Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 SDC25YLL016W 3147 nt2.24□□□□□ -2.05
CAF40P53829 PES4YFR023W 1836 nt2.24□□□□□ -2.05
CAF40P53829 NAB3YPL190C 2409 nt2.23□□□□□ -2.05
CAF40P53829 TOF1YNL273W 3717 nt2.23□□□□□ -2.05
CAF40P53829 GPI8YDR331W 1236 nt2.23□□□□□ -2.05
CAF40P53829 SUP56tL(CAA)A 82 nt2.23□□□□□ -2.05
CAF40P53829 SUP53tL(CAA)C 82 nt2.23□□□□□ -2.05
CAF40P53829 tL(CAA)DtL(CAA)D 82 nt2.23□□□□□ -2.05
CAF40P53829 tL(CAA)G1tL(CAA)G1 82 nt2.23□□□□□ -2.05
CAF40P53829 SUP54tL(CAA)G2 82 nt2.23□□□□□ -2.05
CAF40P53829 tL(CAA)G3tL(CAA)G3 82 nt2.23□□□□□ -2.05
CAF40P53829 tL(CAA)KtL(CAA)K 82 nt2.23□□□□□ -2.05
CAF40P53829 tL(CAA)LtL(CAA)L 82 nt2.23□□□□□ -2.05
CAF40P53829 tL(CAA)MtL(CAA)M 82 nt2.23□□□□□ -2.05
CAF40P53829 tL(CAA)NtL(CAA)N 82 nt2.23□□□□□ -2.05
CAF40P53829 UBC7YMR022W 498 nt2.23□□□□□ -2.05
CAF40P53829 YOR392WYOR392W 444 nt2.23□□□□□ -2.05
CAF40P53829 YPL276WYPL276W 438 nt2.23□□□□□ -2.05
CAF40P53829 ECM25YJL201W 1800 nt2.23□□□□□ -2.05
CAF40P53829 SSY1YDR160W 2559 nt2.22□□□□□ -2.05
CAF40P53829 snR76snR76 109 nt2.22□□□□□ -2.05
CAF40P53829 ATG31YDR022C 591 nt2.22□□□□□ -2.05
CAF40P53829 YDR524W-CYDR524W-C 90 nt2.22□□□□□ -2.05
CAF40P53829 PAU10YDR542W 363 nt2.22□□□□□ -2.05
CAF40P53829 PAU11YGL261C 363 nt2.22□□□□□ -2.05
CAF40P53829 YGR107WYGR107W 450 nt2.22□□□□□ -2.05
CAF40P53829 PEX4YGR133W 552 nt2.22□□□□□ -2.05
CAF40P53829 RPL40AYIL148W 387 nt2.22□□□□□ -2.05
CAF40P53829 PET191YJR034W 327 nt2.22□□□□□ -2.05
CAF40P53829 CCW14YLR390W-A 717 nt2.22□□□□□ -2.05
CAF40P53829 PAU4YLR461W 363 nt2.22□□□□□ -2.05
CAF40P53829 RPL36AYMR194W 303 nt2.22□□□□□ -2.05
CAF40P53829 ZEO1YOL109W 342 nt2.22□□□□□ -2.05
CAF40P53829 ERP4YOR016C 624 nt2.22□□□□□ -2.05
CAF40P53829 YOR105WYOR105W 327 nt2.22□□□□□ -2.05
CAF40P53829 VMA9YCL005W-A 222 nt2.22□□□□□ -2.05
CAF40P53829 YOL098CYOL098C 3114 nt2.22□□□□□ -2.05
CAF40P53829 AMS1YGL156W 3252 nt2.22□□□□□ -2.05
CAF40P53829 NUP82YJL061W 2142 nt2.21□□□□□ -2.06
CAF40P53829 BRO1YPL084W 2535 nt2.21□□□□□ -2.06
CAF40P53829 AAD16YFL057C 459 nt2.21□□□□□ -2.06
CAF40P53829 tT(UGU)Q1tT(UGU)Q1 76 nt2.21□□□□□ -2.06
CAF40P53829 YAL068W-AYAL068W-A 255 nt2.21□□□□□ -2.06
CAF40P53829 YAR047CYAR047C 321 nt2.21□□□□□ -2.06
CAF40P53829 EGD1YPL037C 474 nt2.21□□□□□ -2.06
CAF40P53829 VPS13YLL040C 9435 nt2.21□□□□□ -2.06
CAF40P53829 NIC96YFR002W 2520 nt2.2□□□□□ -2.06
CAF40P53829 YER189WYER189W 369 nt2.2□□□□□ -2.06
CAF40P53829 YGR050CYGR050C 357 nt2.2□□□□□ -2.06
CAF40P53829 YHR214W-AYHR214W-A 486 nt2.2□□□□□ -2.06
CAF40P53829 YLR031WYLR031W 561 nt2.2□□□□□ -2.06
CAF40P53829 YAR068WYAR068W 486 nt2.2□□□□□ -2.06
CAF40P53829 YLR458WYLR458W 381 nt2.2□□□□□ -2.06
CAF40P53829 AIM32YML050W 936 nt2.2□□□□□ -2.06
CAF40P53829 COX7YMR256C 183 nt2.2□□□□□ -2.06
CAF40P53829 YOR053WYOR053W 342 nt2.2□□□□□ -2.06
CAF40P53829 FAR11YNL127W 2862 nt2.2□□□□□ -2.06
CAF40P53829 RGA2YDR379W 3030 nt2.19□□□□□ -2.06
CAF40P53829 RPL27BYDR471W 411 nt2.19□□□□□ -2.06
CAF40P53829 SDH7YDR511W 402 nt2.19□□□□□ -2.06
CAF40P53829 ERP6YGL002W 651 nt2.19□□□□□ -2.06
CAF40P53829 YJL202CYJL202C 348 nt2.19□□□□□ -2.06
CAF40P53829 RPS22BYLR367W 393 nt2.19□□□□□ -2.06
CAF40P53829 RPS29AYLR388W 171 nt2.19□□□□□ -2.06
CAF40P53829 YOR073W-AYOR073W-A 234 nt2.19□□□□□ -2.06
CAF40P53829 PSK2YOL045W 3306 nt2.19□□□□□ -2.06
CAF40P53829 SPC72YAL047C 1869 nt2.18□□□□□ -2.06
CAF40P53829 YDL068WYDL068W 330 nt2.18□□□□□ -2.06
CAF40P53829 CBS1YDL069C 690 nt2.18□□□□□ -2.06
CAF40P53829 YDR090CYDR090C 933 nt2.18□□□□□ -2.06
CAF40P53829 YER068C-AYER068C-A 432 nt2.18□□□□□ -2.06
CAF40P53829 RPL23BYER117W 414 nt2.18□□□□□ -2.06
CAF40P53829 YHL046W-AYHL046W-A 327 nt2.18□□□□□ -2.06
CAF40P53829 RAM2YKL019W 951 nt2.18□□□□□ -2.06
CAF40P53829 YKL033W-AYKL033W-A 711 nt2.18□□□□□ -2.06
CAF40P53829 YKL066WYKL066W 444 nt2.18□□□□□ -2.06
CAF40P53829 YKL165C-AYKL165C-A 234 nt2.18□□□□□ -2.06
CAF40P53829 SEC22YLR268W 645 nt2.18□□□□□ -2.06
CAF40P53829 YLR434CYLR434C 384 nt2.18□□□□□ -2.06
CAF40P53829 YBR197CYBR197C 654 nt2.18□□□□□ -2.06
CAF40P53829 VPS52YDR484W 1926 nt2.18□□□□□ -2.06
CAF40P53829 IRC8YJL051W 2469 nt2.17□□□□□ -2.06
CAF40P53829 YDL041WYDL041W 354 nt2.17□□□□□ -2.06
CAF40P53829 RNP1YLL046C 750 nt2.17□□□□□ -2.06
CAF40P53829 CRS5YOR031W 210 nt2.17□□□□□ -2.06
CAF40P53829 YBR012CYBR012C 420 nt2.17□□□□□ -2.06
CAF40P53829 MGR1YCL044C 1254 nt2.17□□□□□ -2.06
CAF40P53829 YJL016WYJL016W 1686 nt2.17□□□□□ -2.06
CAF40P53829 MCD1YDL003W 1701 nt2.17□□□□□ -2.06
CAF40P53829 STH1YIL126W 4080 nt2.17□□□□□ -2.06
CAF40P53829 MKT1YNL085W 2493 nt2.16□□□□□ -2.06
CAF40P53829 HRD3YLR207W 2502 nt2.16□□□□□ -2.06
CAF40P53829 ATP17YDR377W 306 nt2.16□□□□□ -2.06
CAF40P53829 DNF1YER166W 4716 nt2.16□□□□□ -2.06
CAF40P53829 YBL005W-BYBL005W-B 5268 nt2.16□□□□□ -2.06
CAF40P53829 INP51YIL002C 2841 nt2.15□□□□□ -2.06
CAF40P53829 KRE33YNL132W 3171 nt2.15□□□□□ -2.06
CAF40P53829 SWT1YOR166C 1377 nt2.15□□□□□ -2.07
CAF40P53829 RRP12YPL012W 3687 nt2.15□□□□□ -2.07
CAF40P53829 RPS24BYIL069C 408 nt2.15□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 146.1 ms