092 CC2D2AQ9P2K1 1620 aa12.08□□□□□ -0.48
RPL35A-201ENST00000329092 DMRT2Q9Y5R5 561 aa12.05□□□□□ -0.48
RPL35A-201ENST00000329092 DNAJC5Q9H3Z4 198 aa12.01□□□□□ -0.49
RPL35A-201ENST00000329092 ZCCHC6Q5VYS8 1495 aaKnown RBP12□□□□□ -0.49
RPL35A-201ENST00000329092 EIF4G1Q04637 1599 aaKnown RBP12□□□□□ -0.49
RPL35A-201ENST00000329092 SCRIBQ14160 1630 aa11.98□□□□□ -0.49
RPL35A-201ENST00000329092 SHROOM4Q9ULL8 1493 aa11.95□□□□□ -0.5
RPL35A-201ENST00000329092 DCAF1Q9Y4B6 1507 aa11.94□□□□□ -0.5
RPL35A-201ENST00000329092 CNKSR2Q8WXI2 1034 aa11.83□□□□□ -0.52
RPL35A-201ENST00000329092 NCBP3Q53F19 620 aaKnown RBP11.72□□□□□ -0.53
RPL35A-201ENST00000329092 HOXD11P31277 338 aaPredicted RBP11.68□□□□□ -0.54
RPL35A-201ENST00000329092 RNF216Q9NWF9 866 aaPredicted RBP11.66□□□□□ -0.54
RPL35A-201ENST00000329092 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
RPL35A-201ENST00000329092 CUX2O14529 1486 aa11.59□□□□□ -0.55
RPL35A-201ENST00000329092 ERCC6Q03468 1493 aa11.57□□□□□ -0.56
RPL35A-201ENST00000329092 NCAPD3P42695 1498 aa11.56□□□□□ -0.56
RPL35A-201ENST00000329092 NPM3O75607 178 aaKnown RBP11.53□□□□□ -0.56
RPL35A-201ENST00000329092 NESP48681 1621 aa11.53□□□□□ -0.56
RPL35A-201ENST00000329092 ATAD2BQ9ULI0 1458 aa11.51□□□□□ -0.57
RPL35A-201ENST00000329092 KCNA4P22459 653 aa11.49□□□□□ -0.57
RPL35A-201ENST00000329092 TRIM41Q8WV44 630 aa11.4□□□□□ -0.58
RPL35A-201ENST00000329092 SMARCA4P51532 1647 aa11.37□□□□□ -0.59
RPL35A-201ENST00000329092 SMARCA2P51531 1590 aa11.37□□□□□ -0.59
RPL35A-201ENST00000329092 HMGXB3Q12766 1538 aa11.36□□□□□ -0.59
RPL35A-201ENST00000329092 THOC2Q8NI27 1593 aaKnown RBP11.33□□□□□ -0.6
RPL35A-201ENST00000329092 BAZ1BQ9UIG0 1483 aaKnown RBP11.33□□□□□ -0.6
RPL35A-201ENST00000329092 MROH2BQ7Z745 1585 aa11.27□□□□□ -0.61
RPL35A-201ENST00000329092 BAZ1AQ9NRL2 1556 aaPredicted RBP11.26□□□□□ -0.61
RPL35A-201ENST00000329092 LAMC3Q9Y6N6 1575 aa11.25□□□□□ -0.61
RPL35A-201ENST00000329092 PDS5BQ9NTI5 1447 aa11.25□□□□□ -0.61
RPL35A-201ENST00000329092 PEG3Q9GZU2 1588 aa11.24□□□□□ -0.61
RPL35A-201ENST00000329092 KIF21AQ7Z4S6 1674 aa11.24□□□□□ -0.61
RPL35A-201ENST00000329092 CADPSQ9ULU8 1353 aa11.22□□□□□ -0.61
RPL35A-201ENST00000329092 RNF39Q9H2S5 420 aa11.21□□□□□ -0.61
RPL35A-201ENST00000329092 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.18□□□□□ -0.623e-6■□□□□ 8.6
RPL35A-201ENST00000329092 CACNB1Q02641 598 aaPredicted RBP11.17□□□□□ -0.62
RPL35A-201ENST00000329092 MRC2Q9UBG0 1479 aa11.16□□□□□ -0.62
RPL35A-201ENST00000329092 OSCARQ8IYS5 282 aa11.13□□□□□ -0.63
RPL35A-201ENST00000329092 WDR62O43379 1518 aa11.13□□□□□ -0.63
RPL35A-201ENST00000329092 WIZO95785 1651 aa11.09□□□□□ -0.63
RPL35A-201ENST00000329092 C1QBPQ07021 282 aaKnown RBP11.07□□□□□ -0.64
RPL35A-201ENST00000329092 FANCD2Q9BXW9 1451 aa11.06□□□□□ -0.64
RPL35A-201ENST00000329092 CEP164Q9UPV0 1460 aa11.06□□□□□ -0.64
RPL35A-201ENST00000329092 CFTRP13569 1480 aa11.02□□□□□ -0.65
RPL35A-201ENST00000329092 URB2Q14146 1524 aaKnown RBP11.02□□□□□ -0.65
RPL35A-201ENST00000329092 ZNF608Q9ULD9 1512 aaPredicted RBP10.96□□□□□ -0.65
RPL35A-201ENST00000329092 RSF1Q96T23 1441 aaPredicted RBP10.96□□□□□ -0.65
RPL35A-201ENST00000329092 RIMBP3CA6NJZ7 1639 aa10.95□□□□□ -0.66
RPL35A-201ENST00000329092 RIMBP3BA6NNM3 1639 aa10.95□□□□□ -0.66
RPL35A-201ENST00000329092 RIMBP3Q9UFD9 1639 aa10.95□□□□□ -0.66
RPL35A-201ENST00000329092 SLC4A2P04920 1241 aa10.94□□□□□ -0.66
RPL35A-201ENST00000329092 CYB5RLQ6IPT4 315 aa10.94□□□□□ -0.66
RPL35A-201ENST00000329092 U3KPZ7 1027 aaPredicted RBP10.93□□□□□ -0.66
RPL35A-201ENST00000329092 SLC4A1APQ9BWU0 796 aaKnown RBP10.91□□□□□ -0.66
RPL35A-201ENST00000329092 ARHGEF11O15085 1522 aa10.9□□□□□ -0.66
RPL35A-201ENST00000329092 TOP2AP11388 1531 aaKnown RBP10.87□□□□□ -0.67
RPL35A-201ENST00000329092 TRHP20396 242 aaPredicted RBP10.86□□□□□ -0.67
RPL35A-201ENST00000329092 IFT140Q96RY7 1462 aa10.86□□□□□ -0.67
RPL35A-201ENST00000329092 CCDC88BA6NC98 1476 aa10.85□□□□□ -0.67
RPL35A-201ENST00000329092 AQRO60306 1485 aaKnown RBP eCLIP10.84□□□□□ -0.671e-7■■■■■ 32.4
RPL35A-201ENST00000329092 TOPBP1Q92547 1522 aa10.83□□□□□ -0.68
RPL35A-201ENST00000329092 FBLN2P98095 1184 aa10.82□□□□□ -0.68
RPL35A-201ENST00000329092 ARAP1Q96P48 1450 aa10.81□□□□□ -0.68
RPL35A-201ENST00000329092 EIF4G3O43432 1585 aaKnown RBP10.77□□□□□ -0.69
RPL35A-201ENST00000329092 TDRD9Q8NDG6 1382 aaKnown RBP10.75□□□□□ -0.69
RPL35A-201ENST00000329092 RAD54L2Q9Y4B4 1467 aa10.74□□□□□ -0.69
RPL35A-201ENST00000329092 TARBP1Q13395 1621 aaKnown RBP10.73□□□□□ -0.69
RPL35A-201ENST00000329092 CAPN15O75808 1086 aa10.73□□□□□ -0.69
RPL35A-201ENST00000329092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.72□□□□□ -0.69
RPL35A-201ENST00000329092 HNRNPUL2Q1KMD3 747 aaKnown RBP10.72□□□□□ -0.69
RPL35A-201ENST00000329092 SPINK5Q9NQ38 1064 aaPredicted RBP10.72□□□□□ -0.69
RPL35A-201ENST00000329092 CHD1O14646 1710 aa10.72□□□□□ -0.69
RPL35A-201ENST00000329092 POLA1P09884 1462 aaPredicted RBP10.71□□□□□ -0.69
RPL35A-201ENST00000329092 DNMBPQ6XZF7 1577 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms