Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AC010980.2-201ENST00000587099 1412 ntBASIC17.75■□□□□ 0.43
CCL2P13500 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL2P13500 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CCL2P13500 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.75■□□□□ 0.43
CCL2P13500 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCL2P13500 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCL2P13500 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CCL2P13500 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCL2P13500 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.74■□□□□ 0.43
CCL2P13500 MKRN4P-201ENST00000444706 1521 ntBASIC17.74■□□□□ 0.43
CCL2P13500 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.74■□□□□ 0.43
CCL2P13500 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCL2P13500 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 GPX1P1-201ENST00000388829 606 ntBASIC17.74■□□□□ 0.43
CCL2P13500 NCF1B-203ENST00000435988 1254 ntBASIC17.74■□□□□ 0.43
CCL2P13500 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.74■□□□□ 0.43
CCL2P13500 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.74■□□□□ 0.43
CCL2P13500 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.74■□□□□ 0.43
CCL2P13500 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCL2P13500 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.74■□□□□ 0.43
CCL2P13500 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.74■□□□□ 0.43
CCL2P13500 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCL2P13500 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCL2P13500 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.74■□□□□ 0.43
CCL2P13500 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL2P13500 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.73■□□□□ 0.43
CCL2P13500 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.73■□□□□ 0.43
CCL2P13500 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCL2P13500 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.73■□□□□ 0.43
CCL2P13500 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCL2P13500 MIR2861-201ENST00000636310 90 ntBASIC17.73■□□□□ 0.43
CCL2P13500 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.73■□□□□ 0.43
CCL2P13500 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.73■□□□□ 0.43
CCL2P13500 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL2P13500 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.72■□□□□ 0.43
CCL2P13500 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCL2P13500 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL2P13500 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.72■□□□□ 0.43
CCL2P13500 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCL2P13500 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 MCRIP2P1-201ENST00000394346 511 ntBASIC17.72■□□□□ 0.43
CCL2P13500 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL2P13500 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL2P13500 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.72■□□□□ 0.43
CCL2P13500 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL2P13500 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.72■□□□□ 0.43
CCL2P13500 AL109923.1-201ENST00000618799 583 ntBASIC17.72■□□□□ 0.43
CCL2P13500 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCL2P13500 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 AC092667.1-201ENST00000434301 2586 ntBASIC17.72■□□□□ 0.43
CCL2P13500 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.72■□□□□ 0.43
CCL2P13500 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL2P13500 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CCL2P13500 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.71■□□□□ 0.43
CCL2P13500 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms