Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 EPO1YMR124W 2832 nt3.46□□□□□ -1.86
NRD1P53617 SSM4YIL030C 3960 nt3.45□□□□□ -1.86
NRD1P53617 MUS81YDR386W 1899 nt3.45□□□□□ -1.86
NRD1P53617 FKH2YNL068C 2589 nt3.45□□□□□ -1.86
NRD1P53617 RAD54YGL163C 2697 nt3.45□□□□□ -1.86
NRD1P53617 COX23YHR116W 456 nt3.45□□□□□ -1.86
NRD1P53617 tT(UGU)Q1tT(UGU)Q1 76 nt3.45□□□□□ -1.86
NRD1P53617 BAS1YKR099W 2436 nt3.45□□□□□ -1.86
NRD1P53617 IOC2YLR095C 2439 nt3.45□□□□□ -1.86
NRD1P53617 GYL1YMR192W 2163 nt3.45□□□□□ -1.86
NRD1P53617 YAK1YJL141C 2424 nt3.44□□□□□ -1.86
NRD1P53617 SIR3YLR442C 2937 nt3.44□□□□□ -1.86
NRD1P53617 RAD4YER162C 2265 nt3.44□□□□□ -1.86
NRD1P53617 YER091C-AYER091C-A 222 nt3.44□□□□□ -1.86
NRD1P53617 PRP22YER013W 3438 nt3.44□□□□□ -1.86
NRD1P53617 TPS2YDR074W 2691 nt3.43□□□□□ -1.86
NRD1P53617 TFB1YDR311W 1929 nt3.43□□□□□ -1.86
NRD1P53617 STU1YBL034C 4542 nt3.43□□□□□ -1.86
NRD1P53617 SNT1YCR033W 3681 nt3.43□□□□□ -1.86
NRD1P53617 NUP159YIL115C 4383 nt3.42□□□□□ -1.86
NRD1P53617 snR81snR81 201 nt3.42□□□□□ -1.86
NRD1P53617 YDL242WYDL242W 354 nt3.42□□□□□ -1.86
NRD1P53617 YDR286CYDR286C 345 nt3.42□□□□□ -1.86
NRD1P53617 YFR012W-AYFR012W-A 87 nt3.42□□□□□ -1.86
NRD1P53617 COX5BYIL111W 456 nt3.42□□□□□ -1.86
NRD1P53617 CMC4YMR194C-B 222 nt3.42□□□□□ -1.86 RIP-Chip
NRD1P53617 YPR053CYPR053C 456 nt3.42□□□□□ -1.86
NRD1P53617 YPR108W-AYPR108W-A 213 nt3.42□□□□□ -1.86
NRD1P53617 RPA135YPR010C 3612 nt3.42□□□□□ -1.86
NRD1P53617 BCK2YER167W 2556 nt3.41□□□□□ -1.86
NRD1P53617 RAD26YJR035W 3258 nt3.41□□□□□ -1.86
NRD1P53617 RAM2YKL019W 951 nt3.41□□□□□ -1.86
NRD1P53617 SWC7YLR385C 399 nt3.41□□□□□ -1.86
NRD1P53617 YPR022CYPR022C 3402 nt3.41□□□□□ -1.86
NRD1P53617 PUF6YDR496C 1971 nt3.41□□□□□ -1.86
NRD1P53617 ZIP2YGL249W 2115 nt3.41□□□□□ -1.86
NRD1P53617 DAN4YJR151C 3486 nt3.4□□□□□ -1.86
NRD1P53617 YHR131W-AYHR131W-A 246 nt3.4□□□□□ -1.87
NRD1P53617 RSF2YJR127C 4143 nt3.4□□□□□ -1.87
NRD1P53617 LCL1YPL056C 306 nt3.4□□□□□ -1.87 RIP-Chip
NRD1P53617 YPR146CYPR146C 330 nt3.4□□□□□ -1.87
NRD1P53617 YBR221W-AYBR221W-A 105 nt3.4□□□□□ -1.87
NRD1P53617 HOS4YIL112W 3252 nt3.4□□□□□ -1.87
NRD1P53617 SPA2YLL021W 4401 nt3.39□□□□□ -1.87
NRD1P53617 HUL5YGL141W 2733 nt3.39□□□□□ -1.87
NRD1P53617 LCB5YLR260W 2064 nt3.39□□□□□ -1.87
NRD1P53617 MES1YGR264C 2256 nt3.39□□□□□ -1.87
NRD1P53617 YDR521WYDR521W 336 nt3.39□□□□□ -1.87
NRD1P53617 RPS18BYML026C 441 nt3.39□□□□□ -1.87
NRD1P53617 YIL166CYIL166C 1629 nt3.39□□□□□ -1.87
NRD1P53617 PDC2YDR081C 2778 nt3.39□□□□□ -1.87
NRD1P53617 snR75snR75 89 nt3.38□□□□□ -1.87
NRD1P53617 YDR182W-AYDR182W-A 204 nt3.38□□□□□ -1.87
NRD1P53617 tV(CAC)DtV(CAC)D 73 nt3.38□□□□□ -1.87
NRD1P53617 tV(CAC)HtV(CAC)H 73 nt3.38□□□□□ -1.87
NRD1P53617 YMR122W-AYMR122W-A 255 nt3.38□□□□□ -1.87
NRD1P53617 snR53snR53 91 nt3.38□□□□□ -1.87
NRD1P53617 ROG1YGL144C 2058 nt3.38□□□□□ -1.87
NRD1P53617 MDN1YLR106C 14733 nt3.38□□□□□ -1.87
NRD1P53617 ISW2YOR304W 3363 nt3.38□□□□□ -1.87
NRD1P53617 SEC63YOR254C 1992 nt3.38□□□□□ -1.87
NRD1P53617 VAC14YLR386W 2643 nt3.38□□□□□ -1.87
NRD1P53617 YLR352WYLR352W 2424 nt3.38□□□□□ -1.87
NRD1P53617 RDH54YBR073W 2877 nt3.37□□□□□ -1.87
NRD1P53617 PBS2YJL128C 2007 nt3.37□□□□□ -1.87
NRD1P53617 PEX6YNL329C 3093 nt3.37□□□□□ -1.87
NRD1P53617 SOM1YEL059C-A 225 nt3.37□□□□□ -1.87
NRD1P53617 tL(UAA)QtL(UAA)Q 85 nt3.37□□□□□ -1.87
NRD1P53617 STF2YGR008C 255 nt3.37□□□□□ -1.87 RIP-Chip
NRD1P53617 RPL38YLR325C 237 nt3.37□□□□□ -1.87
NRD1P53617 YBR206WYBR206W 324 nt3.37□□□□□ -1.87
NRD1P53617 AKR1YDR264C 2295 nt3.37□□□□□ -1.87
NRD1P53617 SEG1YMR086W 2883 nt3.36□□□□□ -1.87 RIP-Chip
NRD1P53617 RCO1YMR075W 2055 nt3.36□□□□□ -1.87
NRD1P53617 YDL118WYDL118W 381 nt3.36□□□□□ -1.87
NRD1P53617 YDR464C-AYDR464C-A 189 nt3.36□□□□□ -1.87
NRD1P53617 SPT4YGR063C 309 nt3.36□□□□□ -1.87
NRD1P53617 YIL059CYIL059C 366 nt3.36□□□□□ -1.87
NRD1P53617 CDC31YOR257W 486 nt3.36□□□□□ -1.87
NRD1P53617 FAA1YOR317W 2103 nt3.36□□□□□ -1.87
NRD1P53617 DAP2YHR028C 2457 nt3.36□□□□□ -1.87
NRD1P53617 APC5YOR249C 2058 nt3.35□□□□□ -1.87
NRD1P53617 APC2YLR127C 2562 nt3.35□□□□□ -1.87
NRD1P53617 ARO1YDR127W 4767 nt3.35□□□□□ -1.87
NRD1P53617 YGL063C-AYGL063C-A 150 nt3.35□□□□□ -1.87
NRD1P53617 ANB1YJR047C 474 nt3.35□□□□□ -1.87
NRD1P53617 YLR255CYLR255C 354 nt3.35□□□□□ -1.87
NRD1P53617 PRM15YMR278W 1869 nt3.35□□□□□ -1.87 RIP-Chip
NRD1P53617 ARK1YNL020C 1917 nt3.34□□□□□ -1.87 RIP-Chip
NRD1P53617 MTR4YJL050W 3222 nt3.34□□□□□ -1.87
NRD1P53617 GYP7YDL234C 2241 nt3.34□□□□□ -1.87
NRD1P53617 MCD4YKL165C 2760 nt3.34□□□□□ -1.87
NRD1P53617 PKH1YDR490C 2301 nt3.34□□□□□ -1.87
NRD1P53617 PIN4YBL051C 2007 nt3.34□□□□□ -1.88
NRD1P53617 HEH2YDR458C 1992 nt3.33□□□□□ -1.88
NRD1P53617 PRE4YFR050C 801 nt3.33□□□□□ -1.88
NRD1P53617 YOR019WYOR019W 2193 nt3.33□□□□□ -1.88
NRD1P53617 AHC1YOR023C 1701 nt3.33□□□□□ -1.88
NRD1P53617 UTP8YGR128C 2142 nt3.32□□□□□ -1.88
NRD1P53617 tK(UUU)DtK(UUU)D 73 nt3.32□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 10.1 ms