Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 MPS1YDL028C 2295 nt3.19□□□□□ -1.9
DEF1P35732 CHS2YBR038W 2892 nt3.19□□□□□ -1.9
DEF1P35732 VIP1YLR410W 3441 nt3.19□□□□□ -1.9
DEF1P35732 ISW1YBR245C 3390 nt3.18□□□□□ -1.9
DEF1P35732 JJJ2YJL162C 1752 nt3.18□□□□□ -1.9
DEF1P35732 SMY2YBR172C 2223 nt3.18□□□□□ -1.9
DEF1P35732 RSM19YNR037C 276 nt3.18□□□□□ -1.9
DEF1P35732 YOR072W-AYOR072W-A 249 nt3.18□□□□□ -1.9
DEF1P35732 NAN1YPL126W 2691 nt3.18□□□□□ -1.9
DEF1P35732 YDR034C-DYDR034C-D 5313 nt3.18□□□□□ -1.9
DEF1P35732 YDR210W-BYDR210W-B 5313 nt3.18□□□□□ -1.9
DEF1P35732 YLR410W-BYLR410W-B 5313 nt3.18□□□□□ -1.9
DEF1P35732 SLP1YOR154W 1764 nt3.17□□□□□ -1.9
DEF1P35732 NUM1YDR150W 8247 nt3.17□□□□□ -1.9
DEF1P35732 DIA2YOR080W 2199 nt3.17□□□□□ -1.9
DEF1P35732 RPL14BYHL001W 417 nt3.17□□□□□ -1.9
DEF1P35732 tT(UGU)Q1tT(UGU)Q1 76 nt3.17□□□□□ -1.9
DEF1P35732 RPL40AYIL148W 387 nt3.17□□□□□ -1.9
DEF1P35732 PHS1YJL097W 654 nt3.17□□□□□ -1.9
DEF1P35732 YJL150WYJL150W 303 nt3.17□□□□□ -1.9
DEF1P35732 TIM8YJR135W-A 264 nt3.17□□□□□ -1.9
DEF1P35732 GOT1YMR292W 417 nt3.17□□□□□ -1.9
DEF1P35732 RPL23AYBL087C 414 nt3.17□□□□□ -1.9
DEF1P35732 YOR008C-AYOR008C-A 225 nt3.17□□□□□ -1.9
DEF1P35732 YLL032CYLL032C 2478 nt3.17□□□□□ -1.9
DEF1P35732 TOP2YNL088W 4287 nt3.17□□□□□ -1.9
DEF1P35732 REC8YPR007C 2043 nt3.17□□□□□ -1.9
DEF1P35732 VPS41YDR080W 2979 nt3.16□□□□□ -1.9
DEF1P35732 YHR080CYHR080C 4038 nt3.16□□□□□ -1.9
DEF1P35732 YOR073W-AYOR073W-A 234 nt3.16□□□□□ -1.9
DEF1P35732 MF(ALPHA)1YPL187W 498 nt3.16□□□□□ -1.9
DEF1P35732 snR48snR48 113 nt3.16□□□□□ -1.9
DEF1P35732 REV1YOR346W 2958 nt3.15□□□□□ -1.9
DEF1P35732 RED1YLR263W 2484 nt3.15□□□□□ -1.9
DEF1P35732 MVP1YMR004W 1536 nt3.15□□□□□ -1.9
DEF1P35732 snR55snR55 98 nt3.15□□□□□ -1.91
DEF1P35732 YDL011CYDL011C 324 nt3.15□□□□□ -1.91
DEF1P35732 MZM1YDR493W 372 nt3.15□□□□□ -1.91
DEF1P35732 SAK1YER129W 3429 nt3.15□□□□□ -1.91
DEF1P35732 ECM29YHL030W 5607 nt3.15□□□□□ -1.91
DEF1P35732 RPS24AYER074W 408 nt3.14□□□□□ -1.91
DEF1P35732 YER088C-AYER088C-A 324 nt3.14□□□□□ -1.91
DEF1P35732 YGR174W-AYGR174W-A 87 nt3.14□□□□□ -1.91
DEF1P35732 YMR194C-AYMR194C-A 225 nt3.14□□□□□ -1.91
DEF1P35732 HEM4YOR278W 828 nt3.14□□□□□ -1.91
DEF1P35732 TPS2YDR074W 2691 nt3.14□□□□□ -1.91
DEF1P35732 PHO2YDL106C 1680 nt3.14□□□□□ -1.91
DEF1P35732 SWR1YDR334W 4545 nt3.14□□□□□ -1.91
DEF1P35732 SIR3YLR442C 2937 nt3.13□□□□□ -1.91
DEF1P35732 PFF1YBR074W 2931 nt3.13□□□□□ -1.91
DEF1P35732 VPS52YDR484W 1926 nt3.13□□□□□ -1.91
DEF1P35732 YDL176WYDL176W 2127 nt3.13□□□□□ -1.91
DEF1P35732 SCW11YGL028C 1629 nt3.13□□□□□ -1.91
DEF1P35732 YLR342W-AYLR342W-A 174 nt3.13□□□□□ -1.91
DEF1P35732 YOR302WYOR302W 78 nt3.13□□□□□ -1.91
DEF1P35732 ORC2YBR060C 1863 nt3.13□□□□□ -1.91
DEF1P35732 tC(GCA)BtC(GCA)B 72 nt3.12□□□□□ -1.91
DEF1P35732 tC(GCA)GtC(GCA)G 72 nt3.12□□□□□ -1.91
DEF1P35732 tC(GCA)P1tC(GCA)P1 72 nt3.12□□□□□ -1.91
DEF1P35732 tC(GCA)P2tC(GCA)P2 72 nt3.12□□□□□ -1.91
DEF1P35732 YIL032CYIL032C 357 nt3.12□□□□□ -1.91
DEF1P35732 YJL135WYJL135W 318 nt3.12□□□□□ -1.91
DEF1P35732 COA4YLR218C 453 nt3.12□□□□□ -1.91
DEF1P35732 HTB2YBL002W 396 nt3.12□□□□□ -1.91
DEF1P35732 RPL36BYPL249C-A 303 nt3.12□□□□□ -1.91
DEF1P35732 FAA2YER015W 2235 nt3.12□□□□□ -1.91
DEF1P35732 DYN1YKR054C 12279 nt3.12□□□□□ -1.91
DEF1P35732 NOP4YPL043W 2058 nt3.12□□□□□ -1.91
DEF1P35732 CIN8YEL061C 3003 nt3.11□□□□□ -1.91
DEF1P35732 RGR1YLR071C 3249 nt3.11□□□□□ -1.91
DEF1P35732 TSA2YDR453C 591 nt3.11□□□□□ -1.91
DEF1P35732 AIM11YER093C-A 414 nt3.11□□□□□ -1.91
DEF1P35732 COX23YHR116W 456 nt3.11□□□□□ -1.91
DEF1P35732 YIL102CYIL102C 306 nt3.11□□□□□ -1.91
DEF1P35732 YKR033CYKR033C 426 nt3.11□□□□□ -1.91
DEF1P35732 YEF3YLR249W 3135 nt3.11□□□□□ -1.91
DEF1P35732 YKU70YMR284W 1809 nt3.11□□□□□ -1.91
DEF1P35732 MUS81YDR386W 1899 nt3.11□□□□□ -1.91
DEF1P35732 GCD6YDR211W 2139 nt3.1□□□□□ -1.91
DEF1P35732 PRP39YML046W 1890 nt3.1□□□□□ -1.91
DEF1P35732 tF(GAA)DtF(GAA)D 73 nt3.1□□□□□ -1.91
DEF1P35732 tF(GAA)NtF(GAA)N 73 nt3.1□□□□□ -1.91
DEF1P35732 YGL052WYGL052W 306 nt3.1□□□□□ -1.91
DEF1P35732 HSK3YKL138C-A 210 nt3.1□□□□□ -1.91
DEF1P35732 SRL3YKR091W 741 nt3.1□□□□□ -1.91
DEF1P35732 YMR141W-AYMR141W-A 225 nt3.1□□□□□ -1.91
DEF1P35732 ISU1YPL135W 498 nt3.1□□□□□ -1.91
DEF1P35732 SWD3YBR175W 948 nt3.1□□□□□ -1.91
DEF1P35732 YBR197CYBR197C 654 nt3.1□□□□□ -1.91
DEF1P35732 PMR1YGL167C 2853 nt3.1□□□□□ -1.91
DEF1P35732 SSY1YDR160W 2559 nt3.1□□□□□ -1.91
DEF1P35732 ARK1YNL020C 1917 nt3.09□□□□□ -1.91
DEF1P35732 TRZ1YKR079C 2517 nt3.09□□□□□ -1.91
DEF1P35732 GPG1YGL121C 381 nt3.09□□□□□ -1.91
DEF1P35732 YHL042WYHL042W 453 nt3.09□□□□□ -1.91
DEF1P35732 TMA22YJR014W 597 nt3.09□□□□□ -1.91
DEF1P35732 ATP15YPL271W 189 nt3.09□□□□□ -1.91
DEF1P35732 MSS11YMR164C 2277 nt3.09□□□□□ -1.92
DEF1P35732 COG8YML071C 1824 nt3.09□□□□□ -1.92
DEF1P35732 STN1YDR082W 1485 nt3.09□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms