Protein–RNA interactions for Protein: P53969

SAM50, Sorting assembly machinery 50 kDa subunit, yeastyeast

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SAM50P53969 YBR197CYBR197C 654 nt2.31□□□□□ -2.04
SAM50P53969 DNF1YER166W 4716 nt2.31□□□□□ -2.04
SAM50P53969 KEL2YGR238C 2649 nt2.3□□□□□ -2.04
SAM50P53969 SRO77YBL106C 3033 nt2.3□□□□□ -2.04
SAM50P53969 YER137W-AYER137W-A 306 nt2.3□□□□□ -2.04
SAM50P53969 FPR1YNL135C 345 nt2.3□□□□□ -2.04
SAM50P53969 YPR197CYPR197C 564 nt2.3□□□□□ -2.04
SAM50P53969 COX1Q0045 1605 nt2.3□□□□□ -2.04
SAM50P53969 tC(GCA)BtC(GCA)B 72 nt2.29□□□□□ -2.04
SAM50P53969 tC(GCA)GtC(GCA)G 72 nt2.29□□□□□ -2.04
SAM50P53969 tC(GCA)P1tC(GCA)P1 72 nt2.29□□□□□ -2.04
SAM50P53969 tC(GCA)P2tC(GCA)P2 72 nt2.29□□□□□ -2.04
SAM50P53969 CAJ1YER048C 1176 nt2.29□□□□□ -2.04
SAM50P53969 YER076W-AYER076W-A 348 nt2.29□□□□□ -2.04
SAM50P53969 MBB1YJL199C 327 nt2.29□□□□□ -2.04
SAM50P53969 YAL042C-AYAL042C-A 378 nt2.29□□□□□ -2.04
SAM50P53969 RPL36AYMR194W 303 nt2.29□□□□□ -2.04
SAM50P53969 AYT1YLL063C 1425 nt2.28□□□□□ -2.04
SAM50P53969 YDL041WYDL041W 354 nt2.28□□□□□ -2.04
SAM50P53969 YDR250CYDR250C 276 nt2.28□□□□□ -2.04
SAM50P53969 YER079C-AYER079C-A 339 nt2.28□□□□□ -2.04
SAM50P53969 URM1YIL008W 300 nt2.28□□□□□ -2.04
SAM50P53969 LCL2YLR104W 396 nt2.28□□□□□ -2.04
SAM50P53969 YDR186CYDR186C 2634 nt2.28□□□□□ -2.04
SAM50P53969 RRP12YPL012W 3687 nt2.28□□□□□ -2.05
SAM50P53969 GNT1YOR320C 1476 nt2.27□□□□□ -2.05
SAM50P53969 VPS64YDR200C 1815 nt2.27□□□□□ -2.05
SAM50P53969 TIM9YEL020W-A 264 nt2.27□□□□□ -2.05
SAM50P53969 MSL5YLR116W 1431 nt2.26□□□□□ -2.05
SAM50P53969 FKS3YMR306W 5358 nt2.26□□□□□ -2.05
SAM50P53969 IRC10YOL015W 1761 nt2.26□□□□□ -2.05
SAM50P53969 PDR1YGL013C 3207 nt2.26□□□□□ -2.05
SAM50P53969 RPS20YHL015W 366 nt2.26□□□□□ -2.05
SAM50P53969 YML003WYML003W 873 nt2.26□□□□□ -2.05
SAM50P53969 YOR146WYOR146W 306 nt2.26□□□□□ -2.05
SAM50P53969 PTP3YER075C 2787 nt2.26□□□□□ -2.05
SAM50P53969 IRA2YOL081W 9240 nt2.25□□□□□ -2.05
SAM50P53969 snR79snR79 84 nt2.25□□□□□ -2.05
SAM50P53969 RTT102YGR275W 474 nt2.25□□□□□ -2.05
SAM50P53969 YMR324CYMR324C 243 nt2.25□□□□□ -2.05
SAM50P53969 YOR121CYOR121C 306 nt2.25□□□□□ -2.05
SAM50P53969 YPR089WYPR089W 2667 nt2.24□□□□□ -2.05
SAM50P53969 YNL018CYNL018C 1839 nt2.24□□□□□ -2.05
SAM50P53969 TOF1YNL273W 3717 nt2.24□□□□□ -2.05
SAM50P53969 YGR035CYGR035C 351 nt2.24□□□□□ -2.05
SAM50P53969 YHR180W-AYHR180W-A 183 nt2.24□□□□□ -2.05
SAM50P53969 AYR1YIL124W 894 nt2.24□□□□□ -2.05
SAM50P53969 YKL165C-AYKL165C-A 234 nt2.24□□□□□ -2.05
SAM50P53969 RNP1YLL046C 750 nt2.24□□□□□ -2.05
SAM50P53969 YBL071CYBL071C 309 nt2.24□□□□□ -2.05
SAM50P53969 YPL238CYPL238C 390 nt2.24□□□□□ -2.05
SAM50P53969 ROX1YPR065W 1107 nt2.24□□□□□ -2.05
SAM50P53969 MSS11YMR164C 2277 nt2.24□□□□□ -2.05
SAM50P53969 MRD1YPR112C 2664 nt2.24□□□□□ -2.05
SAM50P53969 KSP1YHR082C 3090 nt2.23□□□□□ -2.05
SAM50P53969 JIP5YPR169W 1479 nt2.23□□□□□ -2.05
SAM50P53969 YER023C-AYER023C-A 213 nt2.23□□□□□ -2.05
SAM50P53969 YML009C-AYML009C-A 327 nt2.23□□□□□ -2.05
SAM50P53969 LSM7YNL147W 348 nt2.23□□□□□ -2.05
SAM50P53969 YOL159C-AYOL159C-A 273 nt2.23□□□□□ -2.05
SAM50P53969 YJR098CYJR098C 1971 nt2.23□□□□□ -2.05
SAM50P53969 PRP6YBR055C 2700 nt2.23□□□□□ -2.05
SAM50P53969 IPT1YDR072C 1584 nt2.23□□□□□ -2.05
SAM50P53969 MZM1YDR493W 372 nt2.22□□□□□ -2.05
SAM50P53969 YGL014C-AYGL014C-A 162 nt2.22□□□□□ -2.05
SAM50P53969 LSO2YGR169C-A 279 nt2.22□□□□□ -2.05
SAM50P53969 YJR011CYJR011C 786 nt2.22□□□□□ -2.05
SAM50P53969 TMA22YJR014W 597 nt2.22□□□□□ -2.05
SAM50P53969 RPS18BYML026C 441 nt2.22□□□□□ -2.05
SAM50P53969 CRS5YOR031W 210 nt2.22□□□□□ -2.05
SAM50P53969 YOR050CYOR050C 348 nt2.22□□□□□ -2.05
SAM50P53969 ARP8YOR141C 2646 nt2.22□□□□□ -2.05
SAM50P53969 DNA2YHR164C 4569 nt2.22□□□□□ -2.05
SAM50P53969 RSE1YML049C 4086 nt2.22□□□□□ -2.05
SAM50P53969 CDC24YAL041W 2565 nt2.22□□□□□ -2.05
SAM50P53969 AFI1YOR129C 2682 nt2.22□□□□□ -2.05
SAM50P53969 SWT1YOR166C 1377 nt2.22□□□□□ -2.05
SAM50P53969 SDC25YLL016W 3147 nt2.22□□□□□ -2.05
SAM50P53969 SKP2YNL311C 2292 nt2.21□□□□□ -2.06
SAM50P53969 YIL080WYIL080W 4722 nt2.21□□□□□ -2.06
SAM50P53969 YDL025W-AYDL025W-A 105 nt2.21□□□□□ -2.06
SAM50P53969 PRE8YML092C 753 nt2.21□□□□□ -2.06
SAM50P53969 YNL010WYNL010W 726 nt2.21□□□□□ -2.06
SAM50P53969 YBL108WYBL108W 306 nt2.21□□□□□ -2.06
SAM50P53969 MPH1YIR002C 2982 nt2.21□□□□□ -2.06
SAM50P53969 UBP11YKR098C 2154 nt2.2□□□□□ -2.06
SAM50P53969 REV1YOR346W 2958 nt2.2□□□□□ -2.06
SAM50P53969 YJL070CYJL070C 2667 nt2.2□□□□□ -2.06
SAM50P53969 PAU14YIL176C 363 nt2.2□□□□□ -2.06
SAM50P53969 YJL202CYJL202C 348 nt2.2□□□□□ -2.06
SAM50P53969 PAU1YJL223C 363 nt2.2□□□□□ -2.06
SAM50P53969 HRD3YLR207W 2502 nt2.2□□□□□ -2.06
SAM50P53969 PTC5YOR090C 1719 nt2.2□□□□□ -2.06
SAM50P53969 YDL240C-AYDL240C-A 138 nt2.19□□□□□ -2.06
SAM50P53969 YER121WYER121W 345 nt2.19□□□□□ -2.06
SAM50P53969 ACB1YGR037C 264 nt2.19□□□□□ -2.06
SAM50P53969 YGR050CYGR050C 357 nt2.19□□□□□ -2.06
SAM50P53969 YHR032W-AYHR032W-A 180 nt2.19□□□□□ -2.06
SAM50P53969 tW(CCA)G1tW(CCA)G1 72 nt2.19□□□□□ -2.06
SAM50P53969 tW(CCA)G2tW(CCA)G2 72 nt2.19□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 24.5 ms