Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH20Q9HBT6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH20Q9HBT6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH20Q9HBT6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH20Q9HBT6 GPX1P1-201ENST00000388829 606 ntBASIC17.77■□□□□ 0.44
CDH20Q9HBT6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.77■□□□□ 0.44
CDH20Q9HBT6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH20Q9HBT6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
CDH20Q9HBT6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH20Q9HBT6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CDH20Q9HBT6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH20Q9HBT6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 MCRIP2P1-201ENST00000394346 511 ntBASIC17.76■□□□□ 0.43
CDH20Q9HBT6 SLC29A4P1-201ENST00000398760 971 ntBASIC17.76■□□□□ 0.43
CDH20Q9HBT6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 AL512625.2-201ENST00000417533 625 ntBASIC17.76■□□□□ 0.43
CDH20Q9HBT6 AC083906.2-201ENST00000511578 360 ntBASIC17.76■□□□□ 0.43
CDH20Q9HBT6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 AC100791.3-201ENST00000617619 330 ntBASIC17.76■□□□□ 0.43
CDH20Q9HBT6 MKRN4P-201ENST00000444706 1521 ntBASIC17.76■□□□□ 0.43
CDH20Q9HBT6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH20Q9HBT6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 AC093787.1-201ENST00000450396 207 ntBASIC17.75■□□□□ 0.43
CDH20Q9HBT6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 AC027702.1-201ENST00000563810 1770 ntBASIC17.75■□□□□ 0.43
CDH20Q9HBT6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH20Q9HBT6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 AC010980.2-201ENST00000587099 1412 ntBASIC17.74■□□□□ 0.43
CDH20Q9HBT6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 NCF1B-203ENST00000435988 1254 ntBASIC17.74■□□□□ 0.43
CDH20Q9HBT6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 CYP21A1P-202ENST00000354927 1481 ntBASIC17.74■□□□□ 0.43
CDH20Q9HBT6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH20Q9HBT6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH20Q9HBT6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH20Q9HBT6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms