RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 AEBP2Q6ZN18 517 aaPredicted RBP10.82□□□□□ -0.68
SHANK2-216ENST00000482659 NISCHQ9Y2I1 1504 aa10.7□□□□□ -0.7
SHANK2-216ENST00000482659 CHIC1Q5VXU3 224 aa10.6□□□□□ -0.71
SHANK2-216ENST00000482659 CCDC180Q9P1Z9 1646 aa9.38□□□□□ -0.91
SHANK2-216ENST00000482659 PHF23Q9BUL5 403 aaPredicted RBP9.32□□□□□ -0.92
SHANK2-216ENST00000482659 ABCC9O60706 1549 aa9.22□□□□□ -0.93
SHANK2-216ENST00000482659 SENP3Q9H4L4 574 aaPredicted RBP9.16□□□□□ -0.94
SHANK2-216ENST00000482659 DCAF8L2P0C7V8 631 aa9.04□□□□□ -0.96
SHANK2-216ENST00000482659 MYO15BQ96JP2 1530 aa8.92□□□□□ -0.98
SHANK2-216ENST00000482659 NACADO15069 1562 aa8.91□□□□□ -0.98
SHANK2-216ENST00000482659 ZCCHC6Q5VYS8 1495 aaKnown RBP8.9□□□□□ -0.98
SHANK2-216ENST00000482659 RB1CC1Q8TDY2 1594 aa8.89□□□□□ -0.99
SHANK2-216ENST00000482659 DCAF1Q9Y4B6 1507 aa8.88□□□□□ -0.99
SHANK2-216ENST00000482659 PABPN1Q86U42 306 aaKnown RBP eCLIP8.7□□□□□ -1.02
SHANK2-216ENST00000482659 PLPPR3Q6T4P5 718 aa8.63□□□□□ -1.03
SHANK2-216ENST00000482659 SHROOM4Q9ULL8 1493 aa8.59□□□□□ -1.03
SHANK2-216ENST00000482659 SCRIBQ14160 1630 aa8.58□□□□□ -1.04
SHANK2-216ENST00000482659 BICRAQ9NZM4 1560 aa8.54□□□□□ -1.04
SHANK2-216ENST00000482659 FOXD1Q16676 465 aa8.5□□□□□ -1.05
SHANK2-216ENST00000482659 DNAJC5BQ9UF47 199 aa8.44□□□□□ -1.06
SHANK2-216ENST00000482659 UNC13AQ9UPW8 1703 aa8.42□□□□□ -1.06
SHANK2-216ENST00000482659 EIF4G1Q04637 1599 aaKnown RBP8.36□□□□□ -1.07
SHANK2-216ENST00000482659 CECR2Q9BXF3 1484 aa8.31□□□□□ -1.08
SHANK2-216ENST00000482659 BAZ1AQ9NRL2 1556 aaPredicted RBP8.3□□□□□ -1.08
SHANK2-216ENST00000482659 NCAPD3P42695 1498 aa8.28□□□□□ -1.08
SHANK2-216ENST00000482659 CC2D2AQ9P2K1 1620 aa8.28□□□□□ -1.08
SHANK2-216ENST00000482659 ATAD2BQ9ULI0 1458 aa8.26□□□□□ -1.09
SHANK2-216ENST00000482659 SMARCA2P51531 1590 aa8.23□□□□□ -1.09
SHANK2-216ENST00000482659 PPP6R1Q9UPN7 881 aa8.22□□□□□ -1.09
SHANK2-216ENST00000482659 MROH2BQ7Z745 1585 aa8.22□□□□□ -1.09
SHANK2-216ENST00000482659 SMARCA4P51532 1647 aa8.21□□□□□ -1.09
SHANK2-216ENST00000482659 RSF1Q96T23 1441 aaPredicted RBP8.21□□□□□ -1.09
SHANK2-216ENST00000482659 ADRA2BP18089 450 aa8.2□□□□□ -1.1
SHANK2-216ENST00000482659 BAZ1BQ9UIG0 1483 aaKnown RBP8.19□□□□□ -1.1
SHANK2-216ENST00000482659 PEG3Q9GZU2 1588 aa8.18□□□□□ -1.1
SHANK2-216ENST00000482659 HMGXB3Q12766 1538 aa8.16□□□□□ -1.1
SHANK2-216ENST00000482659 SUPT5HO00267 1087 aaKnown RBP8.09□□□□□ -1.11
SHANK2-216ENST00000482659 CADPSQ9ULU8 1353 aa8.06□□□□□ -1.12
SHANK2-216ENST00000482659 TOP2AP11388 1531 aaKnown RBP8.05□□□□□ -1.12
SHANK2-216ENST00000482659 WIZO95785 1651 aa8.05□□□□□ -1.12
SHANK2-216ENST00000482659 PIAS4Q8N2W9 510 aaPredicted RBP8.03□□□□□ -1.12
SHANK2-216ENST00000482659 PDS5BQ9NTI5 1447 aa8.03□□□□□ -1.12
SHANK2-216ENST00000482659 CCDC88BA6NC98 1476 aa8□□□□□ -1.13
SHANK2-216ENST00000482659 ERCC6Q03468 1493 aa8□□□□□ -1.13
SHANK2-216ENST00000482659 CFTRP13569 1480 aa7.99□□□□□ -1.13
SHANK2-216ENST00000482659 LAMC3Q9Y6N6 1575 aa7.97□□□□□ -1.13
SHANK2-216ENST00000482659 NESP48681 1621 aa7.96□□□□□ -1.14
SHANK2-216ENST00000482659 FANCD2Q9BXW9 1451 aa7.92□□□□□ -1.14
SHANK2-216ENST00000482659 CEP164Q9UPV0 1460 aa7.9□□□□□ -1.14
SHANK2-216ENST00000482659 CUX2O14529 1486 aa7.88□□□□□ -1.15
SHANK2-216ENST00000482659 MRC2Q9UBG0 1479 aa7.87□□□□□ -1.15
SHANK2-216ENST00000482659 ABCC8Q09428 1581 aa7.85□□□□□ -1.15
SHANK2-216ENST00000482659 MSH5O43196 834 aa7.83□□□□□ -1.16
SHANK2-216ENST00000482659 WDR62O43379 1518 aa7.8□□□□□ -1.16
SHANK2-216ENST00000482659 URB2Q14146 1524 aaKnown RBP7.78□□□□□ -1.16
SHANK2-216ENST00000482659 THOC2Q8NI27 1593 aaKnown RBP7.76□□□□□ -1.17
SHANK2-216ENST00000482659 TOPBP1Q92547 1522 aa7.76□□□□□ -1.17
SHANK2-216ENST00000482659 WRNQ14191 1432 aaPredicted RBP eCLIP7.76□□□□□ -1.17
SHANK2-216ENST00000482659 IFT140Q96RY7 1462 aa7.75□□□□□ -1.17
SHANK2-216ENST00000482659 SOGA1O94964 1423 aa7.75□□□□□ -1.17
SHANK2-216ENST00000482659 DNMBPQ6XZF7 1577 aa7.74□□□□□ -1.17
SHANK2-216ENST00000482659 KIF21AQ7Z4S6 1674 aa7.73□□□□□ -1.17
SHANK2-216ENST00000482659 POLA1P09884 1462 aaPredicted RBP7.7□□□□□ -1.18
SHANK2-216ENST00000482659 CUX1P39880 1505 aa7.7□□□□□ -1.18
SHANK2-216ENST00000482659 FGD5Q6ZNL6 1462 aa7.69□□□□□ -1.18
SHANK2-216ENST00000482659 TRIM41Q8WV44 630 aa7.69□□□□□ -1.18
SHANK2-216ENST00000482659 TDRD9Q8NDG6 1382 aaKnown RBP7.69□□□□□ -1.18
SHANK2-216ENST00000482659 RAD54L2Q9Y4B4 1467 aa7.67□□□□□ -1.18
SHANK2-216ENST00000482659 OSCARQ8IYS5 282 aa7.66□□□□□ -1.18
SHANK2-216ENST00000482659 AQRO60306 1485 aaKnown RBP eCLIP7.65□□□□□ -1.18
SHANK2-216ENST00000482659 PRDM2Q13029 1718 aa7.65□□□□□ -1.18
SHANK2-216ENST00000482659 ZNF608Q9ULD9 1512 aaPredicted RBP7.65□□□□□ -1.18
SHANK2-216ENST00000482659 ABCA10Q8WWZ4 1543 aa7.64□□□□□ -1.19
SHANK2-216ENST00000482659 CHMP7Q8WUX9 453 aaPredicted RBP7.64□□□□□ -1.19
SHANK2-216ENST00000482659 DNAJC5Q9H3Z4 198 aa7.64□□□□□ -1.19
SHANK2-216ENST00000482659 TOP2BQ02880 1626 aa7.63□□□□□ -1.19
SHANK2-216ENST00000482659 FBLN2P98095 1184 aa7.63□□□□□ -1.19
SHANK2-216ENST00000482659 GRIN2BQ13224 1484 aa7.62□□□□□ -1.19
SHANK2-216ENST00000482659 GAPVD1Q14C86 1478 aa7.62□□□□□ -1.19
SHANK2-216ENST00000482659 KIF27Q86VH2 1401 aa7.62□□□□□ -1.19
SHANK2-216ENST00000482659 WDR97A6NE52 1622 aa7.61□□□□□ -1.19
SHANK2-216ENST00000482659 TARBP1Q13395 1621 aaKnown RBP7.6□□□□□ -1.19
SHANK2-216ENST00000482659 SYNJ1O43426 1573 aa7.6□□□□□ -1.19
SHANK2-216ENST00000482659 PPP4R3CPQ6ZMV5 832 aa7.6□□□□□ -1.19
SHANK2-216ENST00000482659 MAGI1Q96QZ7 1491 aaPredicted RBP7.59□□□□□ -1.19
SHANK2-216ENST00000482659 BIVM-ERCC5R4GMW8 1640 aa7.58□□□□□ -1.2
SHANK2-216ENST00000482659 IGF1RP08069 1367 aa7.58□□□□□ -1.2
SHANK2-216ENST00000482659 FHAD1B1AJZ9 1412 aa7.57□□□□□ -1.2
SHANK2-216ENST00000482659 SNAPC4Q5SXM2 1469 aa7.56□□□□□ -1.2
SHANK2-216ENST00000482659 SYNJ2O15056 1496 aa7.55□□□□□ -1.2
SHANK2-216ENST00000482659 EIF4G3O43432 1585 aaKnown RBP7.55□□□□□ -1.2
SHANK2-216ENST00000482659 ERICH3Q5RHP9 1530 aa7.54□□□□□ -1.2
SHANK2-216ENST00000482659 CSRNP3Q8WYN3 585 aa7.54□□□□□ -1.2
SHANK2-216ENST00000482659 CARMIL1Q5VZK9 1371 aa7.54□□□□□ -1.2
SHANK2-216ENST00000482659 EEA1Q15075 1411 aa7.53□□□□□ -1.2
SHANK2-216ENST00000482659 SCAF1Q9H7N4 1312 aaKnown RBP7.52□□□□□ -1.21
SHANK2-216ENST00000482659 ABCA5Q8WWZ7 1642 aa7.51□□□□□ -1.21
SHANK2-216ENST00000482659 GRIN2AQ12879 1464 aa7.49□□□□□ -1.21
SHANK2-216ENST00000482659 JPH4Q96JJ6 628 aa7.49□□□□□ -1.21
SHANK2-216ENST00000482659 NUP160Q12769 1436 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms