Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 snR49snR49 165 nt3.19□□□□□ -1.9
NPL3Q01560 DOA4YDR069C 2781 nt3.18□□□□□ -1.9
NPL3Q01560 snR79snR79 84 nt3.18□□□□□ -1.9
NPL3Q01560 snR85snR85 171 nt3.18□□□□□ -1.9
NPL3Q01560 WIP1YDR374W-A 270 nt3.18□□□□□ -1.9
NPL3Q01560 YIL020C-AYIL020C-A 339 nt3.18□□□□□ -1.9
NPL3Q01560 AYR1YIL124W 894 nt3.18□□□□□ -1.9
NPL3Q01560 RPS21AYKR057W 264 nt3.18□□□□□ -1.9
NPL3Q01560 IES4YOR189W 351 nt3.18□□□□□ -1.9 RIP-Chip
NPL3Q01560 SNT1YCR033W 3681 nt3.18□□□□□ -1.9
NPL3Q01560 ARP7YPR034W 1434 nt3.18□□□□□ -1.9
NPL3Q01560 YMR317WYMR317W 3423 nt3.18□□□□□ -1.9
NPL3Q01560 PKH1YDR490C 2301 nt3.18□□□□□ -1.9
NPL3Q01560 NAN1YPL126W 2691 nt3.17□□□□□ -1.9
NPL3Q01560 PFK26YIL107C 2484 nt3.17□□□□□ -1.9
NPL3Q01560 snR76snR76 109 nt3.17□□□□□ -1.9
NPL3Q01560 SDH2YLL041C 801 nt3.17□□□□□ -1.9 RIP-Chip
NPL3Q01560 COA4YLR218C 453 nt3.17□□□□□ -1.9 RIP-Chip
NPL3Q01560 DAD3YBR233W-A 285 nt3.17□□□□□ -1.9
NPL3Q01560 YHR080CYHR080C 4038 nt3.16□□□□□ -1.9
NPL3Q01560 PCF11YDR228C 1881 nt3.16□□□□□ -1.9
NPL3Q01560 RPL40AYIL148W 387 nt3.16□□□□□ -1.9
NPL3Q01560 PSY1YKL076C 384 nt3.16□□□□□ -1.9
NPL3Q01560 RPL25YOL127W 429 nt3.16□□□□□ -1.9
NPL3Q01560 YBR197CYBR197C 654 nt3.16□□□□□ -1.9 RIP-Chip
NPL3Q01560 POL3YDL102W 3294 nt3.16□□□□□ -1.9
NPL3Q01560 NET1YJL076W 3570 nt3.16□□□□□ -1.9
NPL3Q01560 RGR1YLR071C 3249 nt3.15□□□□□ -1.9
NPL3Q01560 BUD4YJR092W 4344 nt3.15□□□□□ -1.9
NPL3Q01560 VPS41YDR080W 2979 nt3.15□□□□□ -1.9
NPL3Q01560 MBB1YJL199C 327 nt3.15□□□□□ -1.91
NPL3Q01560 PHD1YKL043W 1101 nt3.15□□□□□ -1.91
NPL3Q01560 YOL155W-AYOL155W-A 135 nt3.15□□□□□ -1.91
NPL3Q01560 ASG1YIL130W 2895 nt3.15□□□□□ -1.91
NPL3Q01560 CHO2YGR157W 2610 nt3.14□□□□□ -1.91
NPL3Q01560 BCH1YMR237W 2175 nt3.14□□□□□ -1.91
NPL3Q01560 YPL182CYPL182C 384 nt3.14□□□□□ -1.91
NPL3Q01560 CDC24YAL041W 2565 nt3.14□□□□□ -1.91
NPL3Q01560 YOR296WYOR296W 3870 nt3.14□□□□□ -1.91
NPL3Q01560 DRS2YAL026C 4068 nt3.14□□□□□ -1.91
NPL3Q01560 STE6YKL209C 3873 nt3.13□□□□□ -1.91
NPL3Q01560 RKM1YPL208W 1752 nt3.13□□□□□ -1.91
NPL3Q01560 YDL011CYDL011C 324 nt3.13□□□□□ -1.91
NPL3Q01560 RPL26AYLR344W 384 nt3.13□□□□□ -1.91
NPL3Q01560 RGM1YMR182C 636 nt3.13□□□□□ -1.91
NPL3Q01560 YNL010WYNL010W 726 nt3.13□□□□□ -1.91
NPL3Q01560 REV1YOR346W 2958 nt3.13□□□□□ -1.91
NPL3Q01560 DNL4YOR005C 2835 nt3.13□□□□□ -1.91 RIP-Chip
NPL3Q01560 PUF6YDR496C 1971 nt3.12□□□□□ -1.91 RIP-Chip
NPL3Q01560 VTC4YJL012C 2166 nt3.12□□□□□ -1.91
NPL3Q01560 HCS1YKL017C 2052 nt3.12□□□□□ -1.91
NPL3Q01560 RPA190YOR341W 4995 nt3.12□□□□□ -1.91
NPL3Q01560 MZM1YDR493W 372 nt3.11□□□□□ -1.91 RIP-Chip
NPL3Q01560 YER121WYER121W 345 nt3.11□□□□□ -1.91
NPL3Q01560 YLR012CYLR012C 300 nt3.11□□□□□ -1.91
NPL3Q01560 TAR1YLR154W-C 375 nt3.11□□□□□ -1.91
NPL3Q01560 YPR146CYPR146C 330 nt3.11□□□□□ -1.91
NPL3Q01560 VPS64YDR200C 1815 nt3.11□□□□□ -1.91
NPL3Q01560 NAB3YPL190C 2409 nt3.11□□□□□ -1.91
NPL3Q01560 IKI3YLR384C 4050 nt3.11□□□□□ -1.91
NPL3Q01560 MCD1YDL003W 1701 nt3.1□□□□□ -1.91
NPL3Q01560 ORC1YML065W 2745 nt3.1□□□□□ -1.91
NPL3Q01560 YDL062WYDL062W 426 nt3.1□□□□□ -1.91
NPL3Q01560 YFH1YDL120W 525 nt3.1□□□□□ -1.91 RIP-Chip
NPL3Q01560 YBL065WYBL065W 345 nt3.1□□□□□ -1.91
NPL3Q01560 TRS65YGR166W 1683 nt3.1□□□□□ -1.91
NPL3Q01560 PRK1YIL095W 2433 nt3.1□□□□□ -1.91
NPL3Q01560 RPN1YHR027C 2982 nt3.09□□□□□ -1.91
NPL3Q01560 GIS4YML006C 2325 nt3.09□□□□□ -1.91
NPL3Q01560 RIF1YBR275C 5751 nt3.09□□□□□ -1.91
NPL3Q01560 ROG1YGL144C 2058 nt3.09□□□□□ -1.91
NPL3Q01560 TCP1YDR212W 1680 nt3.09□□□□□ -1.91
NPL3Q01560 YDL185C-AYDL185C-A 228 nt3.09□□□□□ -1.91
NPL3Q01560 RPL35AYDL191W 363 nt3.09□□□□□ -1.91 RIP-Chip
NPL3Q01560 YMR324CYMR324C 243 nt3.09□□□□□ -1.91
NPL3Q01560 YOR050CYOR050C 348 nt3.09□□□□□ -1.91
NPL3Q01560 DBP7YKR024C 2229 nt3.09□□□□□ -1.91
NPL3Q01560 OSW7YFR039C 1533 nt3.09□□□□□ -1.92
NPL3Q01560 SDH6YDR379C-A 240 nt3.08□□□□□ -1.92 RIP-Chip
NPL3Q01560 YEL020C-BYEL020C-B 198 nt3.08□□□□□ -1.92
NPL3Q01560 ALG13YGL047W 609 nt3.08□□□□□ -1.92 RIP-Chip
NPL3Q01560 MDM1YML104C 3384 nt3.08□□□□□ -1.92
NPL3Q01560 GIN4YDR507C 3429 nt3.07□□□□□ -1.92
NPL3Q01560 KSP1YHR082C 3090 nt3.07□□□□□ -1.92
NPL3Q01560 PRP8YHR165C 7242 nt3.07□□□□□ -1.92
NPL3Q01560 DAD4YDR320C-A 219 nt3.07□□□□□ -1.92 RIP-Chip
NPL3Q01560 YGL014C-AYGL014C-A 162 nt3.07□□□□□ -1.92
NPL3Q01560 YGR174W-AYGR174W-A 87 nt3.07□□□□□ -1.92
NPL3Q01560 RPS28BYLR264W 204 nt3.07□□□□□ -1.92
NPL3Q01560 RAD61YDR014W 1944 nt3.07□□□□□ -1.92
NPL3Q01560 DBP10YDL031W 2988 nt3.06□□□□□ -1.92
NPL3Q01560 FLO1YAR050W 4614 nt3.06□□□□□ -1.92
NPL3Q01560 RPS24AYER074W 408 nt3.06□□□□□ -1.92
NPL3Q01560 PHS1YJL097W 654 nt3.06□□□□□ -1.92 RIP-Chip
NPL3Q01560 YAL059C-AYAL059C-A 423 nt3.06□□□□□ -1.92
NPL3Q01560 YKR033CYKR033C 426 nt3.06□□□□□ -1.92
NPL3Q01560 YPR089WYPR089W 2667 nt3.06□□□□□ -1.92
NPL3Q01560 SIN3YOL004W 4611 nt3.05□□□□□ -1.92
NPL3Q01560 CIN8YEL061C 3003 nt3.05□□□□□ -1.92
NPL3Q01560 DUG2YBR281C 2637 nt3.05□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 40.1 ms