Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 DUF1YOL087C 3351 nt3.05□□□□□ -1.92
SSL1Q04673 PSK2YOL045W 3306 nt3.05□□□□□ -1.92
SSL1Q04673 RSE1YML049C 4086 nt3.05□□□□□ -1.92
SSL1Q04673 VPS64YDR200C 1815 nt3.05□□□□□ -1.92
SSL1Q04673 YER189WYER189W 369 nt3.04□□□□□ -1.92
SSL1Q04673 AYR1YIL124W 894 nt3.04□□□□□ -1.92
SSL1Q04673 GPI14YJR013W 1212 nt3.04□□□□□ -1.92
SSL1Q04673 RRM3YHR031C 2172 nt3.03□□□□□ -1.92
SSL1Q04673 YER121WYER121W 345 nt3.03□□□□□ -1.92
SSL1Q04673 tQ(UUG)BtQ(UUG)B 72 nt3.03□□□□□ -1.92
SSL1Q04673 RPN1YHR027C 2982 nt3.03□□□□□ -1.92
SSL1Q04673 YLR294CYLR294C 330 nt3.03□□□□□ -1.92
SSL1Q04673 YBL065WYBL065W 345 nt3.03□□□□□ -1.92
SSL1Q04673 RPS12YOR369C 432 nt3.03□□□□□ -1.92
SSL1Q04673 YPR146CYPR146C 330 nt3.03□□□□□ -1.92
SSL1Q04673 BUB1YGR188C 3066 nt3.03□□□□□ -1.92
SSL1Q04673 RIX1YHR197W 2292 nt3.03□□□□□ -1.92
SSL1Q04673 SPO14YKR031C 5052 nt3.02□□□□□ -1.93
SSL1Q04673 POL2YNL262W 6669 nt3.02□□□□□ -1.93
SSL1Q04673 TRM2YKR056W 1920 nt3.02□□□□□ -1.93
SSL1Q04673 snR80snR80 171 nt3.02□□□□□ -1.93
SSL1Q04673 CDC36YDL165W 576 nt3.02□□□□□ -1.93
SSL1Q04673 USE1YGL098W 738 nt3.02□□□□□ -1.93
SSL1Q04673 YGL239CYGL239C 315 nt3.02□□□□□ -1.93
SSL1Q04673 YGR069WYGR069W 336 nt3.02□□□□□ -1.93
SSL1Q04673 TIM13YGR181W 318 nt3.02□□□□□ -1.93
SSL1Q04673 YIL066W-AYIL066W-A 444 nt3.02□□□□□ -1.93
SSL1Q04673 IKI3YLR384C 4050 nt3.02□□□□□ -1.93
SSL1Q04673 BAS1YKR099W 2436 nt3.02□□□□□ -1.93
SSL1Q04673 FLO1YAR050W 4614 nt3.02□□□□□ -1.93
SSL1Q04673 SNQ2YDR011W 4506 nt3.01□□□□□ -1.93
SSL1Q04673 FRE2YKL220C 2136 nt3.01□□□□□ -1.93
SSL1Q04673 PSK1YAL017W 4071 nt3.01□□□□□ -1.93
SSL1Q04673 YOL057WYOL057W 2136 nt3.01□□□□□ -1.93
SSL1Q04673 AI2Q0055 2565 nt3.01□□□□□ -1.93
SSL1Q04673 RSN1YMR266W 2862 nt3□□□□□ -1.93
SSL1Q04673 PSO2YMR137C 1986 nt3□□□□□ -1.93
SSL1Q04673 POL3YDL102W 3294 nt3□□□□□ -1.93
SSL1Q04673 RAM2YKL019W 951 nt3□□□□□ -1.93
SSL1Q04673 HTB2YBL002W 396 nt3□□□□□ -1.93
SSL1Q04673 SMA2YML066C 1110 nt3□□□□□ -1.93
SSL1Q04673 BMS1YPL217C 3552 nt2.99□□□□□ -1.93
SSL1Q04673 DRS2YAL026C 4068 nt2.99□□□□□ -1.93
SSL1Q04673 CSN9YDR179C 489 nt2.99□□□□□ -1.93
SSL1Q04673 RPL40AYIL148W 387 nt2.99□□□□□ -1.93
SSL1Q04673 CHS2YBR038W 2892 nt2.98□□□□□ -1.93
SSL1Q04673 TIM11YDR322C-A 291 nt2.98□□□□□ -1.93
SSL1Q04673 RPL32YBL092W 393 nt2.98□□□□□ -1.93
SSL1Q04673 snR49snR49 165 nt2.98□□□□□ -1.93
SSL1Q04673 TAO3YIL129C 7131 nt2.98□□□□□ -1.93
SSL1Q04673 PUF6YDR496C 1971 nt2.98□□□□□ -1.93
SSL1Q04673 RGC1YPR115W 3252 nt2.97□□□□□ -1.93
SSL1Q04673 YNL010WYNL010W 726 nt2.97□□□□□ -1.93
SSL1Q04673 MF(ALPHA)1YPL187W 498 nt2.97□□□□□ -1.93
SSL1Q04673 DAD3YBR233W-A 285 nt2.97□□□□□ -1.93
SSL1Q04673 PAC1YOR269W 1485 nt2.96□□□□□ -1.93
SSL1Q04673 GCD6YDR211W 2139 nt2.96□□□□□ -1.93
SSL1Q04673 NPR3YHL023C 3441 nt2.96□□□□□ -1.94
SSL1Q04673 DYN1YKR054C 12279 nt2.96□□□□□ -1.94
SSL1Q04673 DSE4YNR067C 3354 nt2.96□□□□□ -1.94
SSL1Q04673 YDR048CYDR048C 315 nt2.96□□□□□ -1.94
SSL1Q04673 RPS27AYKL156W 249 nt2.96□□□□□ -1.94
SSL1Q04673 YOR008C-AYOR008C-A 225 nt2.96□□□□□ -1.94
SSL1Q04673 ITC1YGL133W 3795 nt2.96□□□□□ -1.94
SSL1Q04673 FUN30YAL019W 3396 nt2.96□□□□□ -1.94
SSL1Q04673 YIL082W-AYIL082W-A 4497 nt2.96□□□□□ -1.94
SSL1Q04673 ORC1YML065W 2745 nt2.96□□□□□ -1.94
SSL1Q04673 GIN4YDR507C 3429 nt2.96□□□□□ -1.94
SSL1Q04673 MDM1YML104C 3384 nt2.95□□□□□ -1.94
SSL1Q04673 ARP7YPR034W 1434 nt2.95□□□□□ -1.94
SSL1Q04673 PUF4YGL014W 2667 nt2.95□□□□□ -1.94
SSL1Q04673 YJL222W-BYJL222W-B 138 nt2.95□□□□□ -1.94
SSL1Q04673 SDH2YLL041C 801 nt2.95□□□□□ -1.94
SSL1Q04673 YMR324CYMR324C 243 nt2.95□□□□□ -1.94
SSL1Q04673 RPL36BYPL249C-A 303 nt2.95□□□□□ -1.94
SSL1Q04673 CDC20YGL116W 1833 nt2.95□□□□□ -1.94
SSL1Q04673 DYN2YDR424C 279 nt2.94□□□□□ -1.94
SSL1Q04673 ALG13YGL047W 609 nt2.94□□□□□ -1.94
SSL1Q04673 YOR296WYOR296W 3870 nt2.94□□□□□ -1.94
SSL1Q04673 DIS3YOL021C 3006 nt2.94□□□□□ -1.94
SSL1Q04673 DBP6YNR038W 1890 nt2.94□□□□□ -1.94
SSL1Q04673 HEH2YDR458C 1992 nt2.94□□□□□ -1.94
SSL1Q04673 REV3YPL167C 4515 nt2.93□□□□□ -1.94
SSL1Q04673 MET5YJR137C 4329 nt2.93□□□□□ -1.94
SSL1Q04673 YFH1YDL120W 525 nt2.93□□□□□ -1.94
SSL1Q04673 YIL102CYIL102C 306 nt2.93□□□□□ -1.94
SSL1Q04673 ABF2YMR072W 552 nt2.93□□□□□ -1.94
SSL1Q04673 YMR307C-AYMR307C-A 195 nt2.93□□□□□ -1.94
SSL1Q04673 RPL25YOL127W 429 nt2.93□□□□□ -1.94
SSL1Q04673 YBR197CYBR197C 654 nt2.93□□□□□ -1.94
SSL1Q04673 NMD2YHR077C 3270 nt2.93□□□□□ -1.94
SSL1Q04673 ASG1YIL130W 2895 nt2.93□□□□□ -1.94
SSL1Q04673 CSR2YPR030W 3366 nt2.92□□□□□ -1.94
SSL1Q04673 YGL024WYGL024W 336 nt2.92□□□□□ -1.94
SSL1Q04673 LSO2YGR169C-A 279 nt2.92□□□□□ -1.94
SSL1Q04673 YHL042WYHL042W 453 nt2.92□□□□□ -1.94
SSL1Q04673 YJL197C-AYJL197C-A 282 nt2.92□□□□□ -1.94
SSL1Q04673 COX14YML129C 213 nt2.92□□□□□ -1.94
SSL1Q04673 YBR121C-AYBR121C-A 159 nt2.92□□□□□ -1.94
SSL1Q04673 KAR3YPR141C 2190 nt2.92□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 45.9 ms